RNA–Protein interactions for RNA: ENST00000358309.3

CX3CR1-201, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

TSL 2 BASIC

Gene CX3CR1, Length 3,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-201ENST00000358309 FGD6Q6ZV73 1430 aa8.78□□□□□ -1
CX3CR1-201ENST00000358309 TARBP1Q13395 1621 aaKnown RBP8.78□□□□□ -1
CX3CR1-201ENST00000358309 SOX12O15370 315 aa8.78□□□□□ -1
CX3CR1-201ENST00000358309 STAG3Q9UJ98 1225 aa8.78□□□□□ -1
CX3CR1-201ENST00000358309 NBPF8Q3BBV2 869 aa8.77□□□□□ -1
CX3CR1-201ENST00000358309 ERCC6L2Q5T890 1561 aa8.77□□□□□ -1
CX3CR1-201ENST00000358309 THOC2Q8NI27 1593 aaKnown RBP8.76□□□□□ -1.01
CX3CR1-201ENST00000358309 NBPF1Q3BBV0 1214 aa8.76□□□□□ -1.01
CX3CR1-201ENST00000358309 C11orf95C9JLR9 678 aaPredicted RBP8.76□□□□□ -1.01
CX3CR1-201ENST00000358309 CENPBP07199 599 aaPredicted RBP8.76□□□□□ -1.01
CX3CR1-201ENST00000358309 CC2D1BQ5T0F9 858 aaKnown RBP8.76□□□□□ -1.01
CX3CR1-201ENST00000358309 CTTNBP2Q8WZ74 1663 aa8.76□□□□□ -1.01
CX3CR1-201ENST00000358309 CCDC184Q52MB2 194 aa8.75□□□□□ -1.01
CX3CR1-201ENST00000358309 CARD11Q9BXL7 1154 aa8.75□□□□□ -1.01
CX3CR1-201ENST00000358309 CASKIN1Q8WXD9 1431 aa8.75□□□□□ -1.01
CX3CR1-201ENST00000358309 PPP1R15AO75807 674 aaPredicted RBP8.75□□□□□ -1.01
CX3CR1-201ENST00000358309 WDR62O43379 1518 aa8.75□□□□□ -1.01
CX3CR1-201ENST00000358309 PBRM1Q86U86 1689 aa8.74□□□□□ -1.01
CX3CR1-201ENST00000358309 TMEM132EQ6IEE7 984 aa8.74□□□□□ -1.01
CX3CR1-201ENST00000358309 EIF4G3O43432 1585 aaKnown RBP8.74□□□□□ -1.01
CX3CR1-201ENST00000358309 HNRNPUQ00839 825 aaKnown RBP eCLIP8.74□□□□□ -1.01
CX3CR1-201ENST00000358309 EPRSP07814 1512 aaKnown RBP8.74□□□□□ -1.01
CX3CR1-201ENST00000358309 ANP32CO43423 234 aa8.73□□□□□ -1.01
CX3CR1-201ENST00000358309 TMC1Q8TDI8 760 aa8.73□□□□□ -1.01
CX3CR1-201ENST00000358309 MAGI3Q5TCQ9 1506 aa8.73□□□□□ -1.01
CX3CR1-201ENST00000358309 TIAM1Q13009 1591 aa8.72□□□□□ -1.01
CX3CR1-201ENST00000358309 CEBPAP49715 358 aaPredicted RBP8.72□□□□□ -1.01
CX3CR1-201ENST00000358309 EFCAB2Q5VUJ9 269 aa8.72□□□□□ -1.01
CX3CR1-201ENST00000358309 SPAG9O60271 1321 aaKnown RBP8.72□□□□□ -1.01
CX3CR1-201ENST00000358309 MYOM3Q5VTT5 1437 aa8.72□□□□□ -1.01
CX3CR1-201ENST00000358309 CCDC18Q5T9S5 1454 aa8.71□□□□□ -1.01
CX3CR1-201ENST00000358309 SRCAPQ6ZRS2 3230 aa8.71□□□□□ -1.01
CX3CR1-201ENST00000358309 ACIN1Q9UKV3 1341 aaKnown RBP8.71□□□□□ -1.02
CX3CR1-201ENST00000358309 SYNJ2O15056 1496 aa8.71□□□□□ -1.02
CX3CR1-201ENST00000358309 IQGAP2Q13576 1575 aa8.71□□□□□ -1.02
CX3CR1-201ENST00000358309 ST20-MTHFSA0A0A6YYL1 179 aa8.71□□□□□ -1.02
CX3CR1-201ENST00000358309 KIAA0586Q9BVV6 1533 aa8.7□□□□□ -1.02
CX3CR1-201ENST00000358309 SCAPERQ9BY12 1400 aa8.7□□□□□ -1.02
CX3CR1-201ENST00000358309 EIF4G2P78344 907 aaKnown RBP eCLIP8.7□□□□□ -1.02
CX3CR1-201ENST00000358309 NUP153P49790 1475 aaKnown RBP8.7□□□□□ -1.02
CX3CR1-201ENST00000358309 FBXO31Q5XUX0 539 aaPredicted RBP8.69□□□□□ -1.02
CX3CR1-201ENST00000358309 TRAK1Q9UPV9 953 aa8.69□□□□□ -1.02
CX3CR1-201ENST00000358309 DISP1Q96F81 1524 aa8.69□□□□□ -1.02
CX3CR1-201ENST00000358309 ZBTB7CA1YPR0 619 aa8.69□□□□□ -1.02
CX3CR1-201ENST00000358309 PPM1GO15355 546 aaPredicted RBP8.69□□□□□ -1.02
CX3CR1-201ENST00000358309 NEUROD2Q15784 382 aa8.69□□□□□ -1.02
CX3CR1-201ENST00000358309 ESF1Q9H501 851 aaKnown RBP8.69□□□□□ -1.02
CX3CR1-201ENST00000358309 MRS2Q9HD23 443 aa8.68□□□□□ -1.02
CX3CR1-201ENST00000358309 KIF15Q9NS87 1388 aa8.68□□□□□ -1.02
CX3CR1-201ENST00000358309 ATP10BO94823 1461 aa8.67□□□□□ -1.02
CX3CR1-201ENST00000358309 RRBP1Q9P2E9 1410 aaKnown RBP8.67□□□□□ -1.02
CX3CR1-201ENST00000358309 CEP170Q5SW79 1584 aa8.67□□□□□ -1.02
CX3CR1-201ENST00000358309 WASHC2CQ9Y4E1 1318 aa8.66□□□□□ -1.02
CX3CR1-201ENST00000358309 FKBP8Q14318 412 aa8.66□□□□□ -1.02
CX3CR1-201ENST00000358309 ADAMTS12P58397 1594 aa8.66□□□□□ -1.02
CX3CR1-201ENST00000358309 NAIPQ13075 1403 aa8.66□□□□□ -1.02
CX3CR1-201ENST00000358309 EFCAB5A4FU69 1503 aa8.65□□□□□ -1.02
CX3CR1-201ENST00000358309 FBLN1P23142 703 aa8.65□□□□□ -1.02
CX3CR1-201ENST00000358309 SAMD9Q5K651 1589 aa8.65□□□□□ -1.03
CX3CR1-201ENST00000358309 ERICH6Q7L0X2 663 aa8.65□□□□□ -1.03
CX3CR1-201ENST00000358309 CFAP43Q8NDM7 1665 aa8.64□□□□□ -1.03
CX3CR1-201ENST00000358309 FYCO1Q9BQS8 1478 aa8.64□□□□□ -1.03
CX3CR1-201ENST00000358309 CFAP70Q5T0N1 1121 aa8.64□□□□□ -1.03
CX3CR1-201ENST00000358309 ABCC5O15440 1437 aa8.64□□□□□ -1.03
CX3CR1-201ENST00000358309 ARHGAP5Q13017 1502 aa8.63□□□□□ -1.03
CX3CR1-201ENST00000358309 MAP3K1Q13233 1512 aa8.63□□□□□ -1.03
CX3CR1-201ENST00000358309 UACAQ9BZF9 1416 aa8.63□□□□□ -1.03
CX3CR1-201ENST00000358309 ANKRD30AQ9BXX3 1397 aa8.62□□□□□ -1.03
CX3CR1-201ENST00000358309 WASHC2AQ641Q2 1341 aa8.62□□□□□ -1.03
CX3CR1-201ENST00000358309 ANKRD50Q9ULJ7 1429 aa8.62□□□□□ -1.03
CX3CR1-201ENST00000358309 TROQ12816 1431 aaPredicted RBP8.62□□□□□ -1.03
CX3CR1-201ENST00000358309 KDM6BO15054 1643 aa8.61□□□□□ -1.03
CX3CR1-201ENST00000358309 C14orf37Q86TY3 774 aa8.61□□□□□ -1.03
CX3CR1-201ENST00000358309 DAPK1P53355 1430 aa8.6□□□□□ -1.03
CX3CR1-201ENST00000358309 KIF14Q15058 1648 aa8.6□□□□□ -1.03
CX3CR1-201ENST00000358309 TRAPPC8Q9Y2L5 1435 aa8.6□□□□□ -1.03
CX3CR1-201ENST00000358309 SUPT16HQ9Y5B9 1047 aaKnown RBP8.6□□□□□ -1.03
CX3CR1-201ENST00000358309 LMOD2Q6P5Q4 547 aa8.59□□□□□ -1.03
CX3CR1-201ENST00000358309 GOLGB1Q14789 3259 aaKnown RBP8.59□□□□□ -1.03
CX3CR1-201ENST00000358309 GPATCH8Q9UKJ3 1502 aaKnown RBP8.59□□□□□ -1.03
CX3CR1-201ENST00000358309 PLEKHH2Q8IVE3 1493 aa8.59□□□□□ -1.03
CX3CR1-201ENST00000358309 MAGI1Q96QZ7 1491 aaPredicted RBP8.59□□□□□ -1.03
CX3CR1-201ENST00000358309 CCDC146Q8IYE0 955 aa8.59□□□□□ -1.04
CX3CR1-201ENST00000358309 C9orf84Q5VXU9 1444 aa8.58□□□□□ -1.04
CX3CR1-201ENST00000358309 MINK1Q8N4C8 1332 aaPredicted RBP8.58□□□□□ -1.04
CX3CR1-201ENST00000358309 LRRIQ1Q96JM4 1722 aa8.58□□□□□ -1.04
CX3CR1-201ENST00000358309 SLC26A8Q96RN1 970 aa8.58□□□□□ -1.04
CX3CR1-201ENST00000358309 ROCK2O75116 1388 aaKnown RBP8.58□□□□□ -1.04
CX3CR1-201ENST00000358309 CFAP65Q6ZU64 1925 aaKnown RBP8.58□□□□□ -1.04
CX3CR1-201ENST00000358309 NUTM2GQ5VZR2 741 aa8.57□□□□□ -1.04
CX3CR1-201ENST00000358309 ZNF428Q96B54 188 aa8.57□□□□□ -1.04
CX3CR1-201ENST00000358309 CAMSAP2Q08AD1 1489 aa8.57□□□□□ -1.04
CX3CR1-201ENST00000358309 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.57□□□□□ -1.04
CX3CR1-201ENST00000358309 MAPKBP1O60336 1514 aa8.56□□□□□ -1.04
CX3CR1-201ENST00000358309 DAXXQ9UER7 740 aaPredicted RBP8.56□□□□□ -1.04
CX3CR1-201ENST00000358309 NCKAP5LQ9HCH0 1330 aa8.56□□□□□ -1.04
CX3CR1-201ENST00000358309 RRP7AQ9Y3A4 280 aaKnown RBP8.56□□□□□ -1.04
CX3CR1-201ENST00000358309 KIF7Q2M1P5 1343 aa8.55□□□□□ -1.04
CX3CR1-201ENST00000358309 KIAA0556O60303 1618 aa8.55□□□□□ -1.04
CX3CR1-201ENST00000358309 SRPK2P78362 688 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms