RNA–Protein interactions for RNA: ENST00000359171.8

NUP98-203, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 7,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-203ENST00000359171 KIF27Q86VH2 1401 aa18.38■□□□□ 0.53
NUP98-203ENST00000359171 SLKQ9H2G2 1235 aaPredicted RBP18.38■□□□□ 0.53
NUP98-203ENST00000359171 AMER1Q5JTC6 1135 aaPredicted RBP18.37■□□□□ 0.53
NUP98-203ENST00000359171 TNNT3P45378 269 aaPredicted RBP18.37■□□□□ 0.53
NUP98-203ENST00000359171 GZF1Q9H116 711 aaPredicted RBP18.36■□□□□ 0.53
NUP98-203ENST00000359171 KIAA1211Q6ZU35 1233 aa18.36■□□□□ 0.53
NUP98-203ENST00000359171 KTN1Q86UP2 1357 aaKnown RBP18.36■□□□□ 0.53
NUP98-203ENST00000359171 MORC1Q86VD1 984 aa18.35■□□□□ 0.53
NUP98-203ENST00000359171 HSPA5P11021 654 aaKnown RBP18.34■□□□□ 0.53
NUP98-203ENST00000359171 GOLGA2Q08379 1002 aa18.34■□□□□ 0.53
NUP98-203ENST00000359171 DCAF11Q8TEB1 546 aa18.34■□□□□ 0.53
NUP98-203ENST00000359171 GNL2Q13823 731 aaKnown RBP18.32■□□□□ 0.52
NUP98-203ENST00000359171 USP35Q9P2H5 1018 aa18.31■□□□□ 0.52
NUP98-203ENST00000359171 RALBP1Q15311 655 aa18.31■□□□□ 0.52
NUP98-203ENST00000359171 PMFBP1Q8TBY8 1022 aa18.31■□□□□ 0.52
NUP98-203ENST00000359171 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.3■□□□□ 0.52
NUP98-203ENST00000359171 TPM4P67936 248 aa18.29■□□□□ 0.52
NUP98-203ENST00000359171 CALD1Q05682 793 aaKnown RBP18.29■□□□□ 0.52
NUP98-203ENST00000359171 FHAD1B1AJZ9 1412 aa18.29■□□□□ 0.52
NUP98-203ENST00000359171 SETD5Q9C0A6 1442 aa18.26■□□□□ 0.51
NUP98-203ENST00000359171 RSPH6AQ9H0K4 717 aa18.26■□□□□ 0.51
NUP98-203ENST00000359171 ARID3AQ99856 593 aa18.26■□□□□ 0.51
NUP98-203ENST00000359171 CSPP1Q1MSJ5 1256 aa18.26■□□□□ 0.51
NUP98-203ENST00000359171 NPHP1O15259 732 aa18.25■□□□□ 0.51
NUP98-203ENST00000359171 LMOD2Q6P5Q4 547 aa18.25■□□□□ 0.51
NUP98-203ENST00000359171 CCDC34Q96HJ3 373 aa18.25■□□□□ 0.51
NUP98-203ENST00000359171 GOLGA6L1Q8N7Z2 621 aa18.25■□□□□ 0.51
NUP98-203ENST00000359171 ITPRIPQ8IWB1 547 aa18.25■□□□□ 0.51
NUP98-203ENST00000359171 RTF1Q92541 710 aaKnown RBP18.24■□□□□ 0.51
NUP98-203ENST00000359171 PDE3BQ13370 1112 aa18.23■□□□□ 0.51
NUP98-203ENST00000359171 HSP90AA2PQ14568 343 aaPredicted RBP18.23■□□□□ 0.51
NUP98-203ENST00000359171 MFAP1P55081 439 aaKnown RBP18.23■□□□□ 0.51
NUP98-203ENST00000359171 APBB1O00213 710 aa18.22■□□□□ 0.51
NUP98-203ENST00000359171 CHMP4AQ9BY43 222 aa18.22■□□□□ 0.51
NUP98-203ENST00000359171 KANK1Q14678 1352 aa18.22■□□□□ 0.51
NUP98-203ENST00000359171 SRPK2P78362 688 aaKnown RBP18.22■□□□□ 0.51
NUP98-203ENST00000359171 NOC3LQ8WTT2 800 aaKnown RBP18.21■□□□□ 0.51
NUP98-203ENST00000359171 PHF14O94880 888 aa18.2■□□□□ 0.5
NUP98-203ENST00000359171 DDX11L8A8MPP1 907 aa18.2■□□□□ 0.5
NUP98-203ENST00000359171 CLSTN1O94985 981 aa18.18■□□□□ 0.5
NUP98-203ENST00000359171 U2AF1L5P0DN76 240 aaPredicted RBP18.18■□□□□ 0.5
NUP98-203ENST00000359171 U2AF1Q01081 240 aaKnown RBP eCLIP18.18■□□□□ 0.51e-7■■□□□ 11.9
NUP98-203ENST00000359171 HMMRO75330 724 aa18.17■□□□□ 0.5
NUP98-203ENST00000359171 HDGFP51858 240 aaKnown RBP18.17■□□□□ 0.5
NUP98-203ENST00000359171 HDGFL2Q7Z4V5 671 aaPredicted RBP18.17■□□□□ 0.5
NUP98-203ENST00000359171 HDAC5Q9UQL6 1122 aa18.16■□□□□ 0.5
NUP98-203ENST00000359171 ST18O60284 1047 aa18.13■□□□□ 0.49
NUP98-203ENST00000359171 PKD2Q13563 968 aa18.12■□□□□ 0.49
NUP98-203ENST00000359171 GSE1Q14687 1217 aa18.12■□□□□ 0.49
NUP98-203ENST00000359171 SKOR2Q2VWA4 1001 aaPredicted RBP18.12■□□□□ 0.49
NUP98-203ENST00000359171 SMC4Q9NTJ3 1288 aa18.12■□□□□ 0.49
NUP98-203ENST00000359171 GPATCH3Q96I76 525 aa18.12■□□□□ 0.49
NUP98-203ENST00000359171 NLRP13Q86W25 1043 aa18.12■□□□□ 0.49
NUP98-203ENST00000359171 STK31Q9BXU1 1019 aa18.11■□□□□ 0.49
NUP98-203ENST00000359171 VPS8Q8N3P4 1428 aa18.1■□□□□ 0.49
NUP98-203ENST00000359171 TPM3P06753 285 aa18.1■□□□□ 0.49
NUP98-203ENST00000359171 KIF3AQ9Y496 699 aa18.1■□□□□ 0.49
NUP98-203ENST00000359171 CENPJQ9HC77 1338 aaPredicted RBP18.1■□□□□ 0.49
NUP98-203ENST00000359171 ISY1Q9ULR0 285 aaKnown RBP18.1■□□□□ 0.49
NUP98-203ENST00000359171 PHLDB1Q86UU1 1377 aa18.09■□□□□ 0.49
NUP98-203ENST00000359171 A0A0U1RQG5 324 aaPredicted RBP18.09■□□□□ 0.49
NUP98-203ENST00000359171 ARHGAP35Q9NRY4 1499 aa18.08■□□□□ 0.48
NUP98-203ENST00000359171 SOX12O15370 315 aa18.08■□□□□ 0.48
NUP98-203ENST00000359171 ROCK2O75116 1388 aaKnown RBP18.08■□□□□ 0.48
NUP98-203ENST00000359171 HSP90B1P14625 803 aaKnown RBP18.08■□□□□ 0.48
NUP98-203ENST00000359171 TRIM6-TRIM34B2RNG4 842 aa18.07■□□□□ 0.48
NUP98-203ENST00000359171 VSIG10Q8N0Z9 540 aa18.07■□□□□ 0.48
NUP98-203ENST00000359171 FAM161AQ3B820 660 aa18.06■□□□□ 0.48
NUP98-203ENST00000359171 CENPQQ7L2Z9 268 aaPredicted RBP18.06■□□□□ 0.48
NUP98-203ENST00000359171 KIF16BQ96L93 1317 aa18.05■□□□□ 0.48
NUP98-203ENST00000359171 PDE4AP27815 886 aa18.05■□□□□ 0.48
NUP98-203ENST00000359171 DDX49Q9Y6V7 483 aaKnown RBP18.05■□□□□ 0.48
NUP98-203ENST00000359171 SPAG9O60271 1321 aaKnown RBP18.05■□□□□ 0.48
NUP98-203ENST00000359171 SETQ01105 290 aaPredicted RBP18.04■□□□□ 0.48
NUP98-203ENST00000359171 ATP6V1DQ9Y5K8 247 aa18.04■□□□□ 0.48
NUP98-203ENST00000359171 RAB3GAP2Q9H2M9 1393 aa18.04■□□□□ 0.48
NUP98-203ENST00000359171 SAFB2Q14151 953 aaKnown RBP eCLIP18.04■□□□□ 0.48
NUP98-203ENST00000359171 FOXD4L1Q9NU39 408 aa18.04■□□□□ 0.48
NUP98-203ENST00000359171 FANCIQ9NVI1 1328 aa18.04■□□□□ 0.48
NUP98-203ENST00000359171 EIF3AQ14152 1382 aaKnown RBP18.03■□□□□ 0.48
NUP98-203ENST00000359171 CLUAP1Q96AJ1 413 aa18.03■□□□□ 0.48
NUP98-203ENST00000359171 MPHOSPH9Q99550 1183 aa18.03■□□□□ 0.48
NUP98-203ENST00000359171 BAZ1BQ9UIG0 1483 aaKnown RBP18.02■□□□□ 0.48
NUP98-203ENST00000359171 CARMIL1Q5VZK9 1371 aa18.02■□□□□ 0.48
NUP98-203ENST00000359171 CHMP4CQ96CF2 233 aa18.02■□□□□ 0.47
NUP98-203ENST00000359171 GORABQ5T7V8 394 aa18.02■□□□□ 0.47
NUP98-203ENST00000359171 LMOD3Q0VAK6 560 aa18.01■□□□□ 0.47
NUP98-203ENST00000359171 GPS2Q13227 327 aa18.01■□□□□ 0.47
NUP98-203ENST00000359171 RASSF8Q8NHQ8 419 aa18■□□□□ 0.47
NUP98-203ENST00000359171 SF3A1Q15459 793 aaKnown RBP18■□□□□ 0.47
NUP98-203ENST00000359171 NOL8Q76FK4 1167 aaKnown RBP18■□□□□ 0.47
NUP98-203ENST00000359171 FMN1Q68DA7 1419 aa17.97■□□□□ 0.47
NUP98-203ENST00000359171 GOLGA6L19H0YKK7 550 aa17.97■□□□□ 0.47
NUP98-203ENST00000359171 FOXD1Q16676 465 aa17.96■□□□□ 0.47
NUP98-203ENST00000359171 NCBP3Q53F19 620 aaKnown RBP17.96■□□□□ 0.47
NUP98-203ENST00000359171 CEP89Q96ST8 783 aa17.96■□□□□ 0.47
NUP98-203ENST00000359171 TERF2IPQ9NYB0 399 aa17.96■□□□□ 0.47
NUP98-203ENST00000359171 BECN2A8MW95 431 aa17.96■□□□□ 0.47
NUP98-203ENST00000359171 STK26Q9P289 416 aa17.96■□□□□ 0.46
NUP98-203ENST00000359171 NUP155O75694 1391 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms