RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 NUP160Q12769 1436 aa19.71■□□□□ 0.75
APP-205ENST00000358918 ARHGEF11O15085 1522 aa19.7■□□□□ 0.74
APP-205ENST00000358918 JPH4Q96JJ6 628 aa19.7■□□□□ 0.74
APP-205ENST00000358918 B4GALNT3Q6L9W6 998 aa19.69■□□□□ 0.74
APP-205ENST00000358918 PTPRKQ15262 1439 aa19.69■□□□□ 0.74
APP-205ENST00000358918 UACAQ9BZF9 1416 aa19.68■□□□□ 0.74
APP-205ENST00000358918 NUP153P49790 1475 aaKnown RBP19.67■□□□□ 0.74
APP-205ENST00000358918 NBR1Q14596 966 aa19.67■□□□□ 0.74
APP-205ENST00000358918 RAPGEF6Q8TEU7 1601 aa19.67■□□□□ 0.74
APP-205ENST00000358918 PTPN23Q9H3S7 1636 aa19.66■□□□□ 0.74
APP-205ENST00000358918 WASHC2AQ641Q2 1341 aa19.65■□□□□ 0.74
APP-205ENST00000358918 CARMIL2Q6F5E8 1435 aa19.64■□□□□ 0.73
APP-205ENST00000358918 PLB1Q6P1J6 1458 aa19.62■□□□□ 0.73
APP-205ENST00000358918 HFM1A2PYH4 1435 aa19.62■□□□□ 0.73
APP-205ENST00000358918 ZBED9Q6R2W3 1325 aa19.62■□□□□ 0.73
APP-205ENST00000358918 CNTLNQ9NXG0 1405 aa19.62■□□□□ 0.73
APP-205ENST00000358918 HSPA5P11021 654 aaKnown RBP19.62■□□□□ 0.73
APP-205ENST00000358918 KDM5BQ9UGL1 1544 aa19.61■□□□□ 0.73
APP-205ENST00000358918 PAK3O75914 559 aaPredicted RBP19.61■□□□□ 0.73
APP-205ENST00000358918 TCOF1Q13428 1488 aaKnown RBP19.58■□□□□ 0.73
APP-205ENST00000358918 CCDC184Q52MB2 194 aa19.58■□□□□ 0.72
APP-205ENST00000358918 CHIC2Q9UKJ5 165 aa19.58■□□□□ 0.72
APP-205ENST00000358918 FAM9BQ8IZU0 186 aa19.57■□□□□ 0.72
APP-205ENST00000358918 ANP32AP39687 249 aaKnown RBP19.57■□□□□ 0.72
APP-205ENST00000358918 RTL5Q5HYW3 569 aaPredicted RBP19.57■□□□□ 0.72
APP-205ENST00000358918 NAIPQ13075 1403 aa19.56■□□□□ 0.72
APP-205ENST00000358918 MIA2Q96PC5 1412 aa19.56■□□□□ 0.72
APP-205ENST00000358918 EIF4G2P78344 907 aaKnown RBP eCLIP19.56■□□□□ 0.72
APP-205ENST00000358918 MRS2Q9HD23 443 aa19.55■□□□□ 0.72
APP-205ENST00000358918 RRP7BPQ9NSQ0 103 aa19.55■□□□□ 0.72
APP-205ENST00000358918 PRG4Q92954 1404 aaPredicted RBP19.54■□□□□ 0.72
APP-205ENST00000358918 PRKRIP1Q9H875 184 aaPredicted RBP19.54■□□□□ 0.72
APP-205ENST00000358918 IPO9Q96P70 1041 aaKnown RBP19.53■□□□□ 0.72
APP-205ENST00000358918 TROQ12816 1431 aaPredicted RBP19.51■□□□□ 0.71
APP-205ENST00000358918 CHD1O14646 1710 aa19.5■□□□□ 0.71
APP-205ENST00000358918 ZBTB47Q9UFB7 747 aaPredicted RBP19.49■□□□□ 0.71
APP-205ENST00000358918 ZNF644Q9H582 1327 aaPredicted RBP19.49■□□□□ 0.71
APP-205ENST00000358918 ANO8Q9HCE9 1232 aaPredicted RBP19.47■□□□□ 0.71
APP-205ENST00000358918 CCDC7Q96M83 1385 aa19.47■□□□□ 0.71
APP-205ENST00000358918 ABCA8O94911 1581 aa19.47■□□□□ 0.71
APP-205ENST00000358918 NCOA1Q15788 1441 aa19.46■□□□□ 0.71
APP-205ENST00000358918 SMG6Q86US8 1419 aaKnown RBP19.46■□□□□ 0.71
APP-205ENST00000358918 CCDC136Q96JN2 1154 aa19.46■□□□□ 0.71
APP-205ENST00000358918 KIF14Q15058 1648 aa19.43■□□□□ 0.7
APP-205ENST00000358918 PTPRGP23470 1445 aa19.43■□□□□ 0.7
APP-205ENST00000358918 DAPK1P53355 1430 aa19.42■□□□□ 0.7
APP-205ENST00000358918 PLEKHD1A6NEE1 506 aa19.42■□□□□ 0.7
APP-205ENST00000358918 CFDP1Q9UEE9 299 aaPredicted RBP19.42■□□□□ 0.7
APP-205ENST00000358918 ATP10BO94823 1461 aa19.42■□□□□ 0.7
APP-205ENST00000358918 GCC2Q8IWJ2 1684 aa19.41■□□□□ 0.7
APP-205ENST00000358918 ABCC5O15440 1437 aa19.41■□□□□ 0.7
APP-205ENST00000358918 AKNAQ7Z591 1439 aa19.41■□□□□ 0.7
APP-205ENST00000358918 C11orf95C9JLR9 678 aaPredicted RBP19.4■□□□□ 0.7
APP-205ENST00000358918 ZNF777Q9ULD5 760 aaPredicted RBP19.4■□□□□ 0.7
APP-205ENST00000358918 GPATCH8Q9UKJ3 1502 aaKnown RBP19.4■□□□□ 0.7
APP-205ENST00000358918 KDM6BO15054 1643 aa19.4■□□□□ 0.7
APP-205ENST00000358918 NUDCQ9Y266 331 aa19.4■□□□□ 0.7
APP-205ENST00000358918 RNF123Q5XPI4 1314 aa19.39■□□□□ 0.69
APP-205ENST00000358918 DNMT1P26358 1616 aaKnown RBP19.38■□□□□ 0.69
APP-205ENST00000358918 ADCY10Q96PN6 1610 aa19.38■□□□□ 0.69
APP-205ENST00000358918 CAMSAP2Q08AD1 1489 aa19.37■□□□□ 0.69
APP-205ENST00000358918 SALL2Q9Y467 1007 aaPredicted RBP19.36■□□□□ 0.69
APP-205ENST00000358918 ITSN2Q9NZM3 1697 aa19.36■□□□□ 0.69
APP-205ENST00000358918 L3MBTL2Q969R5 705 aa19.34■□□□□ 0.69
APP-205ENST00000358918 ROCK1Q13464 1354 aa19.34■□□□□ 0.69
APP-205ENST00000358918 SHROOM2Q13796 1616 aa19.33■□□□□ 0.69
APP-205ENST00000358918 DENND4BO75064 1496 aaPredicted RBP19.33■□□□□ 0.68
APP-205ENST00000358918 IL27Q8NEV9 243 aa19.33■□□□□ 0.68
APP-205ENST00000358918 ERCC6L2Q5T890 1561 aa19.32■□□□□ 0.68
APP-205ENST00000358918 KIF7Q2M1P5 1343 aa19.32■□□□□ 0.68
APP-205ENST00000358918 ABCC10Q5T3U5 1492 aa19.3■□□□□ 0.68
APP-205ENST00000358918 MPHOSPH9Q99550 1183 aa19.3■□□□□ 0.68
APP-205ENST00000358918 USP35Q9P2H5 1018 aa19.28■□□□□ 0.68
APP-205ENST00000358918 CDC42BPAQ5VT25 1732 aa19.27■□□□□ 0.68
APP-205ENST00000358918 FOXD1Q16676 465 aa19.26■□□□□ 0.67
APP-205ENST00000358918 RTN4Q9NQC3 1192 aaKnown RBP19.25■□□□□ 0.67
APP-205ENST00000358918 NEFMP07197 916 aa19.25■□□□□ 0.67
APP-205ENST00000358918 NPM2Q86SE8 214 aaKnown RBP19.25■□□□□ 0.67
APP-205ENST00000358918 SPATA31E1Q6ZUB1 1445 aa19.24■□□□□ 0.67
APP-205ENST00000358918 NBPF8Q3BBV2 869 aa19.24■□□□□ 0.67
APP-205ENST00000358918 TCERG1O14776 1098 aaKnown RBP19.23■□□□□ 0.67
APP-205ENST00000358918 POLR1AO95602 1720 aaPredicted RBP19.22■□□□□ 0.67
APP-205ENST00000358918 CLASP1Q7Z460 1538 aa19.22■□□□□ 0.67
APP-205ENST00000358918 LAS1LQ9Y4W2 734 aaKnown RBP19.21■□□□□ 0.67
APP-205ENST00000358918 RPRD2Q5VT52 1461 aaKnown RBP19.21■□□□□ 0.67
APP-205ENST00000358918 DHX29Q7Z478 1369 aaKnown RBP19.2■□□□□ 0.66
APP-205ENST00000358918 CROCC2H7BZ55 1655 aa19.2■□□□□ 0.66
APP-205ENST00000358918 ADGBQ8N7X0 1667 aa19.2■□□□□ 0.66
APP-205ENST00000358918 PPM1GO15355 546 aaPredicted RBP19.2■□□□□ 0.66
APP-205ENST00000358918 ABCC2Q92887 1545 aa19.2■□□□□ 0.66
APP-205ENST00000358918 TEX14Q8IWB6 1497 aa19.19■□□□□ 0.66
APP-205ENST00000358918 SLC4A1APQ9BWU0 796 aaKnown RBP19.19■□□□□ 0.66
APP-205ENST00000358918 ANKRD30AQ9BXX3 1397 aa19.19■□□□□ 0.66
APP-205ENST00000358918 HNRNPMP52272 730 aaKnown RBP eCLIP19.19■□□□□ 0.661e-6■□□□□ 11.1
APP-205ENST00000358918 ADGRL2O95490 1459 aa19.18■□□□□ 0.66
APP-205ENST00000358918 WASHC2CQ9Y4E1 1318 aa19.18■□□□□ 0.66
APP-205ENST00000358918 CNGB1Q14028 1251 aaPredicted RBP19.17■□□□□ 0.66
APP-205ENST00000358918 ANKRD30BQ9BXX2 1392 aa19.17■□□□□ 0.66
APP-205ENST00000358918 PDE4AP27815 886 aa19.16■□□□□ 0.66
APP-205ENST00000358918 C9orf84Q5VXU9 1444 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms