RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 CDC42BPBQ9Y5S2 1711 aa31.46■■■□□ 2.63
H3F3A-204ENST00000366816 TIAM1Q13009 1591 aa31.44■■■□□ 2.62
H3F3A-204ENST00000366816 PREX2Q70Z35 1606 aa31.44■■■□□ 2.62
H3F3A-204ENST00000366816 EHBP1L1Q8N3D4 1523 aa31.44■■■□□ 2.62
H3F3A-204ENST00000366816 CDC42BPAQ5VT25 1732 aa31.43■■■□□ 2.62
H3F3A-204ENST00000366816 GPATCH8Q9UKJ3 1502 aaKnown RBP31.43■■■□□ 2.62
H3F3A-204ENST00000366816 RICTORQ6R327 1708 aa31.42■■■□□ 2.62
H3F3A-204ENST00000366816 ZNF777Q9ULD5 760 aaPredicted RBP31.41■■■□□ 2.62
H3F3A-204ENST00000366816 CCNB3Q8WWL7 1395 aa31.41■■■□□ 2.62
H3F3A-204ENST00000366816 KDM4FA0A1W2PPD8 638 aa31.4■■■□□ 2.62
H3F3A-204ENST00000366816 KANK4Q5T7N3 995 aaPredicted RBP31.39■■■□□ 2.62
H3F3A-204ENST00000366816 POGZQ7Z3K3 1410 aa31.37■■■□□ 2.61
H3F3A-204ENST00000366816 AFAP1Q8N556 730 aa31.35■■■□□ 2.61
H3F3A-204ENST00000366816 CFDP1Q9UEE9 299 aaPredicted RBP31.35■■■□□ 2.61
H3F3A-204ENST00000366816 LRRC9Q6ZRR7 1453 aa31.34■■■□□ 2.61
H3F3A-204ENST00000366816 ARHGEF12Q9NZN5 1544 aa31.31■■■□□ 2.6
H3F3A-204ENST00000366816 NCOA2Q15596 1464 aa31.31■■■□□ 2.6
H3F3A-204ENST00000366816 MAP3K1Q13233 1512 aa31.3■■■□□ 2.6
H3F3A-204ENST00000366816 APLP2Q06481 763 aa31.3■■■□□ 2.6
H3F3A-204ENST00000366816 YEATS2Q9ULM3 1422 aa31.29■■■□□ 2.6
H3F3A-204ENST00000366816 ZMYM4Q5VZL5 1548 aa31.29■■■□□ 2.6
H3F3A-204ENST00000366816 ABCC1P33527 1531 aa31.28■■■□□ 2.6
H3F3A-204ENST00000366816 SUPT6HQ7KZ85 1726 aaKnown RBP31.27■■■□□ 2.6
H3F3A-204ENST00000366816 SAMD9LQ8IVG5 1584 aa31.27■■■□□ 2.6
H3F3A-204ENST00000366816 TRAPPC8Q9Y2L5 1435 aa31.27■■■□□ 2.6
H3F3A-204ENST00000366816 HNRNPMP52272 730 aaKnown RBP eCLIP31.26■■■□□ 2.592e-40■□□□□ 10.6
H3F3A-204ENST00000366816 ZNF518AQ6AHZ1 1483 aa31.26■■■□□ 2.59
H3F3A-204ENST00000366816 ZNF644Q9H582 1327 aaPredicted RBP31.25■■■□□ 2.59
H3F3A-204ENST00000366816 ZFYVE16Q7Z3T8 1539 aa31.24■■■□□ 2.59
H3F3A-204ENST00000366816 MYT1LQ9UL68 1186 aa31.23■■■□□ 2.59
H3F3A-204ENST00000366816 ARHGEF40Q8TER5 1519 aa31.23■■■□□ 2.59
H3F3A-204ENST00000366816 ITSN2Q9NZM3 1697 aa31.22■■■□□ 2.59
H3F3A-204ENST00000366816 MAGI2Q86UL8 1455 aa31.21■■■□□ 2.59
H3F3A-204ENST00000366816 ARID4BQ4LE39 1312 aaPredicted RBP31.21■■■□□ 2.59
H3F3A-204ENST00000366816 SYCP2Q9BX26 1530 aa31.19■■■□□ 2.58
H3F3A-204ENST00000366816 KDM5CP41229 1560 aa31.18■■■□□ 2.58
H3F3A-204ENST00000366816 KIAA1107Q9UPP5 1409 aa31.15■■■□□ 2.58
H3F3A-204ENST00000366816 PLEKHH2Q8IVE3 1493 aa31.13■■■□□ 2.57
H3F3A-204ENST00000366816 ATP10AO60312 1499 aa31.11■■■□□ 2.57
H3F3A-204ENST00000366816 HECW2Q9P2P5 1572 aa31.11■■■□□ 2.57
H3F3A-204ENST00000366816 MLH3Q9UHC1 1453 aa31.1■■■□□ 2.57
H3F3A-204ENST00000366816 SIGLEC1Q9BZZ2 1709 aa31.1■■■□□ 2.57
H3F3A-204ENST00000366816 SPAG9O60271 1321 aaKnown RBP31.07■■■□□ 2.56
H3F3A-204ENST00000366816 CAMSAP2Q08AD1 1489 aa31.06■■■□□ 2.56
H3F3A-204ENST00000366816 MBD5Q9P267 1494 aa31.06■■■□□ 2.56
H3F3A-204ENST00000366816 C9orf84Q5VXU9 1444 aa31.05■■■□□ 2.56
H3F3A-204ENST00000366816 MLECQ14165 292 aa31.04■■■□□ 2.56
H3F3A-204ENST00000366816 MYOM3Q5VTT5 1437 aa31.04■■■□□ 2.56
H3F3A-204ENST00000366816 DIP2CQ9Y2E4 1556 aa31.04■■■□□ 2.56
H3F3A-204ENST00000366816 KIDINS220Q9ULH0 1771 aa31.02■■■□□ 2.56
H3F3A-204ENST00000366816 ABCA6Q8N139 1617 aa31.02■■■□□ 2.56
H3F3A-204ENST00000366816 BCORL1Q5H9F3 1711 aa31.01■■■□□ 2.55
H3F3A-204ENST00000366816 ADAMTSL3P82987 1691 aa30.99■■■□□ 2.55
H3F3A-204ENST00000366816 MIA2Q96PC5 1412 aa30.96■■■□□ 2.55
H3F3A-204ENST00000366816 ATP7AQ04656 1500 aa30.95■■■□□ 2.55
H3F3A-204ENST00000366816 PPARGC1BQ86YN6 1023 aaKnown RBP30.95■■■□□ 2.55
H3F3A-204ENST00000366816 INO80Q9ULG1 1556 aaPredicted RBP30.92■■■□□ 2.54
H3F3A-204ENST00000366816 MADDQ8WXG6 1647 aa30.92■■■□□ 2.54
H3F3A-204ENST00000366816 CCDC141Q6ZP82 1450 aa30.92■■■□□ 2.54
H3F3A-204ENST00000366816 RSPH4AQ5TD94 716 aa30.91■■■□□ 2.54
H3F3A-204ENST00000366816 REREQ9P2R6 1566 aa30.89■■■□□ 2.54
H3F3A-204ENST00000366816 PTPRMP28827 1452 aa30.87■■■□□ 2.53
H3F3A-204ENST00000366816 ARHGEF5Q12774 1597 aa30.87■■■□□ 2.53
H3F3A-204ENST00000366816 RTEL1-TNFRSF6BF6WH68 1400 aa30.85■■■□□ 2.53
H3F3A-204ENST00000366816 FGD6Q6ZV73 1430 aa30.85■■■□□ 2.53
H3F3A-204ENST00000366816 TSPY4P0CV99 314 aa30.85■■■□□ 2.53
H3F3A-204ENST00000366816 TSPY10P0CW01 314 aa30.85■■■□□ 2.53
H3F3A-204ENST00000366816 PLPPR3Q6T4P5 718 aa30.84■■■□□ 2.53
H3F3A-204ENST00000366816 PTPN23Q9H3S7 1636 aa30.84■■■□□ 2.53
H3F3A-204ENST00000366816 RIMS1Q86UR5 1692 aaKnown RBP30.83■■■□□ 2.53
H3F3A-204ENST00000366816 A2MP01023 1474 aa30.82■■■□□ 2.53
H3F3A-204ENST00000366816 AGLP35573 1532 aa30.82■■■□□ 2.52
H3F3A-204ENST00000366816 FER1L4A9Z1Z3 1794 aa30.76■■■□□ 2.51
H3F3A-204ENST00000366816 TCOF1Q13428 1488 aaKnown RBP30.76■■■□□ 2.51
H3F3A-204ENST00000366816 PLXNC1O60486 1568 aa30.75■■■□□ 2.51
H3F3A-204ENST00000366816 ADGBQ8N7X0 1667 aa30.74■■■□□ 2.51
H3F3A-204ENST00000366816 FAM50AQ14320 339 aaKnown RBP30.74■■■□□ 2.51
H3F3A-204ENST00000366816 ABCC5O15440 1437 aa30.73■■■□□ 2.51
H3F3A-204ENST00000366816 DHX29Q7Z478 1369 aaKnown RBP30.73■■■□□ 2.51
H3F3A-204ENST00000366816 CEBPAP49715 358 aaPredicted RBP30.71■■■□□ 2.51
H3F3A-204ENST00000366816 GGT6Q6P531 493 aa30.71■■■□□ 2.51
H3F3A-204ENST00000366816 MAST1Q9Y2H9 1570 aa30.69■■■□□ 2.5
H3F3A-204ENST00000366816 DAPK1P53355 1430 aa30.68■■■□□ 2.5
H3F3A-204ENST00000366816 ESF1Q9H501 851 aaKnown RBP30.68■■■□□ 2.5
H3F3A-204ENST00000366816 KIF3BO15066 747 aa30.66■■■□□ 2.5
H3F3A-204ENST00000366816 CHIC2Q9UKJ5 165 aa30.66■■■□□ 2.5
H3F3A-204ENST00000366816 DNMT1P26358 1616 aaKnown RBP30.65■■■□□ 2.5
H3F3A-204ENST00000366816 RRP7BPQ9NSQ0 103 aa30.62■■■□□ 2.49
H3F3A-204ENST00000366816 CROCC2H7BZ55 1655 aa30.62■■■□□ 2.49
H3F3A-204ENST00000366816 SHANK2Q9UPX8 1470 aa30.6■■■□□ 2.49
H3F3A-204ENST00000366816 KIF15Q9NS87 1388 aa30.55■■■□□ 2.48
H3F3A-204ENST00000366816 CNTLNQ9NXG0 1405 aa30.55■■■□□ 2.48
H3F3A-204ENST00000366816 ZMYM3Q14202 1370 aa30.52■■■□□ 2.48
H3F3A-204ENST00000366816 C3P01024 1663 aa30.52■■■□□ 2.48
H3F3A-204ENST00000366816 CLTCQ00610 1675 aaKnown RBP30.52■■■□□ 2.48
H3F3A-204ENST00000366816 PPP6R1Q9UPN7 881 aa30.51■■■□□ 2.47
H3F3A-204ENST00000366816 ANKRD30AQ9BXX3 1397 aa30.51■■■□□ 2.47
H3F3A-204ENST00000366816 ITGAEP38570 1179 aa30.5■■■□□ 2.47
H3F3A-204ENST00000366816 DUOX2Q9NRD8 1548 aa30.5■■■□□ 2.47
H3F3A-204ENST00000366816 PTPRKQ15262 1439 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms