RNA–Protein interactions for RNA: ENST00000361917.5

COL11A2-202, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-202ENST00000361917 RTF1Q92541 710 aaKnown RBP18.95■□□□□ 0.62
COL11A2-202ENST00000361917 DRC7Q8IY82 874 aa18.95■□□□□ 0.62
COL11A2-202ENST00000361917 NCBP3Q53F19 620 aaKnown RBP18.94■□□□□ 0.62
COL11A2-202ENST00000361917 HSPA5P11021 654 aaKnown RBP18.93■□□□□ 0.62
COL11A2-202ENST00000361917 TRHP20396 242 aaPredicted RBP18.93■□□□□ 0.62
COL11A2-202ENST00000361917 CHAF1AQ13111 956 aaPredicted RBP18.91■□□□□ 0.62
COL11A2-202ENST00000361917 FOXD1Q16676 465 aa18.91■□□□□ 0.62
COL11A2-202ENST00000361917 MSNP26038 577 aaKnown RBP18.91■□□□□ 0.62
COL11A2-202ENST00000361917 HDGFP51858 240 aaKnown RBP18.91■□□□□ 0.62
COL11A2-202ENST00000361917 GNL2Q13823 731 aaKnown RBP18.9■□□□□ 0.62
COL11A2-202ENST00000361917 DEKP35659 375 aaKnown RBP18.89■□□□□ 0.61
COL11A2-202ENST00000361917 GGT6Q6P531 493 aa18.89■□□□□ 0.61
COL11A2-202ENST00000361917 FHAD1B1AJZ9 1412 aa18.88■□□□□ 0.61
COL11A2-202ENST00000361917 PAK3O75914 559 aaPredicted RBP18.87■□□□□ 0.61
COL11A2-202ENST00000361917 KTN1Q86UP2 1357 aaKnown RBP18.87■□□□□ 0.61
COL11A2-202ENST00000361917 HDGFL2Q7Z4V5 671 aaPredicted RBP18.86■□□□□ 0.61
COL11A2-202ENST00000361917 ZNF330Q9Y3S2 320 aaPredicted RBP18.86■□□□□ 0.61
COL11A2-202ENST00000361917 L1TD1Q5T7N2 865 aaKnown RBP18.86■□□□□ 0.61
COL11A2-202ENST00000361917 RBM19Q9Y4C8 960 aaKnown RBP18.86■□□□□ 0.61
COL11A2-202ENST00000361917 PKD2Q13563 968 aa18.85■□□□□ 0.61
COL11A2-202ENST00000361917 ITPRIPQ8IWB1 547 aa18.85■□□□□ 0.61
COL11A2-202ENST00000361917 KIAA1211Q6ZU35 1233 aa18.83■□□□□ 0.61
COL11A2-202ENST00000361917 CARMIL1Q5VZK9 1371 aa18.83■□□□□ 0.6
COL11A2-202ENST00000361917 SETD5Q9C0A6 1442 aa18.82■□□□□ 0.6
COL11A2-202ENST00000361917 CCER2I3L3R5 266 aa18.82■□□□□ 0.6
COL11A2-202ENST00000361917 CUX2O14529 1486 aa18.82■□□□□ 0.6
COL11A2-202ENST00000361917 IPO8O15397 1037 aaKnown RBP18.82■□□□□ 0.6
COL11A2-202ENST00000361917 U2AF1L5P0DN76 240 aaPredicted RBP18.82■□□□□ 0.6
COL11A2-202ENST00000361917 U2AF1Q01081 240 aaKnown RBP eCLIP18.82■□□□□ 0.6
COL11A2-202ENST00000361917 ARHGAP35Q9NRY4 1499 aa18.81■□□□□ 0.6
COL11A2-202ENST00000361917 ROCK2O75116 1388 aaKnown RBP18.8■□□□□ 0.6
COL11A2-202ENST00000361917 CSB-PGBD3P0DP91 1061 aa18.8■□□□□ 0.6
COL11A2-202ENST00000361917 CFAP44Q96MT7 982 aa18.8■□□□□ 0.6
COL11A2-202ENST00000361917 GZF1Q9H116 711 aaPredicted RBP18.79■□□□□ 0.6
COL11A2-202ENST00000361917 RCAN3Q9UKA8 241 aa18.78■□□□□ 0.6
COL11A2-202ENST00000361917 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.77■□□□□ 0.6
COL11A2-202ENST00000361917 SOGA1O94964 1423 aa18.77■□□□□ 0.59
COL11A2-202ENST00000361917 SLKQ9H2G2 1235 aaPredicted RBP18.76■□□□□ 0.59
COL11A2-202ENST00000361917 RWDD1Q9H446 243 aaPredicted RBP18.75■□□□□ 0.59
COL11A2-202ENST00000361917 ARID3AQ99856 593 aa18.75■□□□□ 0.59
COL11A2-202ENST00000361917 GBP4Q96PP9 640 aa18.74■□□□□ 0.59
COL11A2-202ENST00000361917 CHMP3Q9Y3E7 222 aa18.73■□□□□ 0.59
COL11A2-202ENST00000361917 TIMELESSQ9UNS1 1208 aa18.73■□□□□ 0.59
COL11A2-202ENST00000361917 CALD1Q05682 793 aaKnown RBP18.73■□□□□ 0.59
COL11A2-202ENST00000361917 MFAP1P55081 439 aaKnown RBP18.72■□□□□ 0.59
COL11A2-202ENST00000361917 KANK4Q5T7N3 995 aaPredicted RBP18.71■□□□□ 0.59
COL11A2-202ENST00000361917 HSP90B1P14625 803 aaKnown RBP18.71■□□□□ 0.59
COL11A2-202ENST00000361917 KIAA2012Q0VF49 1180 aa18.7■□□□□ 0.58
COL11A2-202ENST00000361917 CCDC146Q8IYE0 955 aa18.7■□□□□ 0.58
COL11A2-202ENST00000361917 GORABQ5T7V8 394 aa18.69■□□□□ 0.58
COL11A2-202ENST00000361917 TRIM6-TRIM34B2RNG4 842 aa18.69■□□□□ 0.58
COL11A2-202ENST00000361917 RALBP1Q15311 655 aa18.69■□□□□ 0.58
COL11A2-202ENST00000361917 MPHOSPH9Q99550 1183 aa18.69■□□□□ 0.58
COL11A2-202ENST00000361917 NUTM2DQ5VT03 806 aaPredicted RBP18.69■□□□□ 0.58
COL11A2-202ENST00000361917 SMC4Q9NTJ3 1288 aa18.68■□□□□ 0.58
COL11A2-202ENST00000361917 NUP155O75694 1391 aa18.68■□□□□ 0.58
COL11A2-202ENST00000361917 STK31Q9BXU1 1019 aa18.68■□□□□ 0.58
COL11A2-202ENST00000361917 BAZ1AQ9NRL2 1556 aaPredicted RBP18.67■□□□□ 0.58
COL11A2-202ENST00000361917 NOL8Q76FK4 1167 aaKnown RBP18.67■□□□□ 0.58
COL11A2-202ENST00000361917 TSHZ2Q9NRE2 1034 aa18.67■□□□□ 0.58
COL11A2-202ENST00000361917 FOXD4L1Q9NU39 408 aa18.67■□□□□ 0.58
COL11A2-202ENST00000361917 SPAG9O60271 1321 aaKnown RBP18.66■□□□□ 0.58
COL11A2-202ENST00000361917 PTMSP20962 102 aa18.66■□□□□ 0.58
COL11A2-202ENST00000361917 CCDC9Q9Y3X0 531 aaKnown RBP18.66■□□□□ 0.58
COL11A2-202ENST00000361917 SLC4A10Q6U841 1118 aa18.66■□□□□ 0.58
COL11A2-202ENST00000361917 PMFBP1Q8TBY8 1022 aa18.66■□□□□ 0.58
COL11A2-202ENST00000361917 TAF7LQ5H9L4 462 aa18.66■□□□□ 0.58
COL11A2-202ENST00000361917 NOC3LQ8WTT2 800 aaKnown RBP18.65■□□□□ 0.58
COL11A2-202ENST00000361917 CLUAP1Q96AJ1 413 aa18.64■□□□□ 0.58
COL11A2-202ENST00000361917 HTATSF1O43719 755 aaKnown RBP18.64■□□□□ 0.57
COL11A2-202ENST00000361917 GPATCH3Q96I76 525 aa18.64■□□□□ 0.57
COL11A2-202ENST00000361917 RAB3GAP2Q9H2M9 1393 aa18.64■□□□□ 0.57
COL11A2-202ENST00000361917 EIF3AQ14152 1382 aaKnown RBP18.63■□□□□ 0.57
COL11A2-202ENST00000361917 TCERG1O14776 1098 aaKnown RBP18.63■□□□□ 0.57
COL11A2-202ENST00000361917 SYAP1Q96A49 352 aaPredicted RBP18.62■□□□□ 0.57
COL11A2-202ENST00000361917 TMX4Q9H1E5 349 aaPredicted RBP18.62■□□□□ 0.57
COL11A2-202ENST00000361917 VPS8Q8N3P4 1428 aa18.62■□□□□ 0.57
COL11A2-202ENST00000361917 CARMIL2Q6F5E8 1435 aa18.61■□□□□ 0.57
COL11A2-202ENST00000361917 TPM4P67936 248 aa18.6■□□□□ 0.57
COL11A2-202ENST00000361917 PDE4CQ08493 712 aa18.6■□□□□ 0.57
COL11A2-202ENST00000361917 CECR2Q9BXF3 1484 aa18.59■□□□□ 0.57
COL11A2-202ENST00000361917 ANKRD30AQ9BXX3 1397 aa18.59■□□□□ 0.57
COL11A2-202ENST00000361917 LTV1Q96GA3 475 aaPredicted RBP18.59■□□□□ 0.57
COL11A2-202ENST00000361917 ABCC8Q09428 1581 aa18.59■□□□□ 0.57
COL11A2-202ENST00000361917 KIF3BO15066 747 aa18.58■□□□□ 0.57
COL11A2-202ENST00000361917 CREBRFQ8IUR6 639 aa18.58■□□□□ 0.57
COL11A2-202ENST00000361917 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.58■□□□□ 0.57
COL11A2-202ENST00000361917 HMMRO75330 724 aa18.58■□□□□ 0.56
COL11A2-202ENST00000361917 HNRNPMP52272 730 aaKnown RBP eCLIP18.57■□□□□ 0.56
COL11A2-202ENST00000361917 TERF2IPQ9NYB0 399 aa18.57■□□□□ 0.56
COL11A2-202ENST00000361917 GOLGA6L3A6NEY3 463 aa18.57■□□□□ 0.56
COL11A2-202ENST00000361917 RASSF8Q8NHQ8 419 aa18.57■□□□□ 0.56
COL11A2-202ENST00000361917 NUTM2FA1L443 756 aa18.56■□□□□ 0.56
COL11A2-202ENST00000361917 EFCAB2Q5VUJ9 269 aa18.56■□□□□ 0.56
COL11A2-202ENST00000361917 FOXD4L5Q5VV16 416 aaPredicted RBP18.56■□□□□ 0.56
COL11A2-202ENST00000361917 FOXD4L4Q8WXT5 416 aaPredicted RBP18.56■□□□□ 0.56
COL11A2-202ENST00000361917 CENPJQ9HC77 1338 aaPredicted RBP18.56■□□□□ 0.56
COL11A2-202ENST00000361917 NGDNQ8NEJ9 315 aaKnown RBP18.56■□□□□ 0.56
COL11A2-202ENST00000361917 AMPHP49418 695 aa18.55■□□□□ 0.56
COL11A2-202ENST00000361917 G3V3G9 751 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms