RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 AKNAQ7Z591 1439 aa21.44■■□□□ 1.02
SSR4-202ENST00000370085 CDC42BPAQ5VT25 1732 aa21.43■■□□□ 1.02
SSR4-202ENST00000370085 ITSN2Q9NZM3 1697 aa21.43■■□□□ 1.02
SSR4-202ENST00000370085 NCOA2Q15596 1464 aa21.42■■□□□ 1.02
SSR4-202ENST00000370085 CDC42BPBQ9Y5S2 1711 aa21.42■■□□□ 1.02
SSR4-202ENST00000370085 KANK4Q5T7N3 995 aaPredicted RBP21.41■■□□□ 1.02
SSR4-202ENST00000370085 CFDP1Q9UEE9 299 aaPredicted RBP21.41■■□□□ 1.02
SSR4-202ENST00000370085 GPATCH8Q9UKJ3 1502 aaKnown RBP21.4■■□□□ 1.02
SSR4-202ENST00000370085 ADGRL1O94910 1474 aa21.39■■□□□ 1.02
SSR4-202ENST00000370085 DENND4BO75064 1496 aaPredicted RBP21.37■■□□□ 1.01
SSR4-202ENST00000370085 ZNF777Q9ULD5 760 aaPredicted RBP21.35■■□□□ 1.01
SSR4-202ENST00000370085 PLEKHH2Q8IVE3 1493 aa21.34■■□□□ 1.01
SSR4-202ENST00000370085 COL17A1Q9UMD9 1497 aaPredicted RBP21.34■■□□□ 1.01
SSR4-202ENST00000370085 SCAPERQ9BY12 1400 aa21.34■■□□□ 1.01
SSR4-202ENST00000370085 RAPGEF3O95398 923 aa21.31■■□□□ 1
SSR4-202ENST00000370085 MYOM3Q5VTT5 1437 aa21.29■■□□□ 1
SSR4-202ENST00000370085 ZNF518AQ6AHZ1 1483 aa21.29■■□□□ 1
SSR4-202ENST00000370085 RICTORQ6R327 1708 aa21.29■■□□□ 1
SSR4-202ENST00000370085 ABCC1P33527 1531 aa21.29■■□□□ 1
SSR4-202ENST00000370085 POGZQ7Z3K3 1410 aa21.29■■□□□ 1
SSR4-202ENST00000370085 SAMD9LQ8IVG5 1584 aa21.27■■□□□ 1
SSR4-202ENST00000370085 MIA2Q96PC5 1412 aa21.27■■□□□ 1
SSR4-202ENST00000370085 KIAA1107Q9UPP5 1409 aa21.27■■□□□ 1
SSR4-202ENST00000370085 FRMPD1Q5SYB0 1578 aa21.24■□□□□ 0.99
SSR4-202ENST00000370085 SYCP2Q9BX26 1530 aa21.24■□□□□ 0.99
SSR4-202ENST00000370085 MYT1LQ9UL68 1186 aa21.23■□□□□ 0.99
SSR4-202ENST00000370085 MAGI2Q86UL8 1455 aa21.23■□□□□ 0.99
SSR4-202ENST00000370085 ZMYM4Q5VZL5 1548 aa21.23■□□□□ 0.99
SSR4-202ENST00000370085 CAMSAP2Q08AD1 1489 aa21.22■□□□□ 0.99
SSR4-202ENST00000370085 RSPH4AQ5TD94 716 aa21.22■□□□□ 0.99
SSR4-202ENST00000370085 HNRNPMP52272 730 aaKnown RBP eCLIP21.21■□□□□ 0.99
SSR4-202ENST00000370085 AFAP1Q8N556 730 aa21.2■□□□□ 0.98
SSR4-202ENST00000370085 ZNF644Q9H582 1327 aaPredicted RBP21.19■□□□□ 0.98
SSR4-202ENST00000370085 ARHGEF12Q9NZN5 1544 aa21.19■□□□□ 0.98
SSR4-202ENST00000370085 KDM5CP41229 1560 aa21.19■□□□□ 0.98
SSR4-202ENST00000370085 FGD6Q6ZV73 1430 aa21.18■□□□□ 0.98
SSR4-202ENST00000370085 TRAPPC8Q9Y2L5 1435 aa21.18■□□□□ 0.98
SSR4-202ENST00000370085 ZFYVE16Q7Z3T8 1539 aa21.17■□□□□ 0.98
SSR4-202ENST00000370085 HECW2Q9P2P5 1572 aa21.17■□□□□ 0.98
SSR4-202ENST00000370085 PPARGC1BQ86YN6 1023 aaKnown RBP21.16■□□□□ 0.98
SSR4-202ENST00000370085 PTPN23Q9H3S7 1636 aa21.15■□□□□ 0.98
SSR4-202ENST00000370085 ARHGEF40Q8TER5 1519 aa21.15■□□□□ 0.98
SSR4-202ENST00000370085 SPAG9O60271 1321 aaKnown RBP21.15■□□□□ 0.98
SSR4-202ENST00000370085 CCDC141Q6ZP82 1450 aa21.14■□□□□ 0.98
SSR4-202ENST00000370085 MLH3Q9UHC1 1453 aa21.14■□□□□ 0.98
SSR4-202ENST00000370085 TSPY4P0CV99 314 aa21.13■□□□□ 0.97
SSR4-202ENST00000370085 TSPY10P0CW01 314 aa21.13■□□□□ 0.97
SSR4-202ENST00000370085 ARHGEF5Q12774 1597 aa21.13■□□□□ 0.97
SSR4-202ENST00000370085 MBD5Q9P267 1494 aa21.13■□□□□ 0.97
SSR4-202ENST00000370085 TCOF1Q13428 1488 aaKnown RBP21.1■□□□□ 0.97
SSR4-202ENST00000370085 FAM50AQ14320 339 aaKnown RBP21.09■□□□□ 0.97
SSR4-202ENST00000370085 YEATS2Q9ULM3 1422 aa21.09■□□□□ 0.97
SSR4-202ENST00000370085 ATP10AO60312 1499 aa21.08■□□□□ 0.97
SSR4-202ENST00000370085 ATP7AQ04656 1500 aa21.08■□□□□ 0.96
SSR4-202ENST00000370085 RTEL1-TNFRSF6BF6WH68 1400 aa21.07■□□□□ 0.96
SSR4-202ENST00000370085 ARID4BQ4LE39 1312 aaPredicted RBP21.06■□□□□ 0.96
SSR4-202ENST00000370085 C9orf84Q5VXU9 1444 aa21.06■□□□□ 0.96
SSR4-202ENST00000370085 KIDINS220Q9ULH0 1771 aa21.06■□□□□ 0.96
SSR4-202ENST00000370085 INO80Q9ULG1 1556 aaPredicted RBP21.06■□□□□ 0.96
SSR4-202ENST00000370085 DIP2CQ9Y2E4 1556 aa21.04■□□□□ 0.96
SSR4-202ENST00000370085 ABCA6Q8N139 1617 aa21.03■□□□□ 0.96
SSR4-202ENST00000370085 DNMT1P26358 1616 aaKnown RBP21.02■□□□□ 0.96
SSR4-202ENST00000370085 REREQ9P2R6 1566 aa21.01■□□□□ 0.95
SSR4-202ENST00000370085 MAST1Q9Y2H9 1570 aa21.01■□□□□ 0.95
SSR4-202ENST00000370085 SHANK2Q9UPX8 1470 aa21.01■□□□□ 0.95
SSR4-202ENST00000370085 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21■□□□□ 0.956e-8■■□□□ 11.8
SSR4-202ENST00000370085 ADGBQ8N7X0 1667 aa21■□□□□ 0.95
SSR4-202ENST00000370085 DAPK1P53355 1430 aa21■□□□□ 0.95
SSR4-202ENST00000370085 CROCC2H7BZ55 1655 aa20.99■□□□□ 0.95
SSR4-202ENST00000370085 ABCC5O15440 1437 aa20.98■□□□□ 0.95
SSR4-202ENST00000370085 RRBP1Q9P2E9 1410 aaKnown RBP20.96■□□□□ 0.95
SSR4-202ENST00000370085 A2MP01023 1474 aa20.96■□□□□ 0.95
SSR4-202ENST00000370085 ANKRD30AQ9BXX3 1397 aa20.94■□□□□ 0.94
SSR4-202ENST00000370085 AGLP35573 1532 aa20.94■□□□□ 0.94
SSR4-202ENST00000370085 PLXNC1O60486 1568 aa20.93■□□□□ 0.94
SSR4-202ENST00000370085 DHX29Q7Z478 1369 aaKnown RBP20.92■□□□□ 0.94
SSR4-202ENST00000370085 BCORL1Q5H9F3 1711 aa20.92■□□□□ 0.94
SSR4-202ENST00000370085 CHIC2Q9UKJ5 165 aa20.9■□□□□ 0.94
SSR4-202ENST00000370085 MLECQ14165 292 aa20.89■□□□□ 0.93
SSR4-202ENST00000370085 DUOX2Q9NRD8 1548 aa20.88■□□□□ 0.93
SSR4-202ENST00000370085 KIF15Q9NS87 1388 aa20.88■□□□□ 0.93
SSR4-202ENST00000370085 ITGAEP38570 1179 aa20.88■□□□□ 0.93
SSR4-202ENST00000370085 ESF1Q9H501 851 aaKnown RBP20.88■□□□□ 0.93
SSR4-202ENST00000370085 SIGLEC1Q9BZZ2 1709 aa20.87■□□□□ 0.93
SSR4-202ENST00000370085 ADGRL2O95490 1459 aa20.87■□□□□ 0.93
SSR4-202ENST00000370085 KDM4FA0A1W2PPD8 638 aa20.86■□□□□ 0.93
SSR4-202ENST00000370085 RRP7BPQ9NSQ0 103 aa20.86■□□□□ 0.93
SSR4-202ENST00000370085 ADAMTSL3P82987 1691 aa20.85■□□□□ 0.93
SSR4-202ENST00000370085 NCOA1Q15788 1441 aa20.85■□□□□ 0.93
SSR4-202ENST00000370085 AEBP2Q6ZN18 517 aaPredicted RBP20.84■□□□□ 0.93
SSR4-202ENST00000370085 ROCK1Q13464 1354 aa20.84■□□□□ 0.93
SSR4-202ENST00000370085 KIF3BO15066 747 aa20.83■□□□□ 0.93
SSR4-202ENST00000370085 ERBINQ96RT1 1412 aa20.83■□□□□ 0.93
SSR4-202ENST00000370085 FER1L4A9Z1Z3 1794 aa20.82■□□□□ 0.92
SSR4-202ENST00000370085 EIF2AK4Q9P2K8 1649 aaKnown RBP20.82■□□□□ 0.92
SSR4-202ENST00000370085 PPP6R1Q9UPN7 881 aa20.82■□□□□ 0.92
SSR4-202ENST00000370085 GGT6Q6P531 493 aa20.81■□□□□ 0.92
SSR4-202ENST00000370085 MADDQ8WXG6 1647 aa20.81■□□□□ 0.92
SSR4-202ENST00000370085 PTPRKQ15262 1439 aa20.78■□□□□ 0.92
SSR4-202ENST00000370085 CNTLNQ9NXG0 1405 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms