RNA–Protein interactions for RNA: ENST00000369459.6

BRCC3-203, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5 BASIC

Gene BRCC3, Length 2,641 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-203ENST00000369459 ABCC2Q92887 1545 aa10.89□□□□□ -0.67
BRCC3-203ENST00000369459 PTPRGP23470 1445 aa10.89□□□□□ -0.67
BRCC3-203ENST00000369459 OSCARQ8IYS5 282 aa10.89□□□□□ -0.67
BRCC3-203ENST00000369459 SALL2Q9Y467 1007 aaPredicted RBP10.89□□□□□ -0.67
BRCC3-203ENST00000369459 RRBP1Q9P2E9 1410 aaKnown RBP10.87□□□□□ -0.67
BRCC3-203ENST00000369459 ERCC6L2Q5T890 1561 aa10.87□□□□□ -0.67
BRCC3-203ENST00000369459 UACAQ9BZF9 1416 aa10.87□□□□□ -0.67
BRCC3-203ENST00000369459 FOXD1Q16676 465 aa10.86□□□□□ -0.67
BRCC3-203ENST00000369459 PLB1Q6P1J6 1458 aa10.86□□□□□ -0.67
BRCC3-203ENST00000369459 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.85□□□□□ -0.67
BRCC3-203ENST00000369459 ITSN2Q9NZM3 1697 aa10.85□□□□□ -0.67
BRCC3-203ENST00000369459 CDK11BP21127 795 aaKnown RBP10.85□□□□□ -0.67
BRCC3-203ENST00000369459 CDK11AQ9UQ88 783 aaPredicted RBP10.85□□□□□ -0.67
BRCC3-203ENST00000369459 MAGI3Q5TCQ9 1506 aa10.84□□□□□ -0.67
BRCC3-203ENST00000369459 A0A0U1RQG5 324 aaPredicted RBP10.84□□□□□ -0.67
BRCC3-203ENST00000369459 CDK13Q14004 1512 aaKnown RBP10.84□□□□□ -0.67
BRCC3-203ENST00000369459 MTUS2Q5JR59 1369 aa10.83□□□□□ -0.68
BRCC3-203ENST00000369459 AAMPQ13685 434 aa10.83□□□□□ -0.68
BRCC3-203ENST00000369459 KANK4Q5T7N3 995 aaPredicted RBP10.83□□□□□ -0.68
BRCC3-203ENST00000369459 KDM5BQ9UGL1 1544 aa10.83□□□□□ -0.68
BRCC3-203ENST00000369459 TROQ12816 1431 aaPredicted RBP10.82□□□□□ -0.68
BRCC3-203ENST00000369459 ATP10BO94823 1461 aa10.82□□□□□ -0.68
BRCC3-203ENST00000369459 ZCCHC11Q5TAX3 1644 aaKnown RBP10.82□□□□□ -0.68
BRCC3-203ENST00000369459 KIF14Q15058 1648 aa10.82□□□□□ -0.68
BRCC3-203ENST00000369459 NCOA2Q15596 1464 aa10.81□□□□□ -0.68
BRCC3-203ENST00000369459 MIA2Q96PC5 1412 aa10.8□□□□□ -0.68
BRCC3-203ENST00000369459 PAXIP1Q6ZW49 1069 aaPredicted RBP10.79□□□□□ -0.68
BRCC3-203ENST00000369459 PPARGC1BQ86YN6 1023 aaKnown RBP10.79□□□□□ -0.68
BRCC3-203ENST00000369459 MYOM3Q5VTT5 1437 aa10.79□□□□□ -0.68
BRCC3-203ENST00000369459 TCOF1Q13428 1488 aaKnown RBP10.79□□□□□ -0.68
BRCC3-203ENST00000369459 IGSF3O75054 1194 aa10.78□□□□□ -0.68
BRCC3-203ENST00000369459 CCNB3Q8WWL7 1395 aa10.77□□□□□ -0.68
BRCC3-203ENST00000369459 ZEB1P37275 1124 aaPredicted RBP10.77□□□□□ -0.68
BRCC3-203ENST00000369459 CDC42BPAQ5VT25 1732 aa10.77□□□□□ -0.69
BRCC3-203ENST00000369459 RSPH4AQ5TD94 716 aa10.77□□□□□ -0.69
BRCC3-203ENST00000369459 PTPN23Q9H3S7 1636 aa10.77□□□□□ -0.69
BRCC3-203ENST00000369459 FGD6Q6ZV73 1430 aa10.76□□□□□ -0.69
BRCC3-203ENST00000369459 PCGF6Q9BYE7 350 aa10.76□□□□□ -0.69
BRCC3-203ENST00000369459 ATP1B4Q9UN42 357 aaPredicted RBP10.76□□□□□ -0.69
BRCC3-203ENST00000369459 PHLDB1Q86UU1 1377 aa10.76□□□□□ -0.69
BRCC3-203ENST00000369459 RIMBP3CA6NJZ7 1639 aa10.75□□□□□ -0.69
BRCC3-203ENST00000369459 RIMBP3BA6NNM3 1639 aa10.75□□□□□ -0.69
BRCC3-203ENST00000369459 RIMBP3Q9UFD9 1639 aa10.75□□□□□ -0.69
BRCC3-203ENST00000369459 ABCC10Q5T3U5 1492 aa10.75□□□□□ -0.69
BRCC3-203ENST00000369459 MYO5CQ9NQX4 1742 aa10.75□□□□□ -0.69
BRCC3-203ENST00000369459 PREX2Q70Z35 1606 aa10.75□□□□□ -0.69
BRCC3-203ENST00000369459 ACIN1Q9UKV3 1341 aaKnown RBP10.75□□□□□ -0.69
BRCC3-203ENST00000369459 ARAP3Q8WWN8 1544 aa10.74□□□□□ -0.69
BRCC3-203ENST00000369459 RSPH6AQ9H0K4 717 aa10.74□□□□□ -0.69
BRCC3-203ENST00000369459 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.73□□□□□ -0.69
BRCC3-203ENST00000369459 PLEKHD1A6NEE1 506 aa10.72□□□□□ -0.69
BRCC3-203ENST00000369459 IRX6P78412 446 aaPredicted RBP10.71□□□□□ -0.69
BRCC3-203ENST00000369459 CDC42BPBQ9Y5S2 1711 aa10.71□□□□□ -0.69
BRCC3-203ENST00000369459 CROCC2H7BZ55 1655 aa10.71□□□□□ -0.69
BRCC3-203ENST00000369459 DNMT1P26358 1616 aaKnown RBP10.71□□□□□ -0.7
BRCC3-203ENST00000369459 ABCA9Q8IUA7 1624 aa10.71□□□□□ -0.7
BRCC3-203ENST00000369459 HSP90B1P14625 803 aaKnown RBP10.7□□□□□ -0.7
BRCC3-203ENST00000369459 MAPKBP1O60336 1514 aa10.7□□□□□ -0.7
BRCC3-203ENST00000369459 GPATCH8Q9UKJ3 1502 aaKnown RBP10.7□□□□□ -0.7
BRCC3-203ENST00000369459 ADGBQ8N7X0 1667 aa10.69□□□□□ -0.7
BRCC3-203ENST00000369459 WDR7Q9Y4E6 1490 aa10.69□□□□□ -0.7
BRCC3-203ENST00000369459 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.69□□□□□ -0.7
BRCC3-203ENST00000369459 AKNAQ7Z591 1439 aa10.69□□□□□ -0.7
BRCC3-203ENST00000369459 RBM10P98175 930 aaKnown RBP10.69□□□□□ -0.7
BRCC3-203ENST00000369459 ARHGEF5Q12774 1597 aa10.68□□□□□ -0.7
BRCC3-203ENST00000369459 GCC2Q8IWJ2 1684 aa10.68□□□□□ -0.7
BRCC3-203ENST00000369459 ERICH6BQ5W0A0 696 aa10.68□□□□□ -0.7
BRCC3-203ENST00000369459 TTC37Q6PGP7 1564 aa10.68□□□□□ -0.7
BRCC3-203ENST00000369459 CFAP44Q96MT7 982 aa10.67□□□□□ -0.7
BRCC3-203ENST00000369459 CFAP74Q9C0B2 1584 aa10.67□□□□□ -0.7
BRCC3-203ENST00000369459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.66□□□□□ -0.7
BRCC3-203ENST00000369459 HNRNPUL2Q1KMD3 747 aaKnown RBP10.66□□□□□ -0.7
BRCC3-203ENST00000369459 PLEKHH2Q8IVE3 1493 aa10.66□□□□□ -0.7
BRCC3-203ENST00000369459 GLI2P10070 1586 aa10.65□□□□□ -0.7
BRCC3-203ENST00000369459 CAMSAP2Q08AD1 1489 aa10.65□□□□□ -0.7
BRCC3-203ENST00000369459 SHANK2Q9UPX8 1470 aa10.65□□□□□ -0.7
BRCC3-203ENST00000369459 CLSPNQ9HAW4 1339 aa10.64□□□□□ -0.71
BRCC3-203ENST00000369459 MAST1Q9Y2H9 1570 aa10.64□□□□□ -0.71
BRCC3-203ENST00000369459 NAP1L5Q96NT1 182 aaPredicted RBP10.63□□□□□ -0.71
BRCC3-203ENST00000369459 SAMD9LQ8IVG5 1584 aa10.63□□□□□ -0.71
BRCC3-203ENST00000369459 PLCH2O75038 1416 aa10.63□□□□□ -0.71
BRCC3-203ENST00000369459 ASXL2Q76L83 1435 aa10.63□□□□□ -0.71
BRCC3-203ENST00000369459 ROCK1Q13464 1354 aa10.62□□□□□ -0.71
BRCC3-203ENST00000369459 ZBTB22O15209 634 aa10.62□□□□□ -0.71
BRCC3-203ENST00000369459 ADGRL2O95490 1459 aa10.62□□□□□ -0.71
BRCC3-203ENST00000369459 NPM1P06748 294 aaKnown RBP eCLIP10.62□□□□□ -0.71
BRCC3-203ENST00000369459 KIAA1107Q9UPP5 1409 aa10.62□□□□□ -0.71
BRCC3-203ENST00000369459 BCCIPQ9P287 314 aaKnown RBP eCLIP10.61□□□□□ -0.71
BRCC3-203ENST00000369459 DAPK1P53355 1430 aa10.61□□□□□ -0.71
BRCC3-203ENST00000369459 ZNF326Q5BKZ1 582 aaKnown RBP10.61□□□□□ -0.71
BRCC3-203ENST00000369459 HFM1A2PYH4 1435 aa10.6□□□□□ -0.71
BRCC3-203ENST00000369459 SLC4A1APQ9BWU0 796 aaKnown RBP10.6□□□□□ -0.71
BRCC3-203ENST00000369459 MAP3K4Q9Y6R4 1608 aa10.6□□□□□ -0.71
BRCC3-203ENST00000369459 DEKP35659 375 aaKnown RBP10.6□□□□□ -0.71
BRCC3-203ENST00000369459 ARHGAP5Q13017 1502 aa10.59□□□□□ -0.71
BRCC3-203ENST00000369459 POLR3GLQ9BT43 218 aa10.59□□□□□ -0.71
BRCC3-203ENST00000369459 SETD5Q9C0A6 1442 aa10.59□□□□□ -0.71
BRCC3-203ENST00000369459 ABCC1P33527 1531 aa10.59□□□□□ -0.71
BRCC3-203ENST00000369459 ARID3CA6NKF2 412 aa10.59□□□□□ -0.71
BRCC3-203ENST00000369459 CFDP1Q9UEE9 299 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms