RNA–Protein interactions for RNA: ENST00000354679.3

HCFC1R1-202, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2 BASIC

Gene HCFC1R1, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-202ENST00000354679 MTUS2Q5JR59 1369 aa32.24■■■□□ 2.75
HCFC1R1-202ENST00000354679 PREX2Q70Z35 1606 aa32.24■■■□□ 2.75
HCFC1R1-202ENST00000354679 CDC42BPBQ9Y5S2 1711 aa32.23■■■□□ 2.75
HCFC1R1-202ENST00000354679 POGZQ7Z3K3 1410 aa32.23■■■□□ 2.75
HCFC1R1-202ENST00000354679 VPS8Q8N3P4 1428 aa32.23■■■□□ 2.75
HCFC1R1-202ENST00000354679 ZMYM4Q5VZL5 1548 aa32.21■■■□□ 2.75
HCFC1R1-202ENST00000354679 ARHGEF40Q8TER5 1519 aa32.19■■■□□ 2.74
HCFC1R1-202ENST00000354679 CDC42BPAQ5VT25 1732 aa32.18■■■□□ 2.74
HCFC1R1-202ENST00000354679 EHBP1L1Q8N3D4 1523 aa32.17■■■□□ 2.74
HCFC1R1-202ENST00000354679 MAGI2Q86UL8 1455 aa32.14■■■□□ 2.74
HCFC1R1-202ENST00000354679 ZFYVE16Q7Z3T8 1539 aa32.13■■■□□ 2.73
HCFC1R1-202ENST00000354679 GPATCH8Q9UKJ3 1502 aaKnown RBP32.13■■■□□ 2.73
HCFC1R1-202ENST00000354679 ZNF518AQ6AHZ1 1483 aa32.11■■■□□ 2.73
HCFC1R1-202ENST00000354679 YEATS2Q9ULM3 1422 aa32.1■■■□□ 2.73
HCFC1R1-202ENST00000354679 CCNB3Q8WWL7 1395 aa32.1■■■□□ 2.73
HCFC1R1-202ENST00000354679 ABCC1P33527 1531 aa32.1■■■□□ 2.73
HCFC1R1-202ENST00000354679 TIAM1Q13009 1591 aa32.09■■■□□ 2.73
HCFC1R1-202ENST00000354679 ARHGEF12Q9NZN5 1544 aa32.05■■■□□ 2.72
HCFC1R1-202ENST00000354679 AFAP1Q8N556 730 aa32.05■■■□□ 2.72
HCFC1R1-202ENST00000354679 ZNF777Q9ULD5 760 aaPredicted RBP32.05■■■□□ 2.72
HCFC1R1-202ENST00000354679 KDM5CP41229 1560 aa32.05■■■□□ 2.72
HCFC1R1-202ENST00000354679 ARID4BQ4LE39 1312 aaPredicted RBP32.04■■■□□ 2.72
HCFC1R1-202ENST00000354679 ITSN2Q9NZM3 1697 aa32.04■■■□□ 2.72
HCFC1R1-202ENST00000354679 SAMD9LQ8IVG5 1584 aa32.02■■■□□ 2.72
HCFC1R1-202ENST00000354679 CFDP1Q9UEE9 299 aaPredicted RBP32.02■■■□□ 2.72
HCFC1R1-202ENST00000354679 TRAPPC8Q9Y2L5 1435 aa32.01■■■□□ 2.72
HCFC1R1-202ENST00000354679 SUPT6HQ7KZ85 1726 aaKnown RBP31.98■■■□□ 2.71
HCFC1R1-202ENST00000354679 HECW2Q9P2P5 1572 aa31.98■■■□□ 2.71
HCFC1R1-202ENST00000354679 BCORL1Q5H9F3 1711 aa31.97■■■□□ 2.71
HCFC1R1-202ENST00000354679 ATP10AO60312 1499 aa31.97■■■□□ 2.71
HCFC1R1-202ENST00000354679 NCOA2Q15596 1464 aa31.97■■■□□ 2.71
HCFC1R1-202ENST00000354679 MAP3K1Q13233 1512 aa31.96■■■□□ 2.71
HCFC1R1-202ENST00000354679 ADAMTSL3P82987 1691 aa31.96■■■□□ 2.71
HCFC1R1-202ENST00000354679 LRRC9Q6ZRR7 1453 aa31.96■■■□□ 2.71
HCFC1R1-202ENST00000354679 SYCP2Q9BX26 1530 aa31.95■■■□□ 2.71
HCFC1R1-202ENST00000354679 MYT1LQ9UL68 1186 aa31.95■■■□□ 2.71
HCFC1R1-202ENST00000354679 PLEKHH2Q8IVE3 1493 aa31.95■■■□□ 2.7
HCFC1R1-202ENST00000354679 MLH3Q9UHC1 1453 aa31.94■■■□□ 2.7
HCFC1R1-202ENST00000354679 C9orf84Q5VXU9 1444 aa31.93■■■□□ 2.7
HCFC1R1-202ENST00000354679 SIGLEC1Q9BZZ2 1709 aa31.93■■■□□ 2.7
HCFC1R1-202ENST00000354679 KIAA1107Q9UPP5 1409 aa31.92■■■□□ 2.7
HCFC1R1-202ENST00000354679 HNRNPMP52272 730 aaKnown RBP eCLIP31.9■■■□□ 2.7
HCFC1R1-202ENST00000354679 DIP2CQ9Y2E4 1556 aa31.89■■■□□ 2.7
HCFC1R1-202ENST00000354679 KANK4Q5T7N3 995 aaPredicted RBP31.87■■■□□ 2.69
HCFC1R1-202ENST00000354679 ABCA6Q8N139 1617 aa31.86■■■□□ 2.69
HCFC1R1-202ENST00000354679 MADDQ8WXG6 1647 aa31.86■■■□□ 2.69
HCFC1R1-202ENST00000354679 ZNF644Q9H582 1327 aaPredicted RBP31.85■■■□□ 2.69
HCFC1R1-202ENST00000354679 APLP2Q06481 763 aa31.83■■■□□ 2.69
HCFC1R1-202ENST00000354679 KIDINS220Q9ULH0 1771 aa31.83■■■□□ 2.69
HCFC1R1-202ENST00000354679 PTPRMP28827 1452 aa31.83■■■□□ 2.69
HCFC1R1-202ENST00000354679 SPAG9O60271 1321 aaKnown RBP31.81■■■□□ 2.68
HCFC1R1-202ENST00000354679 REREQ9P2R6 1566 aa31.81■■■□□ 2.68
HCFC1R1-202ENST00000354679 MLECQ14165 292 aa31.8■■■□□ 2.68
HCFC1R1-202ENST00000354679 MBD5Q9P267 1494 aa31.77■■■□□ 2.68
HCFC1R1-202ENST00000354679 CAMSAP2Q08AD1 1489 aa31.76■■■□□ 2.67
HCFC1R1-202ENST00000354679 RIMS1Q86UR5 1692 aaKnown RBP31.76■■■□□ 2.67
HCFC1R1-202ENST00000354679 ATP7AQ04656 1500 aa31.75■■■□□ 2.67
HCFC1R1-202ENST00000354679 INO80Q9ULG1 1556 aaPredicted RBP31.73■■■□□ 2.67
HCFC1R1-202ENST00000354679 AGLP35573 1532 aa31.7■■■□□ 2.67
HCFC1R1-202ENST00000354679 FER1L4A9Z1Z3 1794 aa31.7■■■□□ 2.67
HCFC1R1-202ENST00000354679 MYOM3Q5VTT5 1437 aa31.68■■■□□ 2.66
HCFC1R1-202ENST00000354679 CCDC141Q6ZP82 1450 aa31.67■■■□□ 2.66
HCFC1R1-202ENST00000354679 RSPH4AQ5TD94 716 aa31.64■■■□□ 2.66
HCFC1R1-202ENST00000354679 MIA2Q96PC5 1412 aa31.64■■■□□ 2.66
HCFC1R1-202ENST00000354679 RTEL1-TNFRSF6BF6WH68 1400 aa31.63■■■□□ 2.65
HCFC1R1-202ENST00000354679 ARHGEF5Q12774 1597 aa31.62■■■□□ 2.65
HCFC1R1-202ENST00000354679 A2MP01023 1474 aa31.6■■■□□ 2.65
HCFC1R1-202ENST00000354679 PLPPR3Q6T4P5 718 aa31.59■■■□□ 2.65
HCFC1R1-202ENST00000354679 PLXNC1O60486 1568 aa31.59■■■□□ 2.65
HCFC1R1-202ENST00000354679 ADGBQ8N7X0 1667 aa31.57■■■□□ 2.65
HCFC1R1-202ENST00000354679 TSPY4P0CV99 314 aa31.53■■■□□ 2.64
HCFC1R1-202ENST00000354679 TSPY10P0CW01 314 aa31.53■■■□□ 2.64
HCFC1R1-202ENST00000354679 ESF1Q9H501 851 aaKnown RBP31.51■■■□□ 2.63
HCFC1R1-202ENST00000354679 DHX29Q7Z478 1369 aaKnown RBP31.48■■■□□ 2.63
HCFC1R1-202ENST00000354679 PTPN23Q9H3S7 1636 aa31.48■■■□□ 2.63
HCFC1R1-202ENST00000354679 FGD6Q6ZV73 1430 aa31.48■■■□□ 2.63
HCFC1R1-202ENST00000354679 CEBPAP49715 358 aaPredicted RBP31.47■■■□□ 2.63
HCFC1R1-202ENST00000354679 CNTLNQ9NXG0 1405 aa31.45■■■□□ 2.63
HCFC1R1-202ENST00000354679 MAST1Q9Y2H9 1570 aa31.45■■■□□ 2.63
HCFC1R1-202ENST00000354679 LMTK3Q96Q04 1460 aa31.43■■■□□ 2.62
HCFC1R1-202ENST00000354679 TCOF1Q13428 1488 aaKnown RBP31.41■■■□□ 2.62
HCFC1R1-202ENST00000354679 GGT6Q6P531 493 aa31.41■■■□□ 2.62
HCFC1R1-202ENST00000354679 C3P01024 1663 aa31.39■■■□□ 2.62
HCFC1R1-202ENST00000354679 ABCC5O15440 1437 aa31.36■■■□□ 2.61
HCFC1R1-202ENST00000354679 MROH2AA6NES4 1674 aa31.35■■■□□ 2.61
HCFC1R1-202ENST00000354679 KIF3BO15066 747 aa31.35■■■□□ 2.61
HCFC1R1-202ENST00000354679 SHANK2Q9UPX8 1470 aa31.34■■■□□ 2.61
HCFC1R1-202ENST00000354679 PPP6R1Q9UPN7 881 aa31.34■■■□□ 2.61
HCFC1R1-202ENST00000354679 CROCC2H7BZ55 1655 aa31.33■■■□□ 2.61
HCFC1R1-202ENST00000354679 CLTCQ00610 1675 aaKnown RBP31.33■■■□□ 2.61
HCFC1R1-202ENST00000354679 DNMT1P26358 1616 aaKnown RBP31.33■■■□□ 2.61
HCFC1R1-202ENST00000354679 DAPK1P53355 1430 aa31.32■■■□□ 2.61
HCFC1R1-202ENST00000354679 PREX1Q8TCU6 1659 aa31.32■■■□□ 2.6
HCFC1R1-202ENST00000354679 ZMYM3Q14202 1370 aa31.3■■■□□ 2.6
HCFC1R1-202ENST00000354679 HSPA2P54652 639 aa31.28■■■□□ 2.6
HCFC1R1-202ENST00000354679 SETD1BQ9UPS6 1966 aaKnown RBP31.28■■■□□ 2.6
HCFC1R1-202ENST00000354679 UHRF1BP1Q6BDS2 1440 aa31.26■■■□□ 2.6
HCFC1R1-202ENST00000354679 DUOX2Q9NRD8 1548 aa31.24■■■□□ 2.59
HCFC1R1-202ENST00000354679 FAM50AQ14320 339 aaKnown RBP31.24■■■□□ 2.59
HCFC1R1-202ENST00000354679 KIF15Q9NS87 1388 aa31.23■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms