RNA–Protein interactions for RNA: ENST00000357895.9

NEDD4L-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEDD4L, Length 3,543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-203ENST00000357895 NEFMP07197 916 aa12.67□□□□□ -0.38
NEDD4L-203ENST00000357895 SMG6Q86US8 1419 aaKnown RBP12.67□□□□□ -0.38
NEDD4L-203ENST00000357895 SUPT6HQ7KZ85 1726 aaKnown RBP12.66□□□□□ -0.38
NEDD4L-203ENST00000357895 ABCA10Q8WWZ4 1543 aa12.66□□□□□ -0.38
NEDD4L-203ENST00000357895 EHBP1L1Q8N3D4 1523 aa12.66□□□□□ -0.38
NEDD4L-203ENST00000357895 DAXXQ9UER7 740 aaPredicted RBP12.66□□□□□ -0.38
NEDD4L-203ENST00000357895 KDM5BQ9UGL1 1544 aa12.66□□□□□ -0.38
NEDD4L-203ENST00000357895 TOPBP1Q92547 1522 aa12.65□□□□□ -0.38
NEDD4L-203ENST00000357895 ZNF644Q9H582 1327 aaPredicted RBP12.65□□□□□ -0.38
NEDD4L-203ENST00000357895 EXOC6Q8TAG9 804 aa12.65□□□□□ -0.39
NEDD4L-203ENST00000357895 CARD11Q9BXL7 1154 aa12.65□□□□□ -0.39
NEDD4L-203ENST00000357895 USP47Q96K76 1375 aa12.63□□□□□ -0.39
NEDD4L-203ENST00000357895 ANKRD30BQ9BXX2 1392 aa12.62□□□□□ -0.39
NEDD4L-203ENST00000357895 PKD2Q13563 968 aa12.62□□□□□ -0.39
NEDD4L-203ENST00000357895 RCAN3Q9UKA8 241 aa12.62□□□□□ -0.39
NEDD4L-203ENST00000357895 DNMBPQ6XZF7 1577 aa12.61□□□□□ -0.39
NEDD4L-203ENST00000357895 GRIN2BQ13224 1484 aa12.61□□□□□ -0.39
NEDD4L-203ENST00000357895 NESP48681 1621 aa12.61□□□□□ -0.39
NEDD4L-203ENST00000357895 PNISRQ8TF01 805 aaKnown RBP12.61□□□□□ -0.39
NEDD4L-203ENST00000357895 PDE4AP27815 886 aa12.6□□□□□ -0.39
NEDD4L-203ENST00000357895 RRP1P56182 461 aaKnown RBP12.6□□□□□ -0.39
NEDD4L-203ENST00000357895 CUL7Q14999 1698 aa12.6□□□□□ -0.39
NEDD4L-203ENST00000357895 UGGT2Q9NYU1 1516 aa12.6□□□□□ -0.39
NEDD4L-203ENST00000357895 TCERG1O14776 1098 aaKnown RBP12.6□□□□□ -0.39
NEDD4L-203ENST00000357895 CFDP1Q9UEE9 299 aaPredicted RBP12.6□□□□□ -0.39
NEDD4L-203ENST00000357895 GAPVD1Q14C86 1478 aa12.6□□□□□ -0.39
NEDD4L-203ENST00000357895 IL27Q8NEV9 243 aa12.59□□□□□ -0.39
NEDD4L-203ENST00000357895 CTTNBP2Q8WZ74 1663 aa12.59□□□□□ -0.39
NEDD4L-203ENST00000357895 ANO8Q9HCE9 1232 aaPredicted RBP12.59□□□□□ -0.39
NEDD4L-203ENST00000357895 RPRD2Q5VT52 1461 aaKnown RBP12.59□□□□□ -0.39
NEDD4L-203ENST00000357895 CC2D2AQ9P2K1 1620 aa12.59□□□□□ -0.39
NEDD4L-203ENST00000357895 DENND4BO75064 1496 aaPredicted RBP12.58□□□□□ -0.39
NEDD4L-203ENST00000357895 PRDM2Q13029 1718 aa12.58□□□□□ -0.39
NEDD4L-203ENST00000357895 KDM6BO15054 1643 aa12.58□□□□□ -0.4
NEDD4L-203ENST00000357895 CDK13Q14004 1512 aaKnown RBP12.57□□□□□ -0.4
NEDD4L-203ENST00000357895 HECW1Q76N89 1606 aa12.56□□□□□ -0.4
NEDD4L-203ENST00000357895 ST20-MTHFSA0A0A6YYL1 179 aa12.56□□□□□ -0.4
NEDD4L-203ENST00000357895 PPM1GO15355 546 aaPredicted RBP12.56□□□□□ -0.4
NEDD4L-203ENST00000357895 PLIN1O60240 522 aa12.56□□□□□ -0.4
NEDD4L-203ENST00000357895 MIA2Q96PC5 1412 aa12.56□□□□□ -0.4
NEDD4L-203ENST00000357895 MAGI3Q5TCQ9 1506 aa12.55□□□□□ -0.4
NEDD4L-203ENST00000357895 DCAF11Q8TEB1 546 aa12.55□□□□□ -0.4
NEDD4L-203ENST00000357895 DHX29Q7Z478 1369 aaKnown RBP12.55□□□□□ -0.4
NEDD4L-203ENST00000357895 EPRSP07814 1512 aaKnown RBP12.54□□□□□ -0.4
NEDD4L-203ENST00000357895 KIF15Q9NS87 1388 aa12.54□□□□□ -0.4
NEDD4L-203ENST00000357895 DAPK1P53355 1430 aa12.54□□□□□ -0.4
NEDD4L-203ENST00000357895 MYBBP1AQ9BQG0 1328 aaKnown RBP12.54□□□□□ -0.4
NEDD4L-203ENST00000357895 RNF123Q5XPI4 1314 aa12.54□□□□□ -0.4
NEDD4L-203ENST00000357895 TCOF1Q13428 1488 aaKnown RBP12.53□□□□□ -0.4
NEDD4L-203ENST00000357895 RALBP1Q15311 655 aa12.53□□□□□ -0.4
NEDD4L-203ENST00000357895 CC2D1BQ5T0F9 858 aaKnown RBP12.53□□□□□ -0.4
NEDD4L-203ENST00000357895 SPATA31E1Q6ZUB1 1445 aa12.53□□□□□ -0.4
NEDD4L-203ENST00000357895 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.53□□□□□ -0.4
NEDD4L-203ENST00000357895 ROCK2O75116 1388 aaKnown RBP12.52□□□□□ -0.4
NEDD4L-203ENST00000357895 SKAP1Q86WV1 359 aa12.52□□□□□ -0.4
NEDD4L-203ENST00000357895 TEX14Q8IWB6 1497 aa12.52□□□□□ -0.4
NEDD4L-203ENST00000357895 CDCA7LQ96GN5 454 aa12.52□□□□□ -0.41
NEDD4L-203ENST00000357895 DDRGK1Q96HY6 314 aa12.52□□□□□ -0.41
NEDD4L-203ENST00000357895 RGL3Q3MIN7 710 aa12.51□□□□□ -0.41
NEDD4L-203ENST00000357895 THOC2Q8NI27 1593 aaKnown RBP12.51□□□□□ -0.41
NEDD4L-203ENST00000357895 ABCC5O15440 1437 aa12.51□□□□□ -0.41
NEDD4L-203ENST00000357895 SLC4A3P48751 1232 aa12.51□□□□□ -0.41
NEDD4L-203ENST00000357895 BACH2Q9BYV9 841 aa12.51□□□□□ -0.41
NEDD4L-203ENST00000357895 GCC2Q8IWJ2 1684 aa12.5□□□□□ -0.41
NEDD4L-203ENST00000357895 PRKCSHP14314 528 aaPredicted RBP12.5□□□□□ -0.41
NEDD4L-203ENST00000357895 NLRP13Q86W25 1043 aa12.5□□□□□ -0.41
NEDD4L-203ENST00000357895 SAMD9Q5K651 1589 aa12.5□□□□□ -0.41
NEDD4L-203ENST00000357895 NUP155O75694 1391 aa12.5□□□□□ -0.41
NEDD4L-203ENST00000357895 ROCK1Q13464 1354 aa12.49□□□□□ -0.41
NEDD4L-203ENST00000357895 USP35Q9P2H5 1018 aa12.49□□□□□ -0.41
NEDD4L-203ENST00000357895 CRBNQ96SW2 442 aa12.49□□□□□ -0.41
NEDD4L-203ENST00000357895 ARID4BQ4LE39 1312 aaPredicted RBP12.49□□□□□ -0.41
NEDD4L-203ENST00000357895 BRD4O60885 1362 aaPredicted RBP12.48□□□□□ -0.41
NEDD4L-203ENST00000357895 KTN1Q86UP2 1357 aaKnown RBP12.48□□□□□ -0.41
NEDD4L-203ENST00000357895 EIF5BO60841 1220 aaKnown RBP12.48□□□□□ -0.41
NEDD4L-203ENST00000357895 MS4A1P11836 297 aa12.48□□□□□ -0.41
NEDD4L-203ENST00000357895 LRRIQ1Q96JM4 1722 aa12.48□□□□□ -0.41
NEDD4L-203ENST00000357895 TSPY4P0CV99 314 aa12.48□□□□□ -0.41
NEDD4L-203ENST00000357895 TSPY10P0CW01 314 aa12.48□□□□□ -0.41
NEDD4L-203ENST00000357895 FBLN2P98095 1184 aa12.48□□□□□ -0.41
NEDD4L-203ENST00000357895 PDE3BQ13370 1112 aa12.47□□□□□ -0.41
NEDD4L-203ENST00000357895 URB2Q14146 1524 aaKnown RBP12.47□□□□□ -0.41
NEDD4L-203ENST00000357895 KIAA1107Q9UPP5 1409 aa12.47□□□□□ -0.41
NEDD4L-203ENST00000357895 ARHGEF11O15085 1522 aa12.46□□□□□ -0.41
NEDD4L-203ENST00000357895 RGS3P49796 1198 aa12.45□□□□□ -0.42
NEDD4L-203ENST00000357895 ANKRD30AQ9BXX3 1397 aa12.45□□□□□ -0.42
NEDD4L-203ENST00000357895 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.45□□□□□ -0.428e-7■■■□□ 14.8
NEDD4L-203ENST00000357895 BRPF3Q9ULD4 1205 aa12.43□□□□□ -0.42
NEDD4L-203ENST00000357895 PDS5BQ9NTI5 1447 aa12.43□□□□□ -0.42
NEDD4L-203ENST00000357895 GSE1Q14687 1217 aa12.42□□□□□ -0.42
NEDD4L-203ENST00000357895 WDR43Q15061 677 aaKnown RBP eCLIP12.42□□□□□ -0.42
NEDD4L-203ENST00000357895 NFKBIBQ15653 356 aa12.41□□□□□ -0.42
NEDD4L-203ENST00000357895 PZPP20742 1482 aa12.41□□□□□ -0.42
NEDD4L-203ENST00000357895 PRG4Q92954 1404 aaPredicted RBP12.41□□□□□ -0.42
NEDD4L-203ENST00000357895 ANKRD50Q9ULJ7 1429 aa12.41□□□□□ -0.42
NEDD4L-203ENST00000357895 IQGAP2Q13576 1575 aa12.4□□□□□ -0.42
NEDD4L-203ENST00000357895 LAMC3Q9Y6N6 1575 aa12.4□□□□□ -0.42
NEDD4L-203ENST00000357895 LRPPRCP42704 1394 aaKnown RBP12.4□□□□□ -0.42
NEDD4L-203ENST00000357895 PLEKHD1A6NEE1 506 aa12.4□□□□□ -0.42
NEDD4L-203ENST00000357895 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms