RNA–Protein interactions for RNA: ENST00000370882.1

LRRC1-201, Transcript of leucine rich repeat containing 1, humanhuman

TSL 3 BASIC

Gene LRRC1, Length 808 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-201ENST00000370882 ADGRL1O94910 1474 aa36.52■■■■□ 3.44
LRRC1-201ENST00000370882 CCNB3Q8WWL7 1395 aa36.51■■■■□ 3.43
LRRC1-201ENST00000370882 LRRC9Q6ZRR7 1453 aa36.5■■■■□ 3.43
LRRC1-201ENST00000370882 RAPGEF3O95398 923 aa36.49■■■■□ 3.43
LRRC1-201ENST00000370882 GPATCH8Q9UKJ3 1502 aaKnown RBP36.49■■■■□ 3.43
LRRC1-201ENST00000370882 CDC42BPBQ9Y5S2 1711 aa36.47■■■■□ 3.43
LRRC1-201ENST00000370882 CDC42BPAQ5VT25 1732 aa36.46■■■■□ 3.43
LRRC1-201ENST00000370882 SCAPERQ9BY12 1400 aa36.46■■■■□ 3.43
LRRC1-201ENST00000370882 SUPT6HQ7KZ85 1726 aaKnown RBP36.44■■■■□ 3.42
LRRC1-201ENST00000370882 FRMPD1Q5SYB0 1578 aa36.41■■■■□ 3.42
LRRC1-201ENST00000370882 NCOA2Q15596 1464 aa36.4■■■■□ 3.42
LRRC1-201ENST00000370882 CFDP1Q9UEE9 299 aaPredicted RBP36.4■■■■□ 3.42
LRRC1-201ENST00000370882 POGZQ7Z3K3 1410 aa36.4■■■■□ 3.42
LRRC1-201ENST00000370882 RICTORQ6R327 1708 aa36.39■■■■□ 3.42
LRRC1-201ENST00000370882 KANK4Q5T7N3 995 aaPredicted RBP36.36■■■■□ 3.41
LRRC1-201ENST00000370882 ITSN2Q9NZM3 1697 aa36.35■■■■□ 3.41
LRRC1-201ENST00000370882 ZNF518AQ6AHZ1 1483 aa36.34■■■■□ 3.41
LRRC1-201ENST00000370882 ZMYM4Q5VZL5 1548 aa36.34■■■■□ 3.41
LRRC1-201ENST00000370882 ABCC1P33527 1531 aa36.33■■■■□ 3.41
LRRC1-201ENST00000370882 ZNF777Q9ULD5 760 aaPredicted RBP36.32■■■■□ 3.4
LRRC1-201ENST00000370882 MAGI2Q86UL8 1455 aa36.31■■■■□ 3.4
LRRC1-201ENST00000370882 PLEKHH2Q8IVE3 1493 aa36.31■■■■□ 3.4
LRRC1-201ENST00000370882 SAMD9LQ8IVG5 1584 aa36.27■■■■□ 3.4
LRRC1-201ENST00000370882 KIAA1107Q9UPP5 1409 aa36.25■■■■□ 3.39
LRRC1-201ENST00000370882 ARHGEF12Q9NZN5 1544 aa36.23■■■■□ 3.39
LRRC1-201ENST00000370882 AFAP1Q8N556 730 aa36.22■■■■□ 3.39
LRRC1-201ENST00000370882 ARHGEF40Q8TER5 1519 aa36.22■■■■□ 3.39
LRRC1-201ENST00000370882 KDM5CP41229 1560 aa36.22■■■■□ 3.39
LRRC1-201ENST00000370882 ZFYVE16Q7Z3T8 1539 aa36.2■■■■□ 3.39
LRRC1-201ENST00000370882 SYCP2Q9BX26 1530 aa36.19■■■■□ 3.38
LRRC1-201ENST00000370882 TRAPPC8Q9Y2L5 1435 aa36.18■■■■□ 3.38
LRRC1-201ENST00000370882 MYOM3Q5VTT5 1437 aa36.15■■■■□ 3.38
LRRC1-201ENST00000370882 HNRNPMP52272 730 aaKnown RBP eCLIP36.14■■■■□ 3.386e-7■■■■■ 28.6
LRRC1-201ENST00000370882 MLH3Q9UHC1 1453 aa36.13■■■■□ 3.37
LRRC1-201ENST00000370882 YEATS2Q9ULM3 1422 aa36.13■■■■□ 3.37
LRRC1-201ENST00000370882 ZNF644Q9H582 1327 aaPredicted RBP36.12■■■■□ 3.37
LRRC1-201ENST00000370882 HECW2Q9P2P5 1572 aa36.12■■■■□ 3.37
LRRC1-201ENST00000370882 MIA2Q96PC5 1412 aa36.12■■■■□ 3.37
LRRC1-201ENST00000370882 MYT1LQ9UL68 1186 aa36.1■■■■□ 3.37
LRRC1-201ENST00000370882 CAMSAP2Q08AD1 1489 aa36.09■■■■□ 3.37
LRRC1-201ENST00000370882 ATP10AO60312 1499 aa36.05■■■■□ 3.36
LRRC1-201ENST00000370882 MBD5Q9P267 1494 aa36.05■■■■□ 3.36
LRRC1-201ENST00000370882 RSPH4AQ5TD94 716 aa36.05■■■■□ 3.36
LRRC1-201ENST00000370882 SPAG9O60271 1321 aaKnown RBP36.05■■■■□ 3.36
LRRC1-201ENST00000370882 KDM4FA0A1W2PPD8 638 aa36.03■■■■□ 3.36
LRRC1-201ENST00000370882 ARID4BQ4LE39 1312 aaPredicted RBP36.02■■■■□ 3.36
LRRC1-201ENST00000370882 C9orf84Q5VXU9 1444 aa36.01■■■■□ 3.36
LRRC1-201ENST00000370882 AEBP2Q6ZN18 517 aaPredicted RBP35.98■■■■□ 3.35
LRRC1-201ENST00000370882 CCDC141Q6ZP82 1450 aa35.98■■■■□ 3.35
LRRC1-201ENST00000370882 DIP2CQ9Y2E4 1556 aa35.97■■■■□ 3.35
LRRC1-201ENST00000370882 KIDINS220Q9ULH0 1771 aa35.95■■■■□ 3.35
LRRC1-201ENST00000370882 ARHGEF5Q12774 1597 aa35.95■■■■□ 3.35
LRRC1-201ENST00000370882 ATP7AQ04656 1500 aa35.94■■■■□ 3.34
LRRC1-201ENST00000370882 ABCA6Q8N139 1617 aa35.94■■■■□ 3.34
LRRC1-201ENST00000370882 REREQ9P2R6 1566 aa35.93■■■■□ 3.34
LRRC1-201ENST00000370882 FGD6Q6ZV73 1430 aa35.93■■■■□ 3.34
LRRC1-201ENST00000370882 INO80Q9ULG1 1556 aaPredicted RBP35.93■■■■□ 3.34
LRRC1-201ENST00000370882 RTEL1-TNFRSF6BF6WH68 1400 aa35.91■■■■□ 3.34
LRRC1-201ENST00000370882 TSPY4P0CV99 314 aa35.88■■■■□ 3.33
LRRC1-201ENST00000370882 TSPY10P0CW01 314 aa35.88■■■■□ 3.33
LRRC1-201ENST00000370882 PTPN23Q9H3S7 1636 aa35.87■■■■□ 3.33
LRRC1-201ENST00000370882 BCORL1Q5H9F3 1711 aa35.86■■■■□ 3.33
LRRC1-201ENST00000370882 TCOF1Q13428 1488 aaKnown RBP35.85■■■■□ 3.33
LRRC1-201ENST00000370882 SIGLEC1Q9BZZ2 1709 aa35.82■■■■□ 3.32
LRRC1-201ENST00000370882 AGLP35573 1532 aa35.82■■■■□ 3.32
LRRC1-201ENST00000370882 ADAMTSL3P82987 1691 aa35.81■■■■□ 3.32
LRRC1-201ENST00000370882 A2MP01023 1474 aa35.77■■■■□ 3.32
LRRC1-201ENST00000370882 ADGBQ8N7X0 1667 aa35.75■■■■□ 3.31
LRRC1-201ENST00000370882 MAST1Q9Y2H9 1570 aa35.74■■■■□ 3.31
LRRC1-201ENST00000370882 PPARGC1BQ86YN6 1023 aaKnown RBP35.74■■■■□ 3.31
LRRC1-201ENST00000370882 MLECQ14165 292 aa35.73■■■■□ 3.31
LRRC1-201ENST00000370882 PLXNC1O60486 1568 aa35.72■■■■□ 3.31
LRRC1-201ENST00000370882 SHANK2Q9UPX8 1470 aa35.71■■■■□ 3.31
LRRC1-201ENST00000370882 MADDQ8WXG6 1647 aa35.7■■■■□ 3.31
LRRC1-201ENST00000370882 ABCC5O15440 1437 aa35.69■■■■□ 3.3
LRRC1-201ENST00000370882 DNMT1P26358 1616 aaKnown RBP35.68■■■■□ 3.3
LRRC1-201ENST00000370882 DAPK1P53355 1430 aa35.68■■■■□ 3.3
LRRC1-201ENST00000370882 DHX29Q7Z478 1369 aaKnown RBP35.68■■■■□ 3.3
LRRC1-201ENST00000370882 FAM50AQ14320 339 aaKnown RBP35.68■■■■□ 3.3
LRRC1-201ENST00000370882 PTPRMP28827 1452 aa35.64■■■■□ 3.3
LRRC1-201ENST00000370882 CROCC2H7BZ55 1655 aa35.63■■■■□ 3.29
LRRC1-201ENST00000370882 FER1L4A9Z1Z3 1794 aa35.6■■■■□ 3.29
LRRC1-201ENST00000370882 RIMS1Q86UR5 1692 aaKnown RBP35.58■■■■□ 3.29
LRRC1-201ENST00000370882 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.57■■■■□ 3.28
LRRC1-201ENST00000370882 ESF1Q9H501 851 aaKnown RBP35.57■■■■□ 3.28
LRRC1-201ENST00000370882 PPP6R1Q9UPN7 881 aa35.53■■■■□ 3.28
LRRC1-201ENST00000370882 ANKRD30AQ9BXX3 1397 aa35.52■■■■□ 3.28
LRRC1-201ENST00000370882 CNTLNQ9NXG0 1405 aa35.52■■■■□ 3.28
LRRC1-201ENST00000370882 KIF15Q9NS87 1388 aa35.51■■■■□ 3.28
LRRC1-201ENST00000370882 DUOX2Q9NRD8 1548 aa35.51■■■■□ 3.27
LRRC1-201ENST00000370882 KIF3BO15066 747 aa35.49■■■■□ 3.27
LRRC1-201ENST00000370882 GGT6Q6P531 493 aa35.49■■■■□ 3.27
LRRC1-201ENST00000370882 RRBP1Q9P2E9 1410 aaKnown RBP35.48■■■■□ 3.27
LRRC1-201ENST00000370882 CHIC2Q9UKJ5 165 aa35.47■■■■□ 3.27
LRRC1-201ENST00000370882 ADGRL2O95490 1459 aa35.47■■■■□ 3.27
LRRC1-201ENST00000370882 RRP7BPQ9NSQ0 103 aa35.46■■■■□ 3.27
LRRC1-201ENST00000370882 NCOA1Q15788 1441 aa35.46■■■■□ 3.27
LRRC1-201ENST00000370882 EIF2AK4Q9P2K8 1649 aaKnown RBP35.44■■■■□ 3.26
LRRC1-201ENST00000370882 ERBINQ96RT1 1412 aa35.43■■■■□ 3.26
LRRC1-201ENST00000370882 FAM135AQ9P2D6 1515 aa35.41■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms