RNA–Protein interactions for RNA: ENST00000359308.8

XRCC6-201, Transcript of X-ray repair cross complementing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC6, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-201ENST00000359308 CARMIL2Q6F5E8 1435 aa19.59■□□□□ 0.73
XRCC6-201ENST00000359308 ABCC5O15440 1437 aa19.59■□□□□ 0.73
XRCC6-201ENST00000359308 TROQ12816 1431 aaPredicted RBP19.59■□□□□ 0.73
XRCC6-201ENST00000359308 DNMT1P26358 1616 aaKnown RBP19.58■□□□□ 0.73
XRCC6-201ENST00000359308 FOXD1Q16676 465 aa19.57■□□□□ 0.72
XRCC6-201ENST00000359308 KCNH8Q96L42 1107 aa19.57■□□□□ 0.72
XRCC6-201ENST00000359308 KDM5BQ9UGL1 1544 aa19.56■□□□□ 0.72
XRCC6-201ENST00000359308 MPHOSPH9Q99550 1183 aa19.54■□□□□ 0.72
XRCC6-201ENST00000359308 ZNF777Q9ULD5 760 aaPredicted RBP19.53■□□□□ 0.72
XRCC6-201ENST00000359308 CAMSAP2Q08AD1 1489 aa19.53■□□□□ 0.72
XRCC6-201ENST00000359308 CFDP1Q9UEE9 299 aaPredicted RBP19.53■□□□□ 0.72
XRCC6-201ENST00000359308 GPATCH8Q9UKJ3 1502 aaKnown RBP19.52■□□□□ 0.71
XRCC6-201ENST00000359308 ROCK1Q13464 1354 aa19.5■□□□□ 0.71
XRCC6-201ENST00000359308 ITSN2Q9NZM3 1697 aa19.5■□□□□ 0.71
XRCC6-201ENST00000359308 ADCY10Q96PN6 1610 aa19.49■□□□□ 0.71
XRCC6-201ENST00000359308 ABCA8O94911 1581 aa19.49■□□□□ 0.71
XRCC6-201ENST00000359308 ATP10BO94823 1461 aa19.46■□□□□ 0.71
XRCC6-201ENST00000359308 CHD1O14646 1710 aa19.45■□□□□ 0.7
XRCC6-201ENST00000359308 PLEKHD1A6NEE1 506 aa19.43■□□□□ 0.7
XRCC6-201ENST00000359308 CDC42BPAQ5VT25 1732 aa19.43■□□□□ 0.7
XRCC6-201ENST00000359308 SLC4A1APQ9BWU0 796 aaKnown RBP19.41■□□□□ 0.7
XRCC6-201ENST00000359308 L3MBTL2Q969R5 705 aa19.41■□□□□ 0.7
XRCC6-201ENST00000359308 CROCC2H7BZ55 1655 aa19.41■□□□□ 0.7
XRCC6-201ENST00000359308 ADGBQ8N7X0 1667 aa19.41■□□□□ 0.7
XRCC6-201ENST00000359308 NCOA1Q15788 1441 aa19.4■□□□□ 0.7
XRCC6-201ENST00000359308 ANKRD30BQ9BXX2 1392 aa19.39■□□□□ 0.7
XRCC6-201ENST00000359308 ABCC10Q5T3U5 1492 aa19.39■□□□□ 0.69
XRCC6-201ENST00000359308 PTPRGP23470 1445 aa19.39■□□□□ 0.69
XRCC6-201ENST00000359308 PZPP20742 1482 aa19.36■□□□□ 0.69
XRCC6-201ENST00000359308 HSPA5P11021 654 aaKnown RBP19.35■□□□□ 0.69
XRCC6-201ENST00000359308 RPRD2Q5VT52 1461 aaKnown RBP19.35■□□□□ 0.69
XRCC6-201ENST00000359308 ADGRL2O95490 1459 aa19.34■□□□□ 0.69
XRCC6-201ENST00000359308 MYT1Q01538 1121 aa19.34■□□□□ 0.69
XRCC6-201ENST00000359308 TEX14Q8IWB6 1497 aa19.33■□□□□ 0.68
XRCC6-201ENST00000359308 ANP32CO43423 234 aa19.32■□□□□ 0.68
XRCC6-201ENST00000359308 ERCC6L2Q5T890 1561 aa19.32■□□□□ 0.68
XRCC6-201ENST00000359308 ANKRD30AQ9BXX3 1397 aa19.32■□□□□ 0.68
XRCC6-201ENST00000359308 NBPF8Q3BBV2 869 aa19.31■□□□□ 0.68
XRCC6-201ENST00000359308 C9orf84Q5VXU9 1444 aa19.3■□□□□ 0.68
XRCC6-201ENST00000359308 WASHC2AQ641Q2 1341 aa19.3■□□□□ 0.68
XRCC6-201ENST00000359308 ANKRD50Q9ULJ7 1429 aa19.3■□□□□ 0.68
XRCC6-201ENST00000359308 HNRNPMP52272 730 aaKnown RBP eCLIP19.29■□□□□ 0.68
XRCC6-201ENST00000359308 EIF4G2P78344 907 aaKnown RBP eCLIP19.28■□□□□ 0.68
XRCC6-201ENST00000359308 SHROOM2Q13796 1616 aa19.27■□□□□ 0.67
XRCC6-201ENST00000359308 PKD2Q13563 968 aa19.26■□□□□ 0.67
XRCC6-201ENST00000359308 CDC42BPBQ9Y5S2 1711 aa19.25■□□□□ 0.67
XRCC6-201ENST00000359308 SHANK2Q9UPX8 1470 aa19.24■□□□□ 0.67
XRCC6-201ENST00000359308 KIAA1107Q9UPP5 1409 aa19.24■□□□□ 0.67
XRCC6-201ENST00000359308 SAMD9LQ8IVG5 1584 aa19.24■□□□□ 0.67
XRCC6-201ENST00000359308 CCER2I3L3R5 266 aa19.24■□□□□ 0.67
XRCC6-201ENST00000359308 C11orf95C9JLR9 678 aaPredicted RBP19.23■□□□□ 0.67
XRCC6-201ENST00000359308 PREX2Q70Z35 1606 aa19.22■□□□□ 0.67
XRCC6-201ENST00000359308 TSPY4P0CV99 314 aa19.22■□□□□ 0.67
XRCC6-201ENST00000359308 TSPY10P0CW01 314 aa19.22■□□□□ 0.67
XRCC6-201ENST00000359308 TTC37Q6PGP7 1564 aa19.22■□□□□ 0.67
XRCC6-201ENST00000359308 NUP155O75694 1391 aa19.22■□□□□ 0.67
XRCC6-201ENST00000359308 MBD5Q9P267 1494 aa19.22■□□□□ 0.67
XRCC6-201ENST00000359308 KIF15Q9NS87 1388 aa19.21■□□□□ 0.67
XRCC6-201ENST00000359308 SUPT16HQ9Y5B9 1047 aaKnown RBP19.2■□□□□ 0.66
XRCC6-201ENST00000359308 ZNF326Q5BKZ1 582 aaKnown RBP19.19■□□□□ 0.66
XRCC6-201ENST00000359308 ARHGEF5Q12774 1597 aa19.18■□□□□ 0.66
XRCC6-201ENST00000359308 SYCP2Q9BX26 1530 aa19.17■□□□□ 0.66
XRCC6-201ENST00000359308 CCDC141Q6ZP82 1450 aa19.17■□□□□ 0.66
XRCC6-201ENST00000359308 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.16■□□□□ 0.66
XRCC6-201ENST00000359308 ABCC2Q92887 1545 aa19.16■□□□□ 0.66
XRCC6-201ENST00000359308 ARHGAP5Q13017 1502 aa19.16■□□□□ 0.66
XRCC6-201ENST00000359308 CCDC7Q96M83 1385 aa19.15■□□□□ 0.66
XRCC6-201ENST00000359308 SPATA31E1Q6ZUB1 1445 aa19.13■□□□□ 0.65
XRCC6-201ENST00000359308 CNTLNQ9NXG0 1405 aa19.13■□□□□ 0.65
XRCC6-201ENST00000359308 KDM5DQ9BY66 1539 aa19.11■□□□□ 0.65
XRCC6-201ENST00000359308 CLASP1Q7Z460 1538 aa19.1■□□□□ 0.65
XRCC6-201ENST00000359308 MYO5CQ9NQX4 1742 aa19.1■□□□□ 0.65
XRCC6-201ENST00000359308 KIF7Q2M1P5 1343 aa19.09■□□□□ 0.65
XRCC6-201ENST00000359308 ZCCHC11Q5TAX3 1644 aaKnown RBP19.08■□□□□ 0.64
XRCC6-201ENST00000359308 FAM135AQ9P2D6 1515 aa19.06■□□□□ 0.64
XRCC6-201ENST00000359308 CCDC184Q52MB2 194 aa19.06■□□□□ 0.64
XRCC6-201ENST00000359308 USP47Q96K76 1375 aa19.06■□□□□ 0.64
XRCC6-201ENST00000359308 POLR1AO95602 1720 aaPredicted RBP19.05■□□□□ 0.64
XRCC6-201ENST00000359308 KDM2AQ9Y2K7 1162 aa19.04■□□□□ 0.64
XRCC6-201ENST00000359308 ARHGEF12Q9NZN5 1544 aa19.04■□□□□ 0.64
XRCC6-201ENST00000359308 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.04■□□□□ 0.641e-8■■■□□ 15.6
XRCC6-201ENST00000359308 BCORL1Q5H9F3 1711 aa19.03■□□□□ 0.64
XRCC6-201ENST00000359308 POLR3GLQ9BT43 218 aa19.03■□□□□ 0.64
XRCC6-201ENST00000359308 RSPH4AQ5TD94 716 aa19.02■□□□□ 0.64
XRCC6-201ENST00000359308 BCANQ96GW7 911 aa19.02■□□□□ 0.64
XRCC6-201ENST00000359308 HNRNPUQ00839 825 aaKnown RBP eCLIP19.02■□□□□ 0.63
XRCC6-201ENST00000359308 KDM5CP41229 1560 aa19.01■□□□□ 0.63
XRCC6-201ENST00000359308 MAST1Q9Y2H9 1570 aa19.01■□□□□ 0.63
XRCC6-201ENST00000359308 PRKRIP1Q9H875 184 aaPredicted RBP19.01■□□□□ 0.63
XRCC6-201ENST00000359308 CNGB1Q14028 1251 aaPredicted RBP19■□□□□ 0.63
XRCC6-201ENST00000359308 DCAF11Q8TEB1 546 aa19■□□□□ 0.63
XRCC6-201ENST00000359308 PLEKHH2Q8IVE3 1493 aa18.99■□□□□ 0.63
XRCC6-201ENST00000359308 FKBP8Q14318 412 aa18.99■□□□□ 0.63
XRCC6-201ENST00000359308 RALGAPBQ86X10 1494 aa18.98■□□□□ 0.63
XRCC6-201ENST00000359308 UHRF1BP1Q6BDS2 1440 aa18.98■□□□□ 0.63
XRCC6-201ENST00000359308 PLCH2O75038 1416 aa18.97■□□□□ 0.63
XRCC6-201ENST00000359308 UNC13BO14795 1591 aa18.97■□□□□ 0.63
XRCC6-201ENST00000359308 PLXNC1O60486 1568 aa18.96■□□□□ 0.63
XRCC6-201ENST00000359308 UHRF1BP1LA0JNW5 1464 aa18.96■□□□□ 0.63
XRCC6-201ENST00000359308 CARD11Q9BXL7 1154 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms