RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 PLCB2Q00722 1185 aa18.1■□□□□ 0.49
RAPGEF1-202ENST00000372190 DCAF11Q8TEB1 546 aa18.08■□□□□ 0.48
RAPGEF1-202ENST00000372190 PODXL2Q9NZ53 605 aa18.07■□□□□ 0.48
RAPGEF1-202ENST00000372190 SRPK2P78362 688 aaKnown RBP18.06■□□□□ 0.48
RAPGEF1-202ENST00000372190 PTPRGP23470 1445 aa18.06■□□□□ 0.48
RAPGEF1-202ENST00000372190 KIF3BO15066 747 aa18.06■□□□□ 0.48
RAPGEF1-202ENST00000372190 SAFB2Q14151 953 aaKnown RBP eCLIP18.06■□□□□ 0.48
RAPGEF1-202ENST00000372190 MYH16Q9H6N6 1097 aa18.06■□□□□ 0.48
RAPGEF1-202ENST00000372190 NPHP1O15259 732 aa18.05■□□□□ 0.48
RAPGEF1-202ENST00000372190 SPAG9O60271 1321 aaKnown RBP18.05■□□□□ 0.48
RAPGEF1-202ENST00000372190 STK26Q9P289 416 aa18.05■□□□□ 0.48
RAPGEF1-202ENST00000372190 EID1Q9Y6B2 187 aa18.05■□□□□ 0.48
RAPGEF1-202ENST00000372190 HNRNPMP52272 730 aaKnown RBP eCLIP18.04■□□□□ 0.484e-6■■■□□ 16.5
RAPGEF1-202ENST00000372190 ARID3AQ99856 593 aa18.04■□□□□ 0.48
RAPGEF1-202ENST00000372190 FHOD3Q2V2M9 1422 aa18.03■□□□□ 0.48
RAPGEF1-202ENST00000372190 RSPH6AQ9H0K4 717 aa18.03■□□□□ 0.48
RAPGEF1-202ENST00000372190 NUDCQ9Y266 331 aa18.02■□□□□ 0.48
RAPGEF1-202ENST00000372190 ANKRD30AQ9BXX3 1397 aa18.02■□□□□ 0.48
RAPGEF1-202ENST00000372190 GOLGA6L1Q8N7Z2 621 aa18.02■□□□□ 0.48
RAPGEF1-202ENST00000372190 WASHC2CQ9Y4E1 1318 aa18.01■□□□□ 0.47
RAPGEF1-202ENST00000372190 SOX12O15370 315 aa18.01■□□□□ 0.47
RAPGEF1-202ENST00000372190 MAPK8IP3Q9UPT6 1336 aa18.01■□□□□ 0.47
RAPGEF1-202ENST00000372190 CCDC18Q5T9S5 1454 aa18■□□□□ 0.47
RAPGEF1-202ENST00000372190 VPS8Q8N3P4 1428 aa18■□□□□ 0.47
RAPGEF1-202ENST00000372190 GAPVD1Q14C86 1478 aa17.99■□□□□ 0.47
RAPGEF1-202ENST00000372190 PKD2Q13563 968 aa17.99■□□□□ 0.47
RAPGEF1-202ENST00000372190 NCAPD3P42695 1498 aa17.98■□□□□ 0.47
RAPGEF1-202ENST00000372190 SIN3AQ96ST3 1273 aa17.98■□□□□ 0.47
RAPGEF1-202ENST00000372190 A0A0U1RQG5 324 aaPredicted RBP17.98■□□□□ 0.47
RAPGEF1-202ENST00000372190 TMF1P82094 1093 aa17.98■□□□□ 0.47
RAPGEF1-202ENST00000372190 FAM69CQ0P6D2 419 aa17.97■□□□□ 0.47
RAPGEF1-202ENST00000372190 PAK3O75914 559 aaPredicted RBP17.97■□□□□ 0.47
RAPGEF1-202ENST00000372190 FGD5Q6ZNL6 1462 aa17.96■□□□□ 0.47
RAPGEF1-202ENST00000372190 RSPH4AQ5TD94 716 aa17.96■□□□□ 0.47
RAPGEF1-202ENST00000372190 CC2D2AQ9P2K1 1620 aa17.96■□□□□ 0.46
RAPGEF1-202ENST00000372190 NUP155O75694 1391 aa17.95■□□□□ 0.46
RAPGEF1-202ENST00000372190 NOC3LQ8WTT2 800 aaKnown RBP17.94■□□□□ 0.46
RAPGEF1-202ENST00000372190 KIAA2012Q0VF49 1180 aa17.94■□□□□ 0.46
RAPGEF1-202ENST00000372190 RAD54L2Q9Y4B4 1467 aa17.93■□□□□ 0.46
RAPGEF1-202ENST00000372190 KANK4Q5T7N3 995 aaPredicted RBP17.93■□□□□ 0.46
RAPGEF1-202ENST00000372190 USP35Q9P2H5 1018 aa17.92■□□□□ 0.46
RAPGEF1-202ENST00000372190 U2SURPO15042 1029 aaKnown RBP17.92■□□□□ 0.46
RAPGEF1-202ENST00000372190 PKNOX2Q96KN3 472 aa17.91■□□□□ 0.46
RAPGEF1-202ENST00000372190 TPRNQ4KMQ1 711 aa17.91■□□□□ 0.46
RAPGEF1-202ENST00000372190 HDGFL2Q7Z4V5 671 aaPredicted RBP17.91■□□□□ 0.46
RAPGEF1-202ENST00000372190 NEUROD2Q15784 382 aa17.9■□□□□ 0.46
RAPGEF1-202ENST00000372190 CC2D1BQ5T0F9 858 aaKnown RBP17.9■□□□□ 0.46
RAPGEF1-202ENST00000372190 CCDC9Q9Y3X0 531 aaKnown RBP17.9■□□□□ 0.46
RAPGEF1-202ENST00000372190 AQRO60306 1485 aaKnown RBP eCLIP17.9■□□□□ 0.462e-6■■■■■ 32.2
RAPGEF1-202ENST00000372190 CASC1Q6TDU7 716 aa17.9■□□□□ 0.46
RAPGEF1-202ENST00000372190 SETD5Q9C0A6 1442 aa17.89■□□□□ 0.45
RAPGEF1-202ENST00000372190 DRC7Q8IY82 874 aa17.89■□□□□ 0.45
RAPGEF1-202ENST00000372190 SUPT16HQ9Y5B9 1047 aaKnown RBP17.89■□□□□ 0.45
RAPGEF1-202ENST00000372190 CSB-PGBD3P0DP91 1061 aa17.89■□□□□ 0.45
RAPGEF1-202ENST00000372190 FOXD1Q16676 465 aa17.87■□□□□ 0.45
RAPGEF1-202ENST00000372190 MRC2Q9UBG0 1479 aa17.87■□□□□ 0.45
RAPGEF1-202ENST00000372190 NUTM2DQ5VT03 806 aaPredicted RBP17.87■□□□□ 0.45
RAPGEF1-202ENST00000372190 HSP90AB1P08238 724 aaKnown RBP17.84■□□□□ 0.45
RAPGEF1-202ENST00000372190 PPP4R2Q9NY27 417 aa17.84■□□□□ 0.45
RAPGEF1-202ENST00000372190 MORC1Q86VD1 984 aa17.83■□□□□ 0.44
RAPGEF1-202ENST00000372190 MPHOSPH9Q99550 1183 aa17.81■□□□□ 0.44
RAPGEF1-202ENST00000372190 GOLGA6L3A6NEY3 463 aa17.81■□□□□ 0.44
RAPGEF1-202ENST00000372190 NESP48681 1621 aa17.8■□□□□ 0.44
RAPGEF1-202ENST00000372190 ZNF771Q7L3S4 317 aaPredicted RBP17.8■□□□□ 0.44
RAPGEF1-202ENST00000372190 ROCK2O75116 1388 aaKnown RBP17.79■□□□□ 0.44
RAPGEF1-202ENST00000372190 SENP3-EIF4A1A0A087X0R7 540 aa17.79■□□□□ 0.44
RAPGEF1-202ENST00000372190 GRIN2BQ13224 1484 aa17.79■□□□□ 0.44
RAPGEF1-202ENST00000372190 FTSJ3Q8IY81 847 aaKnown RBP17.78■□□□□ 0.44
RAPGEF1-202ENST00000372190 EIF3AQ14152 1382 aaKnown RBP17.77■□□□□ 0.44
RAPGEF1-202ENST00000372190 GOLGA6L4A6NEF3 574 aa17.77■□□□□ 0.43
RAPGEF1-202ENST00000372190 NGDNQ8NEJ9 315 aaKnown RBP17.77■□□□□ 0.43
RAPGEF1-202ENST00000372190 RTF1Q92541 710 aaKnown RBP17.76■□□□□ 0.43
RAPGEF1-202ENST00000372190 PRDM2Q13029 1718 aa17.75■□□□□ 0.43
RAPGEF1-202ENST00000372190 IFT140Q96RY7 1462 aa17.75■□□□□ 0.43
RAPGEF1-202ENST00000372190 TULP1O00294 542 aaPredicted RBP17.73■□□□□ 0.43
RAPGEF1-202ENST00000372190 IGF1RP08069 1367 aa17.72■□□□□ 0.43
RAPGEF1-202ENST00000372190 HSCBQ8IWL3 235 aa17.72■□□□□ 0.43
RAPGEF1-202ENST00000372190 NUTM2FA1L443 756 aa17.7■□□□□ 0.42
RAPGEF1-202ENST00000372190 RUSC2Q8N2Y8 1516 aa17.69■□□□□ 0.42
RAPGEF1-202ENST00000372190 GOLGA2Q08379 1002 aa17.69■□□□□ 0.42
RAPGEF1-202ENST00000372190 STK11IPQ8N1F8 1099 aa17.69■□□□□ 0.42
RAPGEF1-202ENST00000372190 PRKCSHP14314 528 aaPredicted RBP17.69■□□□□ 0.42
RAPGEF1-202ENST00000372190 TIMELESSQ9UNS1 1208 aa17.69■□□□□ 0.42
RAPGEF1-202ENST00000372190 OS9Q13438 667 aaPredicted RBP17.68■□□□□ 0.42
RAPGEF1-202ENST00000372190 PRG4Q92954 1404 aaPredicted RBP17.68■□□□□ 0.42
RAPGEF1-202ENST00000372190 NOM1Q5C9Z4 860 aaKnown RBP17.68■□□□□ 0.42
RAPGEF1-202ENST00000372190 TERF2IPQ9NYB0 399 aa17.68■□□□□ 0.42
RAPGEF1-202ENST00000372190 RAB3GAP2Q9H2M9 1393 aa17.67■□□□□ 0.42
RAPGEF1-202ENST00000372190 CFTRP13569 1480 aa17.66■□□□□ 0.42
RAPGEF1-202ENST00000372190 HMGXB3Q12766 1538 aa17.66■□□□□ 0.42
RAPGEF1-202ENST00000372190 MEX3CQ5U5Q3 659 aaKnown RBP17.65■□□□□ 0.42
RAPGEF1-202ENST00000372190 UACAQ9BZF9 1416 aa17.65■□□□□ 0.42
RAPGEF1-202ENST00000372190 HSPA5P11021 654 aaKnown RBP17.64■□□□□ 0.42
RAPGEF1-202ENST00000372190 GBP4Q96PP9 640 aa17.64■□□□□ 0.42
RAPGEF1-202ENST00000372190 ZNF330Q9Y3S2 320 aaPredicted RBP17.64■□□□□ 0.42
RAPGEF1-202ENST00000372190 RBM19Q9Y4C8 960 aaKnown RBP17.64■□□□□ 0.41
RAPGEF1-202ENST00000372190 FRAT1Q92837 279 aaPredicted RBP17.64■□□□□ 0.41
RAPGEF1-202ENST00000372190 VGFO15240 615 aaPredicted RBP17.63■□□□□ 0.41
RAPGEF1-202ENST00000372190 GPS2Q13227 327 aa17.63■□□□□ 0.41
RAPGEF1-202ENST00000372190 B4GALNT3Q6L9W6 998 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms