RNA–Protein interactions for RNA: ENST00000361059.7

MATR3-229, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MATR3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-229ENST00000361059 KCNH8Q96L42 1107 aa11.57□□□□□ -0.56
MATR3-229ENST00000361059 ARHGEF11O15085 1522 aa11.57□□□□□ -0.56
MATR3-229ENST00000361059 DAPK1P53355 1430 aa11.56□□□□□ -0.56
MATR3-229ENST00000361059 FOXD1Q16676 465 aa11.55□□□□□ -0.56
MATR3-229ENST00000361059 ANKRD30AQ9BXX3 1397 aa11.54□□□□□ -0.56
MATR3-229ENST00000361059 ABCC5O15440 1437 aa11.53□□□□□ -0.56
MATR3-229ENST00000361059 ATP10BO94823 1461 aa11.52□□□□□ -0.57
MATR3-229ENST00000361059 AKNAQ7Z591 1439 aa11.52□□□□□ -0.57
MATR3-229ENST00000361059 ROCK1Q13464 1354 aa11.52□□□□□ -0.57
MATR3-229ENST00000361059 HNRNPMP52272 730 aaKnown RBP eCLIP11.52□□□□□ -0.574e-9■■■■■ 28.9
MATR3-229ENST00000361059 SCAF1Q9H7N4 1312 aaKnown RBP11.51□□□□□ -0.57
MATR3-229ENST00000361059 GPATCH8Q9UKJ3 1502 aaKnown RBP11.51□□□□□ -0.57
MATR3-229ENST00000361059 GTF3C3Q9Y5Q9 886 aa11.51□□□□□ -0.57
MATR3-229ENST00000361059 CAMSAP2Q08AD1 1489 aa11.5□□□□□ -0.57
MATR3-229ENST00000361059 MYT1LQ9UL68 1186 aa11.5□□□□□ -0.57
MATR3-229ENST00000361059 ANP32CO43423 234 aa11.5□□□□□ -0.57
MATR3-229ENST00000361059 ZNF326Q5BKZ1 582 aaKnown RBP11.49□□□□□ -0.57
MATR3-229ENST00000361059 KIF14Q15058 1648 aa11.48□□□□□ -0.57
MATR3-229ENST00000361059 ITSN2Q9NZM3 1697 aa11.48□□□□□ -0.57
MATR3-229ENST00000361059 EIF4G2P78344 907 aaKnown RBP eCLIP11.47□□□□□ -0.57
MATR3-229ENST00000361059 RSPH4AQ5TD94 716 aa11.47□□□□□ -0.57
MATR3-229ENST00000361059 L3MBTL2Q969R5 705 aa11.47□□□□□ -0.57
MATR3-229ENST00000361059 PKD2Q13563 968 aa11.47□□□□□ -0.57
MATR3-229ENST00000361059 CHD1O14646 1710 aa11.47□□□□□ -0.57
MATR3-229ENST00000361059 ABCA8O94911 1581 aa11.47□□□□□ -0.57
MATR3-229ENST00000361059 DNMT1P26358 1616 aaKnown RBP11.46□□□□□ -0.58
MATR3-229ENST00000361059 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.45□□□□□ -0.582e-7■■■□□ 18.1
MATR3-229ENST00000361059 NUP155O75694 1391 aa11.45□□□□□ -0.58
MATR3-229ENST00000361059 NCOA1Q15788 1441 aa11.45□□□□□ -0.58
MATR3-229ENST00000361059 ANKRD50Q9ULJ7 1429 aa11.45□□□□□ -0.58
MATR3-229ENST00000361059 GCC2Q8IWJ2 1684 aa11.44□□□□□ -0.58
MATR3-229ENST00000361059 NPM1P06748 294 aaKnown RBP eCLIP11.44□□□□□ -0.58
MATR3-229ENST00000361059 EFCAB2Q5VUJ9 269 aa11.43□□□□□ -0.58
MATR3-229ENST00000361059 C9orf84Q5VXU9 1444 aa11.43□□□□□ -0.58
MATR3-229ENST00000361059 POLR3GLQ9BT43 218 aa11.43□□□□□ -0.58
MATR3-229ENST00000361059 HSPA5P11021 654 aaKnown RBP11.42□□□□□ -0.58
MATR3-229ENST00000361059 KIF15Q9NS87 1388 aa11.42□□□□□ -0.58
MATR3-229ENST00000361059 KDM6BO15054 1643 aa11.4□□□□□ -0.58
MATR3-229ENST00000361059 ARHGAP5Q13017 1502 aa11.4□□□□□ -0.58
MATR3-229ENST00000361059 ANKRD30BQ9BXX2 1392 aa11.39□□□□□ -0.59
MATR3-229ENST00000361059 KDM2AQ9Y2K7 1162 aa11.39□□□□□ -0.59
MATR3-229ENST00000361059 ABCC10Q5T3U5 1492 aa11.39□□□□□ -0.59
MATR3-229ENST00000361059 ADCY10Q96PN6 1610 aa11.39□□□□□ -0.59
MATR3-229ENST00000361059 OSCARQ8IYS5 282 aa11.38□□□□□ -0.59
MATR3-229ENST00000361059 ABCC2Q92887 1545 aa11.37□□□□□ -0.59
MATR3-229ENST00000361059 CCDC141Q6ZP82 1450 aa11.37□□□□□ -0.59
MATR3-229ENST00000361059 KIAA1107Q9UPP5 1409 aa11.36□□□□□ -0.59
MATR3-229ENST00000361059 ADGRL2O95490 1459 aa11.35□□□□□ -0.59
MATR3-229ENST00000361059 ERCC6L2Q5T890 1561 aa11.35□□□□□ -0.59
MATR3-229ENST00000361059 CDC42BPAQ5VT25 1732 aa11.35□□□□□ -0.59
MATR3-229ENST00000361059 RPRD2Q5VT52 1461 aaKnown RBP11.34□□□□□ -0.59
MATR3-229ENST00000361059 PLEKHH2Q8IVE3 1493 aa11.34□□□□□ -0.59
MATR3-229ENST00000361059 ADGBQ8N7X0 1667 aa11.34□□□□□ -0.59
MATR3-229ENST00000361059 CNGB1Q14028 1251 aaPredicted RBP11.34□□□□□ -0.59
MATR3-229ENST00000361059 RGL3Q3MIN7 710 aa11.34□□□□□ -0.59
MATR3-229ENST00000361059 SHANK2Q9UPX8 1470 aa11.33□□□□□ -0.59
MATR3-229ENST00000361059 NBPF8Q3BBV2 869 aa11.33□□□□□ -0.6
MATR3-229ENST00000361059 DCAF11Q8TEB1 546 aa11.33□□□□□ -0.6
MATR3-229ENST00000361059 SPAG9O60271 1321 aaKnown RBP11.33□□□□□ -0.6
MATR3-229ENST00000361059 CCER2I3L3R5 266 aa11.32□□□□□ -0.6
MATR3-229ENST00000361059 SHROOM2Q13796 1616 aa11.32□□□□□ -0.6
MATR3-229ENST00000361059 PZPP20742 1482 aa11.32□□□□□ -0.6
MATR3-229ENST00000361059 CARD11Q9BXL7 1154 aa11.31□□□□□ -0.6
MATR3-229ENST00000361059 DENND4BO75064 1496 aaPredicted RBP11.31□□□□□ -0.6
MATR3-229ENST00000361059 SYCP2Q9BX26 1530 aa11.3□□□□□ -0.6
MATR3-229ENST00000361059 MBD5Q9P267 1494 aa11.29□□□□□ -0.6
MATR3-229ENST00000361059 PLCH2O75038 1416 aa11.29□□□□□ -0.6
MATR3-229ENST00000361059 AFAP1Q8N556 730 aa11.29□□□□□ -0.6
MATR3-229ENST00000361059 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.29□□□□□ -0.62e-7■□□□□ 10.6
MATR3-229ENST00000361059 WASHC2AQ641Q2 1341 aa11.28□□□□□ -0.6
MATR3-229ENST00000361059 ARHGEF5Q12774 1597 aa11.28□□□□□ -0.6
MATR3-229ENST00000361059 PELP1Q8IZL8 1130 aaKnown RBP11.28□□□□□ -0.6
MATR3-229ENST00000361059 PREX2Q70Z35 1606 aa11.27□□□□□ -0.6
MATR3-229ENST00000361059 NEFLP07196 543 aa11.27□□□□□ -0.6
MATR3-229ENST00000361059 CLASP1Q7Z460 1538 aa11.27□□□□□ -0.6
MATR3-229ENST00000361059 CCDC144AA2RUR9 1427 aa11.27□□□□□ -0.6
MATR3-229ENST00000361059 SAMD9LQ8IVG5 1584 aa11.27□□□□□ -0.61
MATR3-229ENST00000361059 CROCC2H7BZ55 1655 aa11.27□□□□□ -0.61
MATR3-229ENST00000361059 UHRF1BP1LA0JNW5 1464 aa11.27□□□□□ -0.61
MATR3-229ENST00000361059 TTC37Q6PGP7 1564 aa11.26□□□□□ -0.61
MATR3-229ENST00000361059 KDM5BQ9UGL1 1544 aa11.26□□□□□ -0.61
MATR3-229ENST00000361059 MYO5CQ9NQX4 1742 aa11.25□□□□□ -0.61
MATR3-229ENST00000361059 CDC42BPBQ9Y5S2 1711 aa11.25□□□□□ -0.61
MATR3-229ENST00000361059 USP47Q96K76 1375 aa11.24□□□□□ -0.61
MATR3-229ENST00000361059 CCDC7Q96M83 1385 aa11.24□□□□□ -0.61
MATR3-229ENST00000361059 ZCCHC11Q5TAX3 1644 aaKnown RBP11.24□□□□□ -0.61
MATR3-229ENST00000361059 KANK1Q14678 1352 aa11.24□□□□□ -0.61
MATR3-229ENST00000361059 KIF3BO15066 747 aa11.24□□□□□ -0.61
MATR3-229ENST00000361059 HNRNPUQ00839 825 aaKnown RBP eCLIP11.24□□□□□ -0.61
MATR3-229ENST00000361059 TEX14Q8IWB6 1497 aa11.23□□□□□ -0.61
MATR3-229ENST00000361059 WDR7Q9Y4E6 1490 aa11.22□□□□□ -0.61
MATR3-229ENST00000361059 MRS2Q9HD23 443 aa11.22□□□□□ -0.61
MATR3-229ENST00000361059 ROCK2O75116 1388 aaKnown RBP11.22□□□□□ -0.61
MATR3-229ENST00000361059 KIF7Q2M1P5 1343 aa11.22□□□□□ -0.61
MATR3-229ENST00000361059 FAM9BQ8IZU0 186 aa11.21□□□□□ -0.61
MATR3-229ENST00000361059 C11orf95C9JLR9 678 aaPredicted RBP11.21□□□□□ -0.61
MATR3-229ENST00000361059 TRAPPC8Q9Y2L5 1435 aa11.21□□□□□ -0.61
MATR3-229ENST00000361059 FAM135AQ9P2D6 1515 aa11.21□□□□□ -0.62
MATR3-229ENST00000361059 SCAPERQ9BY12 1400 aa11.2□□□□□ -0.62
MATR3-229ENST00000361059 CNTLNQ9NXG0 1405 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms