RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 DNAJC5Q9H3Z4 198 aa27.74■■■□□ 2.03
VEGFA-206ENST00000372077 PLCH2O75038 1416 aa27.74■■■□□ 2.03
VEGFA-206ENST00000372077 ZNF644Q9H582 1327 aaPredicted RBP27.73■■■□□ 2.03
VEGFA-206ENST00000372077 CAMSAP2Q08AD1 1489 aa27.72■■■□□ 2.03
VEGFA-206ENST00000372077 ARAP3Q8WWN8 1544 aa27.7■■■□□ 2.03
VEGFA-206ENST00000372077 ITGAEP38570 1179 aa27.69■■■□□ 2.02
VEGFA-206ENST00000372077 ARHGAP5Q13017 1502 aa27.68■■■□□ 2.02
VEGFA-206ENST00000372077 ZNF777Q9ULD5 760 aaPredicted RBP27.67■■■□□ 2.02
VEGFA-206ENST00000372077 PTPRKQ15262 1439 aa27.66■■■□□ 2.02
VEGFA-206ENST00000372077 SAMD9LQ8IVG5 1584 aa27.65■■■□□ 2.02
VEGFA-206ENST00000372077 DNMT1P26358 1616 aaKnown RBP27.64■■■□□ 2.02
VEGFA-206ENST00000372077 GLI2P10070 1586 aa27.63■■■□□ 2.01
VEGFA-206ENST00000372077 EFCAB2Q5VUJ9 269 aa27.62■■■□□ 2.01
VEGFA-206ENST00000372077 ABCC5O15440 1437 aa27.61■■■□□ 2.01
VEGFA-206ENST00000372077 DAPK1P53355 1430 aa27.61■■■□□ 2.01
VEGFA-206ENST00000372077 CD109Q6YHK3 1445 aa27.58■■■□□ 2.01
VEGFA-206ENST00000372077 PLEKHH2Q8IVE3 1493 aa27.58■■■□□ 2.01
VEGFA-206ENST00000372077 MBD5Q9P267 1494 aa27.58■■■□□ 2.01
VEGFA-206ENST00000372077 DIP2BQ9P265 1576 aa27.57■■■□□ 2
VEGFA-206ENST00000372077 KIAA1107Q9UPP5 1409 aa27.57■■■□□ 2
VEGFA-206ENST00000372077 ARHGEF5Q12774 1597 aa27.57■■■□□ 2
VEGFA-206ENST00000372077 MAP3K4Q9Y6R4 1608 aa27.54■■■□□ 2
VEGFA-206ENST00000372077 FANCAO15360 1455 aa27.54■■■□□ 2
VEGFA-206ENST00000372077 HNRNPMP52272 730 aaKnown RBP eCLIP27.53■■■□□ 21e-12■■■■■ 34.3
VEGFA-206ENST00000372077 RSPH4AQ5TD94 716 aa27.53■■■□□ 2
VEGFA-206ENST00000372077 ABCC1P33527 1531 aa27.52■■■□□ 2
VEGFA-206ENST00000372077 CROCC2H7BZ55 1655 aa27.52■■■□□ 2
VEGFA-206ENST00000372077 SYCP2Q9BX26 1530 aa27.52■■■□□ 2
VEGFA-206ENST00000372077 AKNAQ7Z591 1439 aa27.51■■□□□ 1.99
VEGFA-206ENST00000372077 ARHGEF12Q9NZN5 1544 aa27.5■■□□□ 1.99
VEGFA-206ENST00000372077 PELP1Q8IZL8 1130 aaKnown RBP27.5■■□□□ 1.99
VEGFA-206ENST00000372077 FAM69CQ0P6D2 419 aa27.49■■□□□ 1.99
VEGFA-206ENST00000372077 SHANK2Q9UPX8 1470 aa27.48■■□□□ 1.99
VEGFA-206ENST00000372077 SETD5Q9C0A6 1442 aa27.48■■□□□ 1.99
VEGFA-206ENST00000372077 ROCK1Q13464 1354 aa27.48■■□□□ 1.99
VEGFA-206ENST00000372077 CCDC141Q6ZP82 1450 aa27.48■■□□□ 1.99
VEGFA-206ENST00000372077 CCER1Q8TC90 406 aaPredicted RBP27.48■■□□□ 1.99
VEGFA-206ENST00000372077 HFM1A2PYH4 1435 aa27.48■■□□□ 1.99
VEGFA-206ENST00000372077 CHIC2Q9UKJ5 165 aa27.47■■□□□ 1.99
VEGFA-206ENST00000372077 CFAP74Q9C0B2 1584 aa27.47■■□□□ 1.99
VEGFA-206ENST00000372077 ADGRL2O95490 1459 aa27.45■■□□□ 1.98
VEGFA-206ENST00000372077 NAIPQ13075 1403 aa27.44■■□□□ 1.98
VEGFA-206ENST00000372077 ZEB1P37275 1124 aaPredicted RBP27.43■■□□□ 1.98
VEGFA-206ENST00000372077 KIF13AQ9H1H9 1805 aa27.42■■□□□ 1.98
VEGFA-206ENST00000372077 NEO1Q92859 1461 aa27.42■■□□□ 1.98
VEGFA-206ENST00000372077 ADGBQ8N7X0 1667 aa27.42■■□□□ 1.98
VEGFA-206ENST00000372077 TSPY4P0CV99 314 aa27.42■■□□□ 1.98
VEGFA-206ENST00000372077 TSPY10P0CW01 314 aa27.42■■□□□ 1.98
VEGFA-206ENST00000372077 RAB3GAP2Q9H2M9 1393 aa27.42■■□□□ 1.98
VEGFA-206ENST00000372077 C9orf84Q5VXU9 1444 aa27.42■■□□□ 1.98
VEGFA-206ENST00000372077 ADGRL1O94910 1474 aa27.41■■□□□ 1.98
VEGFA-206ENST00000372077 MAST1Q9Y2H9 1570 aa27.4■■□□□ 1.98
VEGFA-206ENST00000372077 NCOA1Q15788 1441 aa27.4■■□□□ 1.98
VEGFA-206ENST00000372077 TRAPPC8Q9Y2L5 1435 aa27.4■■□□□ 1.98
VEGFA-206ENST00000372077 RRP7BPQ9NSQ0 103 aa27.4■■□□□ 1.98
VEGFA-206ENST00000372077 GCC2Q8IWJ2 1684 aa27.39■■□□□ 1.98
VEGFA-206ENST00000372077 SCAPERQ9BY12 1400 aa27.39■■□□□ 1.97
VEGFA-206ENST00000372077 ANKRD30AQ9BXX3 1397 aa27.36■■□□□ 1.97
VEGFA-206ENST00000372077 PPRC1Q5VV67 1664 aaKnown RBP27.35■■□□□ 1.97
VEGFA-206ENST00000372077 AFAP1Q8N556 730 aa27.31■■□□□ 1.96
VEGFA-206ENST00000372077 TEX14Q8IWB6 1497 aa27.3■■□□□ 1.96
VEGFA-206ENST00000372077 RTEL1-TNFRSF6BF6WH68 1400 aa27.29■■□□□ 1.96
VEGFA-206ENST00000372077 TSPOAP1O95153 1857 aa27.29■■□□□ 1.96
VEGFA-206ENST00000372077 PLXNC1O60486 1568 aa27.27■■□□□ 1.96
VEGFA-206ENST00000372077 ZNF518AQ6AHZ1 1483 aa27.27■■□□□ 1.96
VEGFA-206ENST00000372077 POGZQ7Z3K3 1410 aa27.27■■□□□ 1.96
VEGFA-206ENST00000372077 KDM6BO15054 1643 aa27.26■■□□□ 1.96
VEGFA-206ENST00000372077 SPAG9O60271 1321 aaKnown RBP27.26■■□□□ 1.95
VEGFA-206ENST00000372077 KIF15Q9NS87 1388 aa27.24■■□□□ 1.95
VEGFA-206ENST00000372077 DENND4BO75064 1496 aaPredicted RBP27.24■■□□□ 1.95
VEGFA-206ENST00000372077 ZFYVE16Q7Z3T8 1539 aa27.24■■□□□ 1.95
VEGFA-206ENST00000372077 KDM5CP41229 1560 aa27.23■■□□□ 1.95
VEGFA-206ENST00000372077 INO80Q9ULG1 1556 aaPredicted RBP27.23■■□□□ 1.95
VEGFA-206ENST00000372077 DHX57Q6P158 1386 aaKnown RBP27.22■■□□□ 1.95
VEGFA-206ENST00000372077 ANKRD50Q9ULJ7 1429 aa27.2■■□□□ 1.95
VEGFA-206ENST00000372077 ATP7AQ04656 1500 aa27.2■■□□□ 1.94
VEGFA-206ENST00000372077 ACIN1Q9UKV3 1341 aaKnown RBP27.2■■□□□ 1.94
VEGFA-206ENST00000372077 RICTORQ6R327 1708 aa27.18■■□□□ 1.94
VEGFA-206ENST00000372077 MLH3Q9UHC1 1453 aa27.17■■□□□ 1.94
VEGFA-206ENST00000372077 DUOX2Q9NRD8 1548 aa27.16■■□□□ 1.94
VEGFA-206ENST00000372077 KIDINS220Q9ULH0 1771 aa27.15■■□□□ 1.94
VEGFA-206ENST00000372077 RAPGEF3O95398 923 aa27.15■■□□□ 1.94
VEGFA-206ENST00000372077 FRMPD1Q5SYB0 1578 aa27.13■■□□□ 1.93
VEGFA-206ENST00000372077 HECW2Q9P2P5 1572 aa27.12■■□□□ 1.93
VEGFA-206ENST00000372077 TRHP20396 242 aaPredicted RBP27.1■■□□□ 1.93
VEGFA-206ENST00000372077 ERBINQ96RT1 1412 aa27.1■■□□□ 1.93
VEGFA-206ENST00000372077 SCAF1Q9H7N4 1312 aaKnown RBP27.09■■□□□ 1.93
VEGFA-206ENST00000372077 ZMYM4Q5VZL5 1548 aa27.08■■□□□ 1.93
VEGFA-206ENST00000372077 CLSPNQ9HAW4 1339 aa27.07■■□□□ 1.92
VEGFA-206ENST00000372077 MYT1LQ9UL68 1186 aa27.07■■□□□ 1.92
VEGFA-206ENST00000372077 TRIM52Q96A61 297 aa27.06■■□□□ 1.92
VEGFA-206ENST00000372077 COL17A1Q9UMD9 1497 aaPredicted RBP27.06■■□□□ 1.92
VEGFA-206ENST00000372077 DHX29Q7Z478 1369 aaKnown RBP27.04■■□□□ 1.92
VEGFA-206ENST00000372077 ABCA6Q8N139 1617 aa27.02■■□□□ 1.92
VEGFA-206ENST00000372077 MAGI2Q86UL8 1455 aa27.01■■□□□ 1.91
VEGFA-206ENST00000372077 KDM5DQ9BY66 1539 aa27.01■■□□□ 1.91
VEGFA-206ENST00000372077 UNC13BO14795 1591 aa27■■□□□ 1.91
VEGFA-206ENST00000372077 A2MP01023 1474 aa26.99■■□□□ 1.91
VEGFA-206ENST00000372077 DIP2CQ9Y2E4 1556 aa26.99■■□□□ 1.91
VEGFA-206ENST00000372077 PZPP20742 1482 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms