RNA–Protein interactions for RNA: ENST00000358356.9

RUNX1-203, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene RUNX1, Length 2,720 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-203ENST00000358356 EIF4G3O43432 1585 aaKnown RBP23.65■■□□□ 1.38
RUNX1-203ENST00000358356 EPRSP07814 1512 aaKnown RBP23.64■■□□□ 1.38
RUNX1-203ENST00000358356 ZNF644Q9H582 1327 aaPredicted RBP23.64■■□□□ 1.38
RUNX1-203ENST00000358356 NBPF8Q3BBV2 869 aa23.63■■□□□ 1.37
RUNX1-203ENST00000358356 TCOF1Q13428 1488 aaKnown RBP23.63■■□□□ 1.37
RUNX1-203ENST00000358356 PRKRIP1Q9H875 184 aaPredicted RBP23.59■■□□□ 1.37
RUNX1-203ENST00000358356 MRS2Q9HD23 443 aa23.59■■□□□ 1.37
RUNX1-203ENST00000358356 CNTLNQ9NXG0 1405 aa23.58■■□□□ 1.36
RUNX1-203ENST00000358356 SLC4A1APQ9BWU0 796 aaKnown RBP23.57■■□□□ 1.36
RUNX1-203ENST00000358356 GRIN2AQ12879 1464 aa23.57■■□□□ 1.36
RUNX1-203ENST00000358356 HECW1Q76N89 1606 aa23.57■■□□□ 1.36
RUNX1-203ENST00000358356 CCDC7Q96M83 1385 aa23.56■■□□□ 1.36
RUNX1-203ENST00000358356 DISP1Q96F81 1524 aa23.56■■□□□ 1.36
RUNX1-203ENST00000358356 MSH5O43196 834 aa23.55■■□□□ 1.36
RUNX1-203ENST00000358356 CDK11AQ9UQ88 783 aaPredicted RBP23.55■■□□□ 1.36
RUNX1-203ENST00000358356 GCC2Q8IWJ2 1684 aa23.53■■□□□ 1.36
RUNX1-203ENST00000358356 MIA2Q96PC5 1412 aa23.53■■□□□ 1.36
RUNX1-203ENST00000358356 POLR3GLQ9BT43 218 aa23.53■■□□□ 1.36
RUNX1-203ENST00000358356 KIAA0586Q9BVV6 1533 aa23.53■■□□□ 1.36
RUNX1-203ENST00000358356 ANKRD30BQ9BXX2 1392 aa23.52■■□□□ 1.36
RUNX1-203ENST00000358356 AKNAQ7Z591 1439 aa23.51■■□□□ 1.35
RUNX1-203ENST00000358356 ZNF326Q5BKZ1 582 aaKnown RBP23.51■■□□□ 1.35
RUNX1-203ENST00000358356 NCOA1Q15788 1441 aa23.51■■□□□ 1.35
RUNX1-203ENST00000358356 KIF7Q2M1P5 1343 aa23.5■■□□□ 1.35
RUNX1-203ENST00000358356 SENP3-EIF4A1A0A087X0R7 540 aa23.49■■□□□ 1.35
RUNX1-203ENST00000358356 DAPK1P53355 1430 aa23.49■■□□□ 1.35
RUNX1-203ENST00000358356 KIAA0556O60303 1618 aa23.48■■□□□ 1.35
RUNX1-203ENST00000358356 ABCC5O15440 1437 aa23.47■■□□□ 1.35
RUNX1-203ENST00000358356 CEP170Q5SW79 1584 aa23.47■■□□□ 1.35
RUNX1-203ENST00000358356 B4GALNT3Q6L9W6 998 aa23.46■■□□□ 1.35
RUNX1-203ENST00000358356 ZNF777Q9ULD5 760 aaPredicted RBP23.46■■□□□ 1.35
RUNX1-203ENST00000358356 JPH4Q96JJ6 628 aa23.45■■□□□ 1.34
RUNX1-203ENST00000358356 RPRD2Q5VT52 1461 aaKnown RBP23.45■■□□□ 1.34
RUNX1-203ENST00000358356 PLB1Q6P1J6 1458 aa23.45■■□□□ 1.34
RUNX1-203ENST00000358356 NUP153P49790 1475 aaKnown RBP23.44■■□□□ 1.34
RUNX1-203ENST00000358356 PPP4R2Q9NY27 417 aa23.43■■□□□ 1.34
RUNX1-203ENST00000358356 PRG4Q92954 1404 aaPredicted RBP23.41■■□□□ 1.34
RUNX1-203ENST00000358356 TEX14Q8IWB6 1497 aa23.41■■□□□ 1.34
RUNX1-203ENST00000358356 SYNJ2O15056 1496 aa23.4■■□□□ 1.34
RUNX1-203ENST00000358356 ROCK1Q13464 1354 aa23.39■■□□□ 1.34
RUNX1-203ENST00000358356 ZBED9Q6R2W3 1325 aa23.39■■□□□ 1.33
RUNX1-203ENST00000358356 BCL11AQ9H165 835 aa23.38■■□□□ 1.33
RUNX1-203ENST00000358356 CFDP1Q9UEE9 299 aaPredicted RBP23.38■■□□□ 1.33
RUNX1-203ENST00000358356 MAGI1Q96QZ7 1491 aaPredicted RBP23.37■■□□□ 1.33
RUNX1-203ENST00000358356 SPATA31E1Q6ZUB1 1445 aa23.37■■□□□ 1.33
RUNX1-203ENST00000358356 RAPGEF6Q8TEU7 1601 aa23.35■■□□□ 1.33
RUNX1-203ENST00000358356 FANCIQ9NVI1 1328 aa23.33■■□□□ 1.32
RUNX1-203ENST00000358356 PKD2Q13563 968 aa23.32■■□□□ 1.32
RUNX1-203ENST00000358356 ERICH6BQ5W0A0 696 aa23.32■■□□□ 1.32
RUNX1-203ENST00000358356 ERICH6Q7L0X2 663 aa23.31■■□□□ 1.32
RUNX1-203ENST00000358356 DNMT1P26358 1616 aaKnown RBP23.3■■□□□ 1.32
RUNX1-203ENST00000358356 PZPP20742 1482 aa23.28■■□□□ 1.32
RUNX1-203ENST00000358356 USP47Q96K76 1375 aa23.27■■□□□ 1.32
RUNX1-203ENST00000358356 NUP160Q12769 1436 aa23.26■■□□□ 1.31
RUNX1-203ENST00000358356 DHX29Q7Z478 1369 aaKnown RBP23.24■■□□□ 1.31
RUNX1-203ENST00000358356 CAMSAP2Q08AD1 1489 aa23.24■■□□□ 1.31
RUNX1-203ENST00000358356 KDM2AQ9Y2K7 1162 aa23.24■■□□□ 1.31
RUNX1-203ENST00000358356 KIF14Q15058 1648 aa23.23■■□□□ 1.31
RUNX1-203ENST00000358356 CARMIL2Q6F5E8 1435 aa23.21■■□□□ 1.31
RUNX1-203ENST00000358356 TROQ12816 1431 aaPredicted RBP23.21■■□□□ 1.31
RUNX1-203ENST00000358356 KIAA1107Q9UPP5 1409 aa23.2■■□□□ 1.3
RUNX1-203ENST00000358356 GPATCH8Q9UKJ3 1502 aaKnown RBP23.19■■□□□ 1.3
RUNX1-203ENST00000358356 CARD11Q9BXL7 1154 aa23.18■■□□□ 1.3
RUNX1-203ENST00000358356 TMC1Q8TDI8 760 aa23.17■■□□□ 1.3
RUNX1-203ENST00000358356 NUDCQ9Y266 331 aa23.16■■□□□ 1.3
RUNX1-203ENST00000358356 PLEKHD1A6NEE1 506 aa23.16■■□□□ 1.3
RUNX1-203ENST00000358356 NUP155O75694 1391 aa23.15■■□□□ 1.3
RUNX1-203ENST00000358356 BCORL1Q5H9F3 1711 aa23.15■■□□□ 1.3
RUNX1-203ENST00000358356 ANKRD30AQ9BXX3 1397 aa23.15■■□□□ 1.3
RUNX1-203ENST00000358356 ANKRD50Q9ULJ7 1429 aa23.13■■□□□ 1.29
RUNX1-203ENST00000358356 MBD5Q9P267 1494 aa23.13■■□□□ 1.29
RUNX1-203ENST00000358356 SMG6Q86US8 1419 aaKnown RBP23.13■■□□□ 1.29
RUNX1-203ENST00000358356 ST20-MTHFSA0A0A6YYL1 179 aa23.12■■□□□ 1.29
RUNX1-203ENST00000358356 ATP10BO94823 1461 aa23.12■■□□□ 1.29
RUNX1-203ENST00000358356 PNISRQ8TF01 805 aaKnown RBP23.12■■□□□ 1.29
RUNX1-203ENST00000358356 CCDC136Q96JN2 1154 aa23.12■■□□□ 1.29
RUNX1-203ENST00000358356 DCAF11Q8TEB1 546 aa23.1■■□□□ 1.29
RUNX1-203ENST00000358356 SALL2Q9Y467 1007 aaPredicted RBP23.1■■□□□ 1.29
RUNX1-203ENST00000358356 HNRNPMP52272 730 aaKnown RBP eCLIP23.08■■□□□ 1.28
RUNX1-203ENST00000358356 PTPRGP23470 1445 aa23.07■■□□□ 1.28
RUNX1-203ENST00000358356 TSPY4P0CV99 314 aa23.05■■□□□ 1.28
RUNX1-203ENST00000358356 TSPY10P0CW01 314 aa23.05■■□□□ 1.28
RUNX1-203ENST00000358356 CHD1O14646 1710 aa23.05■■□□□ 1.28
RUNX1-203ENST00000358356 POLR1AO95602 1720 aaPredicted RBP23.04■■□□□ 1.28
RUNX1-203ENST00000358356 ABCA8O94911 1581 aa23.04■■□□□ 1.28
RUNX1-203ENST00000358356 ADGRL2O95490 1459 aa23.03■■□□□ 1.28
RUNX1-203ENST00000358356 KDM5CP41229 1560 aa23.03■■□□□ 1.28
RUNX1-203ENST00000358356 ERCC6L2Q5T890 1561 aa23.03■■□□□ 1.28
RUNX1-203ENST00000358356 C9orf84Q5VXU9 1444 aa23.01■■□□□ 1.27
RUNX1-203ENST00000358356 ARID4BQ4LE39 1312 aaPredicted RBP23.01■■□□□ 1.27
RUNX1-203ENST00000358356 PAK3O75914 559 aaPredicted RBP23.01■■□□□ 1.27
RUNX1-203ENST00000358356 RNF123Q5XPI4 1314 aa23■■□□□ 1.27
RUNX1-203ENST00000358356 RGL3Q3MIN7 710 aa23■■□□□ 1.27
RUNX1-203ENST00000358356 ADGBQ8N7X0 1667 aa22.99■■□□□ 1.27
RUNX1-203ENST00000358356 ITSN2Q9NZM3 1697 aa22.99■■□□□ 1.27
RUNX1-203ENST00000358356 KIF15Q9NS87 1388 aa22.98■■□□□ 1.27
RUNX1-203ENST00000358356 NBR1Q14596 966 aa22.98■■□□□ 1.27
RUNX1-203ENST00000358356 CDC42BPAQ5VT25 1732 aa22.97■■□□□ 1.27
RUNX1-203ENST00000358356 NOP58Q9Y2X3 529 aaKnown RBP22.97■■□□□ 1.27
RUNX1-203ENST00000358356 ROCK2O75116 1388 aaKnown RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms