RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 KDM6BO15054 1643 aa37.91■■■■□ 3.66
ALKAL1-201ENST00000358543 PREX2Q70Z35 1606 aa37.91■■■■□ 3.66
ALKAL1-201ENST00000358543 CDC42BPAQ5VT25 1732 aa37.91■■■■□ 3.66
ALKAL1-201ENST00000358543 AKNAQ7Z591 1439 aa37.91■■■■□ 3.66
ALKAL1-201ENST00000358543 CDC42BPBQ9Y5S2 1711 aa37.9■■■■□ 3.66
ALKAL1-201ENST00000358543 ARHGAP5Q13017 1502 aa37.9■■■■□ 3.66
ALKAL1-201ENST00000358543 COL17A1Q9UMD9 1497 aaPredicted RBP37.89■■■■□ 3.66
ALKAL1-201ENST00000358543 CFDP1Q9UEE9 299 aaPredicted RBP37.83■■■■□ 3.65
ALKAL1-201ENST00000358543 ITSN2Q9NZM3 1697 aa37.79■■■■□ 3.64
ALKAL1-201ENST00000358543 ADGRL1O94910 1474 aa37.78■■■■□ 3.64
ALKAL1-201ENST00000358543 DENND4BO75064 1496 aaPredicted RBP37.74■■■■□ 3.63
ALKAL1-201ENST00000358543 SCAPERQ9BY12 1400 aa37.74■■■■□ 3.63
ALKAL1-201ENST00000358543 ZNF777Q9ULD5 760 aaPredicted RBP37.71■■■■□ 3.63
ALKAL1-201ENST00000358543 RAPGEF3O95398 923 aa37.7■■■■□ 3.63
ALKAL1-201ENST00000358543 MYOM3Q5VTT5 1437 aa37.7■■■■□ 3.62
ALKAL1-201ENST00000358543 SAMD9LQ8IVG5 1584 aa37.67■■■■□ 3.62
ALKAL1-201ENST00000358543 PLEKHH2Q8IVE3 1493 aa37.66■■■■□ 3.62
ALKAL1-201ENST00000358543 MIA2Q96PC5 1412 aa37.66■■■■□ 3.62
ALKAL1-201ENST00000358543 KIAA1107Q9UPP5 1409 aa37.66■■■■□ 3.62
ALKAL1-201ENST00000358543 ABCC1P33527 1531 aa37.66■■■■□ 3.62
ALKAL1-201ENST00000358543 POGZQ7Z3K3 1410 aa37.63■■■■□ 3.61
ALKAL1-201ENST00000358543 RICTORQ6R327 1708 aa37.62■■■■□ 3.61
ALKAL1-201ENST00000358543 ARHGEF12Q9NZN5 1544 aa37.61■■■■□ 3.61
ALKAL1-201ENST00000358543 FRMPD1Q5SYB0 1578 aa37.61■■■■□ 3.61
ALKAL1-201ENST00000358543 ZNF644Q9H582 1327 aaPredicted RBP37.61■■■■□ 3.61
ALKAL1-201ENST00000358543 ZNF518AQ6AHZ1 1483 aa37.58■■■■□ 3.61
ALKAL1-201ENST00000358543 PPARGC1BQ86YN6 1023 aaKnown RBP37.57■■■■□ 3.6
ALKAL1-201ENST00000358543 HNRNPMP52272 730 aaKnown RBP eCLIP37.55■■■■□ 3.6
ALKAL1-201ENST00000358543 TRAPPC8Q9Y2L5 1435 aa37.54■■■■□ 3.6
ALKAL1-201ENST00000358543 CAMSAP2Q08AD1 1489 aa37.54■■■■□ 3.6
ALKAL1-201ENST00000358543 AFAP1Q8N556 730 aa37.54■■■■□ 3.6
ALKAL1-201ENST00000358543 SYCP2Q9BX26 1530 aa37.54■■■■□ 3.6
ALKAL1-201ENST00000358543 ZMYM4Q5VZL5 1548 aa37.53■■■■□ 3.6
ALKAL1-201ENST00000358543 FGD6Q6ZV73 1430 aa37.51■■■■□ 3.59
ALKAL1-201ENST00000358543 MBD5Q9P267 1494 aa37.51■■■■□ 3.59
ALKAL1-201ENST00000358543 RSPH4AQ5TD94 716 aa37.5■■■■□ 3.59
ALKAL1-201ENST00000358543 MAGI2Q86UL8 1455 aa37.5■■■■□ 3.59
ALKAL1-201ENST00000358543 KDM5CP41229 1560 aa37.5■■■■□ 3.59
ALKAL1-201ENST00000358543 TCOF1Q13428 1488 aaKnown RBP37.43■■■■□ 3.58
ALKAL1-201ENST00000358543 PTPN23Q9H3S7 1636 aa37.43■■■■□ 3.58
ALKAL1-201ENST00000358543 MLH3Q9UHC1 1453 aa37.42■■■■□ 3.58
ALKAL1-201ENST00000358543 ARHGEF5Q12774 1597 aa37.4■■■■□ 3.58
ALKAL1-201ENST00000358543 CCDC141Q6ZP82 1450 aa37.37■■■■□ 3.57
ALKAL1-201ENST00000358543 SPAG9O60271 1321 aaKnown RBP37.36■■■■□ 3.57
ALKAL1-201ENST00000358543 ZFYVE16Q7Z3T8 1539 aa37.36■■■■□ 3.57
ALKAL1-201ENST00000358543 HECW2Q9P2P5 1572 aa37.36■■■■□ 3.57
ALKAL1-201ENST00000358543 YEATS2Q9ULM3 1422 aa37.35■■■■□ 3.57
ALKAL1-201ENST00000358543 ARHGEF40Q8TER5 1519 aa37.33■■■■□ 3.57
ALKAL1-201ENST00000358543 MYT1LQ9UL68 1186 aa37.32■■■■□ 3.56
ALKAL1-201ENST00000358543 RTEL1-TNFRSF6BF6WH68 1400 aa37.29■■■■□ 3.56
ALKAL1-201ENST00000358543 TSPY4P0CV99 314 aa37.29■■■■□ 3.56
ALKAL1-201ENST00000358543 TSPY10P0CW01 314 aa37.29■■■■□ 3.56
ALKAL1-201ENST00000358543 KIDINS220Q9ULH0 1771 aa37.28■■■■□ 3.56
ALKAL1-201ENST00000358543 FAM50AQ14320 339 aaKnown RBP37.26■■■■□ 3.56
ALKAL1-201ENST00000358543 ATP10AO60312 1499 aa37.26■■■■□ 3.55
ALKAL1-201ENST00000358543 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.25■■■■□ 3.55
ALKAL1-201ENST00000358543 ATP7AQ04656 1500 aa37.25■■■■□ 3.55
ALKAL1-201ENST00000358543 INO80Q9ULG1 1556 aaPredicted RBP37.25■■■■□ 3.55
ALKAL1-201ENST00000358543 ABCC5O15440 1437 aa37.23■■■■□ 3.55
ALKAL1-201ENST00000358543 RRBP1Q9P2E9 1410 aaKnown RBP37.22■■■■□ 3.55
ALKAL1-201ENST00000358543 DIP2CQ9Y2E4 1556 aa37.21■■■■□ 3.55
ALKAL1-201ENST00000358543 DAPK1P53355 1430 aa37.2■■■■□ 3.55
ALKAL1-201ENST00000358543 DNMT1P26358 1616 aaKnown RBP37.2■■■■□ 3.55
ALKAL1-201ENST00000358543 C9orf84Q5VXU9 1444 aa37.19■■■■□ 3.54
ALKAL1-201ENST00000358543 ABCA6Q8N139 1617 aa37.19■■■■□ 3.54
ALKAL1-201ENST00000358543 MAST1Q9Y2H9 1570 aa37.18■■■■□ 3.54
ALKAL1-201ENST00000358543 SHANK2Q9UPX8 1470 aa37.17■■■■□ 3.54
ALKAL1-201ENST00000358543 REREQ9P2R6 1566 aa37.15■■■■□ 3.54
ALKAL1-201ENST00000358543 CROCC2H7BZ55 1655 aa37.12■■■■□ 3.53
ALKAL1-201ENST00000358543 ARID4BQ4LE39 1312 aaPredicted RBP37.08■■■■□ 3.53
ALKAL1-201ENST00000358543 A2MP01023 1474 aa37.06■■■■□ 3.52
ALKAL1-201ENST00000358543 ADGBQ8N7X0 1667 aa37.05■■■■□ 3.52
ALKAL1-201ENST00000358543 AGLP35573 1532 aa37.04■■■■□ 3.52
ALKAL1-201ENST00000358543 SIGLEC1Q9BZZ2 1709 aa37.03■■■■□ 3.52
ALKAL1-201ENST00000358543 DHX29Q7Z478 1369 aaKnown RBP37.03■■■■□ 3.52
ALKAL1-201ENST00000358543 PLXNC1O60486 1568 aa37.02■■■■□ 3.52
ALKAL1-201ENST00000358543 CHIC2Q9UKJ5 165 aa37■■■■□ 3.51
ALKAL1-201ENST00000358543 ANKRD30AQ9BXX3 1397 aa36.99■■■■□ 3.51
ALKAL1-201ENST00000358543 PTPRKQ15262 1439 aa36.99■■■■□ 3.51
ALKAL1-201ENST00000358543 ADGRL2O95490 1459 aa36.98■■■■□ 3.51
ALKAL1-201ENST00000358543 NCOA1Q15788 1441 aa36.97■■■■□ 3.51
ALKAL1-201ENST00000358543 KDM4FA0A1W2PPD8 638 aa36.94■■■■□ 3.5
ALKAL1-201ENST00000358543 BCORL1Q5H9F3 1711 aa36.93■■■■□ 3.5
ALKAL1-201ENST00000358543 KIF15Q9NS87 1388 aa36.93■■■■□ 3.5
ALKAL1-201ENST00000358543 RRP7BPQ9NSQ0 103 aa36.93■■■■□ 3.5
ALKAL1-201ENST00000358543 ITGAEP38570 1179 aa36.92■■■■□ 3.5
ALKAL1-201ENST00000358543 ROCK1Q13464 1354 aa36.91■■■■□ 3.5
ALKAL1-201ENST00000358543 DUOX2Q9NRD8 1548 aa36.9■■■■□ 3.5
ALKAL1-201ENST00000358543 ADAMTSL3P82987 1691 aa36.86■■■■□ 3.49
ALKAL1-201ENST00000358543 MLECQ14165 292 aa36.86■■■■□ 3.49
ALKAL1-201ENST00000358543 ERBINQ96RT1 1412 aa36.83■■■■□ 3.49
ALKAL1-201ENST00000358543 KIF3BO15066 747 aa36.82■■■■□ 3.48
ALKAL1-201ENST00000358543 PPP6R1Q9UPN7 881 aa36.79■■■■□ 3.48
ALKAL1-201ENST00000358543 EIF2AK4Q9P2K8 1649 aaKnown RBP36.78■■■■□ 3.48
ALKAL1-201ENST00000358543 GGT6Q6P531 493 aa36.76■■■■□ 3.48
ALKAL1-201ENST00000358543 MADDQ8WXG6 1647 aa36.74■■■■□ 3.47
ALKAL1-201ENST00000358543 ANKRD50Q9ULJ7 1429 aa36.73■■■■□ 3.47
ALKAL1-201ENST00000358543 FER1L4A9Z1Z3 1794 aa36.68■■■■□ 3.46
ALKAL1-201ENST00000358543 RNF17Q9BXT8 1623 aaKnown RBP36.68■■■■□ 3.46
ALKAL1-201ENST00000358543 ESF1Q9H501 851 aaKnown RBP36.68■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms