RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 RAPGEF3O95398 923 aa29.3■■■□□ 2.28
CHTOP-202ENST00000368687 TIAM1Q13009 1591 aa29.3■■■□□ 2.28
CHTOP-202ENST00000368687 MAP3K1Q13233 1512 aa29.3■■■□□ 2.28
CHTOP-202ENST00000368687 CDC42BPBQ9Y5S2 1711 aa29.28■■■□□ 2.28
CHTOP-202ENST00000368687 CDC42BPAQ5VT25 1732 aa29.27■■■□□ 2.28
CHTOP-202ENST00000368687 RICTORQ6R327 1708 aa29.27■■■□□ 2.28
CHTOP-202ENST00000368687 FRMPD1Q5SYB0 1578 aa29.26■■■□□ 2.28
CHTOP-202ENST00000368687 ZMYM4Q5VZL5 1548 aa29.21■■■□□ 2.27
CHTOP-202ENST00000368687 SUPT6HQ7KZ85 1726 aaKnown RBP29.21■■■□□ 2.27
CHTOP-202ENST00000368687 POGZQ7Z3K3 1410 aa29.2■■■□□ 2.27
CHTOP-202ENST00000368687 SCAPERQ9BY12 1400 aa29.2■■■□□ 2.27
CHTOP-202ENST00000368687 CCNB3Q8WWL7 1395 aa29.2■■■□□ 2.26
CHTOP-202ENST00000368687 ITSN2Q9NZM3 1697 aa29.19■■■□□ 2.26
CHTOP-202ENST00000368687 GPATCH8Q9UKJ3 1502 aaKnown RBP29.18■■■□□ 2.26
CHTOP-202ENST00000368687 MAGI2Q86UL8 1455 aa29.17■■■□□ 2.26
CHTOP-202ENST00000368687 ZNF518AQ6AHZ1 1483 aa29.17■■■□□ 2.26
CHTOP-202ENST00000368687 LRRC9Q6ZRR7 1453 aa29.16■■■□□ 2.26
CHTOP-202ENST00000368687 APLP2Q06481 763 aa29.15■■■□□ 2.26
CHTOP-202ENST00000368687 ABCC1P33527 1531 aa29.15■■■□□ 2.26
CHTOP-202ENST00000368687 ARHGEF40Q8TER5 1519 aa29.14■■■□□ 2.25
CHTOP-202ENST00000368687 PLEKHH2Q8IVE3 1493 aa29.12■■■□□ 2.25
CHTOP-202ENST00000368687 NCOA2Q15596 1464 aa29.1■■■□□ 2.25
CHTOP-202ENST00000368687 CFDP1Q9UEE9 299 aaPredicted RBP29.1■■■□□ 2.25
CHTOP-202ENST00000368687 ZFYVE16Q7Z3T8 1539 aa29.09■■■□□ 2.25
CHTOP-202ENST00000368687 KDM5CP41229 1560 aa29.09■■■□□ 2.25
CHTOP-202ENST00000368687 SAMD9LQ8IVG5 1584 aa29.07■■■□□ 2.24
CHTOP-202ENST00000368687 KIAA1107Q9UPP5 1409 aa29.06■■■□□ 2.24
CHTOP-202ENST00000368687 HECW2Q9P2P5 1572 aa29.02■■■□□ 2.24
CHTOP-202ENST00000368687 ZNF777Q9ULD5 760 aaPredicted RBP29.01■■■□□ 2.23
CHTOP-202ENST00000368687 SYCP2Q9BX26 1530 aa29■■■□□ 2.23
CHTOP-202ENST00000368687 YEATS2Q9ULM3 1422 aa29■■■□□ 2.23
CHTOP-202ENST00000368687 ARHGEF12Q9NZN5 1544 aa28.99■■■□□ 2.23
CHTOP-202ENST00000368687 MLH3Q9UHC1 1453 aa28.98■■■□□ 2.23
CHTOP-202ENST00000368687 AFAP1Q8N556 730 aa28.96■■■□□ 2.23
CHTOP-202ENST00000368687 TRAPPC8Q9Y2L5 1435 aa28.95■■■□□ 2.23
CHTOP-202ENST00000368687 KANK4Q5T7N3 995 aaPredicted RBP28.95■■■□□ 2.22
CHTOP-202ENST00000368687 ADAMTSL3P82987 1691 aa28.94■■■□□ 2.22
CHTOP-202ENST00000368687 ARID4BQ4LE39 1312 aaPredicted RBP28.94■■■□□ 2.22
CHTOP-202ENST00000368687 ATP10AO60312 1499 aa28.93■■■□□ 2.22
CHTOP-202ENST00000368687 C9orf84Q5VXU9 1444 aa28.93■■■□□ 2.22
CHTOP-202ENST00000368687 BCORL1Q5H9F3 1711 aa28.9■■■□□ 2.22
CHTOP-202ENST00000368687 MIA2Q96PC5 1412 aa28.9■■■□□ 2.22
CHTOP-202ENST00000368687 MYT1LQ9UL68 1186 aa28.9■■■□□ 2.22
CHTOP-202ENST00000368687 SIGLEC1Q9BZZ2 1709 aa28.89■■■□□ 2.22
CHTOP-202ENST00000368687 REREQ9P2R6 1566 aa28.89■■■□□ 2.22
CHTOP-202ENST00000368687 MYOM3Q5VTT5 1437 aa28.89■■■□□ 2.22
CHTOP-202ENST00000368687 CAMSAP2Q08AD1 1489 aa28.89■■■□□ 2.22
CHTOP-202ENST00000368687 HNRNPMP52272 730 aaKnown RBP eCLIP28.87■■■□□ 2.219e-8■■■■■ 28.7
CHTOP-202ENST00000368687 RSPH4AQ5TD94 716 aa28.87■■■□□ 2.21
CHTOP-202ENST00000368687 DIP2CQ9Y2E4 1556 aa28.87■■■□□ 2.21
CHTOP-202ENST00000368687 KIDINS220Q9ULH0 1771 aa28.86■■■□□ 2.21
CHTOP-202ENST00000368687 ABCA6Q8N139 1617 aa28.85■■■□□ 2.21
CHTOP-202ENST00000368687 SPAG9O60271 1321 aaKnown RBP28.85■■■□□ 2.21
CHTOP-202ENST00000368687 PTPRMP28827 1452 aa28.85■■■□□ 2.21
CHTOP-202ENST00000368687 MBD5Q9P267 1494 aa28.85■■■□□ 2.21
CHTOP-202ENST00000368687 INO80Q9ULG1 1556 aaPredicted RBP28.84■■■□□ 2.21
CHTOP-202ENST00000368687 MADDQ8WXG6 1647 aa28.83■■■□□ 2.21
CHTOP-202ENST00000368687 ATP7AQ04656 1500 aa28.83■■■□□ 2.21
CHTOP-202ENST00000368687 ZNF644Q9H582 1327 aaPredicted RBP28.82■■■□□ 2.2
CHTOP-202ENST00000368687 CCDC141Q6ZP82 1450 aa28.82■■■□□ 2.2
CHTOP-202ENST00000368687 ARHGEF5Q12774 1597 aa28.82■■■□□ 2.2
CHTOP-202ENST00000368687 RTEL1-TNFRSF6BF6WH68 1400 aa28.78■■■□□ 2.2
CHTOP-202ENST00000368687 AGLP35573 1532 aa28.77■■■□□ 2.2
CHTOP-202ENST00000368687 ADGBQ8N7X0 1667 aa28.74■■■□□ 2.19
CHTOP-202ENST00000368687 MLECQ14165 292 aa28.73■■■□□ 2.19
CHTOP-202ENST00000368687 RIMS1Q86UR5 1692 aaKnown RBP28.71■■■□□ 2.19
CHTOP-202ENST00000368687 FGD6Q6ZV73 1430 aa28.71■■■□□ 2.19
CHTOP-202ENST00000368687 PTPN23Q9H3S7 1636 aa28.71■■■□□ 2.19
CHTOP-202ENST00000368687 TSPY4P0CV99 314 aa28.69■■■□□ 2.18
CHTOP-202ENST00000368687 TSPY10P0CW01 314 aa28.69■■■□□ 2.18
CHTOP-202ENST00000368687 FER1L4A9Z1Z3 1794 aa28.68■■■□□ 2.18
CHTOP-202ENST00000368687 PLXNC1O60486 1568 aa28.67■■■□□ 2.18
CHTOP-202ENST00000368687 A2MP01023 1474 aa28.67■■■□□ 2.18
CHTOP-202ENST00000368687 MAST1Q9Y2H9 1570 aa28.67■■■□□ 2.18
CHTOP-202ENST00000368687 TCOF1Q13428 1488 aaKnown RBP28.66■■■□□ 2.18
CHTOP-202ENST00000368687 SHANK2Q9UPX8 1470 aa28.61■■■□□ 2.17
CHTOP-202ENST00000368687 CROCC2H7BZ55 1655 aa28.6■■■□□ 2.17
CHTOP-202ENST00000368687 DNMT1P26358 1616 aaKnown RBP28.58■■■□□ 2.17
CHTOP-202ENST00000368687 PLPPR3Q6T4P5 718 aa28.58■■■□□ 2.17
CHTOP-202ENST00000368687 DHX29Q7Z478 1369 aaKnown RBP28.57■■■□□ 2.16
CHTOP-202ENST00000368687 CNTLNQ9NXG0 1405 aa28.55■■■□□ 2.16
CHTOP-202ENST00000368687 ESF1Q9H501 851 aaKnown RBP28.54■■■□□ 2.16
CHTOP-202ENST00000368687 LMTK3Q96Q04 1460 aa28.53■■■□□ 2.16
CHTOP-202ENST00000368687 DAPK1P53355 1430 aa28.52■■■□□ 2.16
CHTOP-202ENST00000368687 ABCC5O15440 1437 aa28.52■■■□□ 2.16
CHTOP-202ENST00000368687 PPP6R1Q9UPN7 881 aa28.51■■■□□ 2.15
CHTOP-202ENST00000368687 FAM135AQ9P2D6 1515 aa28.48■■■□□ 2.15
CHTOP-202ENST00000368687 MROH2AA6NES4 1674 aa28.48■■■□□ 2.15
CHTOP-202ENST00000368687 CEBPAP49715 358 aaPredicted RBP28.47■■■□□ 2.15
CHTOP-202ENST00000368687 EIF2AK4Q9P2K8 1649 aaKnown RBP28.47■■■□□ 2.15
CHTOP-202ENST00000368687 DUOX2Q9NRD8 1548 aa28.46■■■□□ 2.15
CHTOP-202ENST00000368687 FAM50AQ14320 339 aaKnown RBP28.44■■■□□ 2.14
CHTOP-202ENST00000368687 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.43■■■□□ 2.14
CHTOP-202ENST00000368687 ANKRD30AQ9BXX3 1397 aa28.42■■■□□ 2.14
CHTOP-202ENST00000368687 KIF15Q9NS87 1388 aa28.4■■■□□ 2.14
CHTOP-202ENST00000368687 C3P01024 1663 aa28.39■■■□□ 2.14
CHTOP-202ENST00000368687 KIF3BO15066 747 aa28.39■■■□□ 2.14
CHTOP-202ENST00000368687 HSPA2P54652 639 aa28.39■■■□□ 2.14
CHTOP-202ENST00000368687 GGT6Q6P531 493 aa28.39■■■□□ 2.14
CHTOP-202ENST00000368687 ERBINQ96RT1 1412 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms