RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 GPATCH8Q9UKJ3 1502 aaKnown RBP19.15■□□□□ 0.66
NIF3L1-201ENST00000359683 PHLDB1Q86UU1 1377 aa19.15■□□□□ 0.66
NIF3L1-201ENST00000359683 PLCH2O75038 1416 aa19.14■□□□□ 0.66
NIF3L1-201ENST00000359683 ADGRL1O94910 1474 aa19.12■□□□□ 0.65
NIF3L1-201ENST00000359683 MYOM3Q5VTT5 1437 aa19.12■□□□□ 0.65
NIF3L1-201ENST00000359683 CDC42BPAQ5VT25 1732 aa19.11■□□□□ 0.65
NIF3L1-201ENST00000359683 MYO5CQ9NQX4 1742 aa19.1■□□□□ 0.65
NIF3L1-201ENST00000359683 ARAP3Q8WWN8 1544 aa19.1■□□□□ 0.65
NIF3L1-201ENST00000359683 CFDP1Q9UEE9 299 aaPredicted RBP19.09■□□□□ 0.65
NIF3L1-201ENST00000359683 CDC42BPBQ9Y5S2 1711 aa19.09■□□□□ 0.65
NIF3L1-201ENST00000359683 PREX2Q70Z35 1606 aa19.08■□□□□ 0.65
NIF3L1-201ENST00000359683 EFCAB2Q5VUJ9 269 aa19.08■□□□□ 0.65
NIF3L1-201ENST00000359683 MIA2Q96PC5 1412 aa19.08■□□□□ 0.65
NIF3L1-201ENST00000359683 ITSN2Q9NZM3 1697 aa19.08■□□□□ 0.64
NIF3L1-201ENST00000359683 ARHGAP5Q13017 1502 aa19.05■□□□□ 0.64
NIF3L1-201ENST00000359683 FGD6Q6ZV73 1430 aa19.05■□□□□ 0.64
NIF3L1-201ENST00000359683 FANCAO15360 1455 aa19.04■□□□□ 0.64
NIF3L1-201ENST00000359683 ZNF777Q9ULD5 760 aaPredicted RBP19.02■□□□□ 0.64
NIF3L1-201ENST00000359683 ZNF644Q9H582 1327 aaPredicted RBP19.02■□□□□ 0.64
NIF3L1-201ENST00000359683 NEO1Q92859 1461 aa19.02■□□□□ 0.63
NIF3L1-201ENST00000359683 RRBP1Q9P2E9 1410 aaKnown RBP19.01■□□□□ 0.63
NIF3L1-201ENST00000359683 AKNAQ7Z591 1439 aa19■□□□□ 0.63
NIF3L1-201ENST00000359683 TCOF1Q13428 1488 aaKnown RBP18.99■□□□□ 0.63
NIF3L1-201ENST00000359683 PTPN23Q9H3S7 1636 aa18.99■□□□□ 0.63
NIF3L1-201ENST00000359683 CFAP74Q9C0B2 1584 aa18.99■□□□□ 0.63
NIF3L1-201ENST00000359683 SAMD9LQ8IVG5 1584 aa18.98■□□□□ 0.63
NIF3L1-201ENST00000359683 KIAA1107Q9UPP5 1409 aa18.98■□□□□ 0.63
NIF3L1-201ENST00000359683 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.97■□□□□ 0.63
NIF3L1-201ENST00000359683 CAMSAP2Q08AD1 1489 aa18.96■□□□□ 0.63
NIF3L1-201ENST00000359683 PLEKHH2Q8IVE3 1493 aa18.96■□□□□ 0.63
NIF3L1-201ENST00000359683 HNRNPMP52272 730 aaKnown RBP eCLIP18.94■□□□□ 0.62
NIF3L1-201ENST00000359683 FAM50AQ14320 339 aaKnown RBP18.94■□□□□ 0.62
NIF3L1-201ENST00000359683 ARHGEF12Q9NZN5 1544 aa18.94■□□□□ 0.62
NIF3L1-201ENST00000359683 SCAPERQ9BY12 1400 aa18.93■□□□□ 0.62
NIF3L1-201ENST00000359683 ABCC1P33527 1531 aa18.93■□□□□ 0.62
NIF3L1-201ENST00000359683 MBD5Q9P267 1494 aa18.93■□□□□ 0.62
NIF3L1-201ENST00000359683 RSPH4AQ5TD94 716 aa18.92■□□□□ 0.62
NIF3L1-201ENST00000359683 SYCP2Q9BX26 1530 aa18.9■□□□□ 0.62
NIF3L1-201ENST00000359683 HECW2Q9P2P5 1572 aa18.89■□□□□ 0.61
NIF3L1-201ENST00000359683 DENND4BO75064 1496 aaPredicted RBP18.89■□□□□ 0.61
NIF3L1-201ENST00000359683 TRAPPC8Q9Y2L5 1435 aa18.88■□□□□ 0.61
NIF3L1-201ENST00000359683 ARHGEF5Q12774 1597 aa18.88■□□□□ 0.61
NIF3L1-201ENST00000359683 FRMPD1Q5SYB0 1578 aa18.88■□□□□ 0.61
NIF3L1-201ENST00000359683 AFAP1Q8N556 730 aa18.87■□□□□ 0.61
NIF3L1-201ENST00000359683 ABCC5O15440 1437 aa18.86■□□□□ 0.61
NIF3L1-201ENST00000359683 RAPGEF3O95398 923 aa18.86■□□□□ 0.61
NIF3L1-201ENST00000359683 TRIM26Q12899 539 aaPredicted RBP18.86■□□□□ 0.61
NIF3L1-201ENST00000359683 POGZQ7Z3K3 1410 aa18.86■□□□□ 0.61
NIF3L1-201ENST00000359683 DAPK1P53355 1430 aa18.85■□□□□ 0.61
NIF3L1-201ENST00000359683 CCDC141Q6ZP82 1450 aa18.85■□□□□ 0.61
NIF3L1-201ENST00000359683 DNMT1P26358 1616 aaKnown RBP18.84■□□□□ 0.61
NIF3L1-201ENST00000359683 ZNF518AQ6AHZ1 1483 aa18.83■□□□□ 0.61
NIF3L1-201ENST00000359683 TSPY4P0CV99 314 aa18.83■□□□□ 0.61
NIF3L1-201ENST00000359683 TSPY10P0CW01 314 aa18.83■□□□□ 0.61
NIF3L1-201ENST00000359683 RICTORQ6R327 1708 aa18.82■□□□□ 0.6
NIF3L1-201ENST00000359683 PTPRKQ15262 1439 aa18.81■□□□□ 0.6
NIF3L1-201ENST00000359683 ITGAEP38570 1179 aa18.81■□□□□ 0.6
NIF3L1-201ENST00000359683 ADAMTSL3P82987 1691 aa18.8■□□□□ 0.6
NIF3L1-201ENST00000359683 KDM5CP41229 1560 aa18.8■□□□□ 0.6
NIF3L1-201ENST00000359683 ARHGEF40Q8TER5 1519 aa18.79■□□□□ 0.6
NIF3L1-201ENST00000359683 SPAG9O60271 1321 aaKnown RBP18.79■□□□□ 0.6
NIF3L1-201ENST00000359683 SHANK2Q9UPX8 1470 aa18.79■□□□□ 0.6
NIF3L1-201ENST00000359683 RTEL1-TNFRSF6BF6WH68 1400 aa18.78■□□□□ 0.6
NIF3L1-201ENST00000359683 MLH3Q9UHC1 1453 aa18.77■□□□□ 0.6
NIF3L1-201ENST00000359683 BCORL1Q5H9F3 1711 aa18.77■□□□□ 0.6
NIF3L1-201ENST00000359683 C9orf84Q5VXU9 1444 aa18.77■□□□□ 0.6
NIF3L1-201ENST00000359683 CROCC2H7BZ55 1655 aa18.77■□□□□ 0.6
NIF3L1-201ENST00000359683 MAST1Q9Y2H9 1570 aa18.77■□□□□ 0.6
NIF3L1-201ENST00000359683 ZMYM4Q5VZL5 1548 aa18.77■□□□□ 0.59
NIF3L1-201ENST00000359683 CHIC2Q9UKJ5 165 aa18.76■□□□□ 0.59
NIF3L1-201ENST00000359683 MSH5O43196 834 aa18.75■□□□□ 0.59
NIF3L1-201ENST00000359683 MAGI2Q86UL8 1455 aa18.75■□□□□ 0.59
NIF3L1-201ENST00000359683 MADDQ8WXG6 1647 aa18.74■□□□□ 0.59
NIF3L1-201ENST00000359683 ROCK1Q13464 1354 aa18.73■□□□□ 0.59
NIF3L1-201ENST00000359683 ADGRL2O95490 1459 aa18.73■□□□□ 0.59
NIF3L1-201ENST00000359683 INO80Q9ULG1 1556 aaPredicted RBP18.72■□□□□ 0.59
NIF3L1-201ENST00000359683 NCOA1Q15788 1441 aa18.72■□□□□ 0.59
NIF3L1-201ENST00000359683 KIDINS220Q9ULH0 1771 aa18.72■□□□□ 0.59
NIF3L1-201ENST00000359683 ATP7AQ04656 1500 aa18.72■□□□□ 0.59
NIF3L1-201ENST00000359683 ZFYVE16Q7Z3T8 1539 aa18.72■□□□□ 0.59
NIF3L1-201ENST00000359683 ANKRD30AQ9BXX3 1397 aa18.72■□□□□ 0.59
NIF3L1-201ENST00000359683 MYT1LQ9UL68 1186 aa18.71■□□□□ 0.59
NIF3L1-201ENST00000359683 PTPRMP28827 1452 aa18.71■□□□□ 0.58
NIF3L1-201ENST00000359683 RRP7BPQ9NSQ0 103 aa18.69■□□□□ 0.58
NIF3L1-201ENST00000359683 YEATS2Q9ULM3 1422 aa18.69■□□□□ 0.58
NIF3L1-201ENST00000359683 RIMS1Q86UR5 1692 aaKnown RBP18.69■□□□□ 0.58
NIF3L1-201ENST00000359683 ADGBQ8N7X0 1667 aa18.68■□□□□ 0.58
NIF3L1-201ENST00000359683 PLXNC1O60486 1568 aa18.68■□□□□ 0.58
NIF3L1-201ENST00000359683 SIGLEC1Q9BZZ2 1709 aa18.67■□□□□ 0.58
NIF3L1-201ENST00000359683 ARID4BQ4LE39 1312 aaPredicted RBP18.66■□□□□ 0.58
NIF3L1-201ENST00000359683 KIF15Q9NS87 1388 aa18.66■□□□□ 0.58
NIF3L1-201ENST00000359683 PCGF6Q9BYE7 350 aa18.65■□□□□ 0.58
NIF3L1-201ENST00000359683 DIP2CQ9Y2E4 1556 aa18.65■□□□□ 0.58
NIF3L1-201ENST00000359683 ABCA6Q8N139 1617 aa18.65■□□□□ 0.58
NIF3L1-201ENST00000359683 ATP10AO60312 1499 aa18.64■□□□□ 0.58
NIF3L1-201ENST00000359683 HFM1A2PYH4 1435 aa18.64■□□□□ 0.57
NIF3L1-201ENST00000359683 NAIPQ13075 1403 aa18.64■□□□□ 0.57
NIF3L1-201ENST00000359683 DHX29Q7Z478 1369 aaKnown RBP18.63■□□□□ 0.57
NIF3L1-201ENST00000359683 DUOX2Q9NRD8 1548 aa18.62■□□□□ 0.57
NIF3L1-201ENST00000359683 A2MP01023 1474 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms