RNA–Protein interactions for RNA: ENST00000368300.8

LMNA-206, Transcript of lamin A/C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNA, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-206ENST00000368300 TIMELESSQ9UNS1 1208 aa17.63■□□□□ 0.41
LMNA-206ENST00000368300 ABCC5O15440 1437 aa17.62■□□□□ 0.41
LMNA-206ENST00000368300 DDX10Q13206 875 aaKnown RBP17.62■□□□□ 0.41
LMNA-206ENST00000368300 MPHOSPH9Q99550 1183 aa17.62■□□□□ 0.41
LMNA-206ENST00000368300 DAPK1P53355 1430 aa17.62■□□□□ 0.41
LMNA-206ENST00000368300 PTPRGP23470 1445 aa17.58■□□□□ 0.4
LMNA-206ENST00000368300 KIF14Q15058 1648 aa17.57■□□□□ 0.4
LMNA-206ENST00000368300 ATP10BO94823 1461 aa17.57■□□□□ 0.4
LMNA-206ENST00000368300 GPATCH8Q9UKJ3 1502 aaKnown RBP17.57■□□□□ 0.4
LMNA-206ENST00000368300 DENND4BO75064 1496 aaPredicted RBP17.57■□□□□ 0.4
LMNA-206ENST00000368300 KCNH8Q96L42 1107 aa17.54■□□□□ 0.4
LMNA-206ENST00000368300 CAMSAP2Q08AD1 1489 aa17.53■□□□□ 0.4
LMNA-206ENST00000368300 BCL11AQ9H165 835 aa17.53■□□□□ 0.4
LMNA-206ENST00000368300 AKNAQ7Z591 1439 aa17.53■□□□□ 0.4
LMNA-206ENST00000368300 SLC4A1APQ9BWU0 796 aaKnown RBP17.52■□□□□ 0.4
LMNA-206ENST00000368300 ABCA8O94911 1581 aa17.52■□□□□ 0.4
LMNA-206ENST00000368300 ROCK1Q13464 1354 aa17.51■□□□□ 0.39
LMNA-206ENST00000368300 GCC2Q8IWJ2 1684 aa17.51■□□□□ 0.39
LMNA-206ENST00000368300 DNMT1P26358 1616 aaKnown RBP17.5■□□□□ 0.39
LMNA-206ENST00000368300 HNRNPMP52272 730 aaKnown RBP eCLIP17.49■□□□□ 0.39
LMNA-206ENST00000368300 L3MBTL2Q969R5 705 aa17.48■□□□□ 0.39
LMNA-206ENST00000368300 CHD1O14646 1710 aa17.48■□□□□ 0.39
LMNA-206ENST00000368300 NCOA1Q15788 1441 aa17.47■□□□□ 0.39
LMNA-206ENST00000368300 ERCC6L2Q5T890 1561 aa17.45■□□□□ 0.38
LMNA-206ENST00000368300 KDM5BQ9UGL1 1544 aa17.44■□□□□ 0.38
LMNA-206ENST00000368300 ABCC10Q5T3U5 1492 aa17.43■□□□□ 0.38
LMNA-206ENST00000368300 ANKRD30BQ9BXX2 1392 aa17.42■□□□□ 0.38
LMNA-206ENST00000368300 TSPY4P0CV99 314 aa17.41■□□□□ 0.38
LMNA-206ENST00000368300 TSPY10P0CW01 314 aa17.41■□□□□ 0.38
LMNA-206ENST00000368300 ANKRD30AQ9BXX3 1397 aa17.4■□□□□ 0.38
LMNA-206ENST00000368300 ADCY10Q96PN6 1610 aa17.4■□□□□ 0.38
LMNA-206ENST00000368300 HSPA5P11021 654 aaKnown RBP17.4■□□□□ 0.38
LMNA-206ENST00000368300 ITSN2Q9NZM3 1697 aa17.4■□□□□ 0.38
LMNA-206ENST00000368300 PKD2Q13563 968 aa17.39■□□□□ 0.37
LMNA-206ENST00000368300 NBPF8Q3BBV2 869 aa17.38■□□□□ 0.37
LMNA-206ENST00000368300 ANKRD50Q9ULJ7 1429 aa17.37■□□□□ 0.37
LMNA-206ENST00000368300 CDC42BPAQ5VT25 1732 aa17.37■□□□□ 0.37
LMNA-206ENST00000368300 PZPP20742 1482 aa17.36■□□□□ 0.37
LMNA-206ENST00000368300 C9orf84Q5VXU9 1444 aa17.36■□□□□ 0.37
LMNA-206ENST00000368300 ZNF326Q5BKZ1 582 aaKnown RBP17.34■□□□□ 0.37
LMNA-206ENST00000368300 NUP155O75694 1391 aa17.34■□□□□ 0.37
LMNA-206ENST00000368300 EIF4G2P78344 907 aaKnown RBP eCLIP17.33■□□□□ 0.36
LMNA-206ENST00000368300 ADGRL2O95490 1459 aa17.33■□□□□ 0.36
LMNA-206ENST00000368300 ANP32CO43423 234 aa17.32■□□□□ 0.36
LMNA-206ENST00000368300 PRKCSHP14314 528 aaPredicted RBP17.32■□□□□ 0.36
LMNA-206ENST00000368300 RPRD2Q5VT52 1461 aaKnown RBP17.32■□□□□ 0.36
LMNA-206ENST00000368300 KIF15Q9NS87 1388 aa17.31■□□□□ 0.36
LMNA-206ENST00000368300 SHROOM2Q13796 1616 aa17.3■□□□□ 0.36
LMNA-206ENST00000368300 WASHC2AQ641Q2 1341 aa17.3■□□□□ 0.36
LMNA-206ENST00000368300 MBD5Q9P267 1494 aa17.3■□□□□ 0.36
LMNA-206ENST00000368300 C11orf95C9JLR9 678 aaPredicted RBP17.29■□□□□ 0.36
LMNA-206ENST00000368300 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.28■□□□□ 0.362e-8■■■□□ 16.1
LMNA-206ENST00000368300 KIAA1107Q9UPP5 1409 aa17.28■□□□□ 0.36
LMNA-206ENST00000368300 CROCC2H7BZ55 1655 aa17.27■□□□□ 0.35
LMNA-206ENST00000368300 ADGBQ8N7X0 1667 aa17.27■□□□□ 0.35
LMNA-206ENST00000368300 ABCC2Q92887 1545 aa17.26■□□□□ 0.35
LMNA-206ENST00000368300 TEX14Q8IWB6 1497 aa17.26■□□□□ 0.35
LMNA-206ENST00000368300 ARHGAP5Q13017 1502 aa17.26■□□□□ 0.35
LMNA-206ENST00000368300 SAMD9LQ8IVG5 1584 aa17.26■□□□□ 0.35
LMNA-206ENST00000368300 TTC37Q6PGP7 1564 aa17.25■□□□□ 0.35
LMNA-206ENST00000368300 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.25■□□□□ 0.357e-7■■□□□ 11.7
LMNA-206ENST00000368300 CDC42BPBQ9Y5S2 1711 aa17.24■□□□□ 0.35
LMNA-206ENST00000368300 SHANK2Q9UPX8 1470 aa17.23■□□□□ 0.35
LMNA-206ENST00000368300 KDM2AQ9Y2K7 1162 aa17.23■□□□□ 0.35
LMNA-206ENST00000368300 CCDC141Q6ZP82 1450 aa17.23■□□□□ 0.35
LMNA-206ENST00000368300 SYCP2Q9BX26 1530 aa17.22■□□□□ 0.35
LMNA-206ENST00000368300 CLASP1Q7Z460 1538 aa17.22■□□□□ 0.35
LMNA-206ENST00000368300 RSPH4AQ5TD94 716 aa17.2■□□□□ 0.34
LMNA-206ENST00000368300 PREX2Q70Z35 1606 aa17.2■□□□□ 0.34
LMNA-206ENST00000368300 POLR3GLQ9BT43 218 aa17.19■□□□□ 0.34
LMNA-206ENST00000368300 ARHGEF5Q12774 1597 aa17.18■□□□□ 0.34
LMNA-206ENST00000368300 CCER2I3L3R5 266 aa17.18■□□□□ 0.34
LMNA-206ENST00000368300 CNGB1Q14028 1251 aaPredicted RBP17.18■□□□□ 0.34
LMNA-206ENST00000368300 EFCAB2Q5VUJ9 269 aa17.18■□□□□ 0.34
LMNA-206ENST00000368300 ARHGEF12Q9NZN5 1544 aa17.16■□□□□ 0.34
LMNA-206ENST00000368300 DCAF11Q8TEB1 546 aa17.16■□□□□ 0.34
LMNA-206ENST00000368300 RGL3Q3MIN7 710 aa17.15■□□□□ 0.34
LMNA-206ENST00000368300 AFAP1Q8N556 730 aa17.15■□□□□ 0.34
LMNA-206ENST00000368300 CCDC7Q96M83 1385 aa17.15■□□□□ 0.34
LMNA-206ENST00000368300 ZCCHC11Q5TAX3 1644 aaKnown RBP17.14■□□□□ 0.33
LMNA-206ENST00000368300 PLCH2O75038 1416 aa17.14■□□□□ 0.33
LMNA-206ENST00000368300 PLEKHH2Q8IVE3 1493 aa17.13■□□□□ 0.33
LMNA-206ENST00000368300 KIF7Q2M1P5 1343 aa17.13■□□□□ 0.33
LMNA-206ENST00000368300 SPATA31E1Q6ZUB1 1445 aa17.11■□□□□ 0.33
LMNA-206ENST00000368300 TRAPPC8Q9Y2L5 1435 aa17.11■□□□□ 0.33
LMNA-206ENST00000368300 CCDC184Q52MB2 194 aa17.11■□□□□ 0.33
LMNA-206ENST00000368300 UHRF1BP1LA0JNW5 1464 aa17.1■□□□□ 0.33
LMNA-206ENST00000368300 FAM135AQ9P2D6 1515 aa17.09■□□□□ 0.33
LMNA-206ENST00000368300 USP47Q96K76 1375 aa17.09■□□□□ 0.33
LMNA-206ENST00000368300 CARD11Q9BXL7 1154 aa17.09■□□□□ 0.33
LMNA-206ENST00000368300 MYT1LQ9UL68 1186 aa17.09■□□□□ 0.33
LMNA-206ENST00000368300 MYO5CQ9NQX4 1742 aa17.08■□□□□ 0.33
LMNA-206ENST00000368300 SUPT16HQ9Y5B9 1047 aaKnown RBP17.07■□□□□ 0.32
LMNA-206ENST00000368300 CNTLNQ9NXG0 1405 aa17.07■□□□□ 0.32
LMNA-206ENST00000368300 KDM5DQ9BY66 1539 aa17.07■□□□□ 0.32
LMNA-206ENST00000368300 SPAG9O60271 1321 aaKnown RBP17.06■□□□□ 0.32
LMNA-206ENST00000368300 OSCARQ8IYS5 282 aa17.06■□□□□ 0.32
LMNA-206ENST00000368300 PRKRIP1Q9H875 184 aaPredicted RBP17.04■□□□□ 0.32
LMNA-206ENST00000368300 CCDC144AA2RUR9 1427 aa17.03■□□□□ 0.32
LMNA-206ENST00000368300 ST20-MTHFSA0A0A6YYL1 179 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms