RNA–Protein interactions for RNA: ENST00000349258.8

THSD1-202, Transcript of thrombospondin type 1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene THSD1, Length 3,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-202ENST00000349258 TROQ12816 1431 aaPredicted RBP23.75■■□□□ 1.39
THSD1-202ENST00000349258 KDM6BO15054 1643 aa23.74■■□□□ 1.39
THSD1-202ENST00000349258 PTPRGP23470 1445 aa23.73■■□□□ 1.39
THSD1-202ENST00000349258 TCOF1Q13428 1488 aaKnown RBP23.73■■□□□ 1.39
THSD1-202ENST00000349258 TIMELESSQ9UNS1 1208 aa23.73■■□□□ 1.39
THSD1-202ENST00000349258 DAPK1P53355 1430 aa23.73■■□□□ 1.39
THSD1-202ENST00000349258 ABCC5O15440 1437 aa23.72■■□□□ 1.39
THSD1-202ENST00000349258 HNRNPMP52272 730 aaKnown RBP eCLIP23.7■■□□□ 1.38
THSD1-202ENST00000349258 ZNF326Q5BKZ1 582 aaKnown RBP23.68■■□□□ 1.38
THSD1-202ENST00000349258 KIF14Q15058 1648 aa23.66■■□□□ 1.38
THSD1-202ENST00000349258 L3MBTL2Q969R5 705 aa23.66■■□□□ 1.38
THSD1-202ENST00000349258 ATP10BO94823 1461 aa23.64■■□□□ 1.38
THSD1-202ENST00000349258 GPATCH8Q9UKJ3 1502 aaKnown RBP23.64■■□□□ 1.37
THSD1-202ENST00000349258 CAMSAP2Q08AD1 1489 aa23.62■■□□□ 1.37
THSD1-202ENST00000349258 TSPY4P0CV99 314 aa23.61■■□□□ 1.37
THSD1-202ENST00000349258 TSPY10P0CW01 314 aa23.61■■□□□ 1.37
THSD1-202ENST00000349258 CNGB1Q14028 1251 aaPredicted RBP23.58■■□□□ 1.37
THSD1-202ENST00000349258 DENND4BO75064 1496 aaPredicted RBP23.58■■□□□ 1.37
THSD1-202ENST00000349258 PKD2Q13563 968 aa23.56■■□□□ 1.36
THSD1-202ENST00000349258 HSPA5P11021 654 aaKnown RBP23.56■■□□□ 1.36
THSD1-202ENST00000349258 AKNAQ7Z591 1439 aa23.53■■□□□ 1.36
THSD1-202ENST00000349258 ANP32CO43423 234 aa23.53■■□□□ 1.36
THSD1-202ENST00000349258 POLR3GLQ9BT43 218 aa23.53■■□□□ 1.36
THSD1-202ENST00000349258 ROCK1Q13464 1354 aa23.52■■□□□ 1.36
THSD1-202ENST00000349258 NCOA1Q15788 1441 aa23.52■■□□□ 1.36
THSD1-202ENST00000349258 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.52■■□□□ 1.36
THSD1-202ENST00000349258 ANKRD30AQ9BXX3 1397 aa23.51■■□□□ 1.35
THSD1-202ENST00000349258 DNMT1P26358 1616 aaKnown RBP23.51■■□□□ 1.35
THSD1-202ENST00000349258 CHD1O14646 1710 aa23.5■■□□□ 1.35
THSD1-202ENST00000349258 GCC2Q8IWJ2 1684 aa23.5■■□□□ 1.35
THSD1-202ENST00000349258 ERCC6L2Q5T890 1561 aa23.49■■□□□ 1.35
THSD1-202ENST00000349258 ABCA8O94911 1581 aa23.49■■□□□ 1.35
THSD1-202ENST00000349258 NBPF8Q3BBV2 869 aa23.48■■□□□ 1.35
THSD1-202ENST00000349258 EIF4G2P78344 907 aaKnown RBP eCLIP23.48■■□□□ 1.35
THSD1-202ENST00000349258 NUP155O75694 1391 aa23.47■■□□□ 1.35
THSD1-202ENST00000349258 KDM2AQ9Y2K7 1162 aa23.46■■□□□ 1.35
THSD1-202ENST00000349258 ANKRD30BQ9BXX2 1392 aa23.46■■□□□ 1.35
THSD1-202ENST00000349258 ANKRD50Q9ULJ7 1429 aa23.44■■□□□ 1.34
THSD1-202ENST00000349258 C9orf84Q5VXU9 1444 aa23.42■■□□□ 1.34
THSD1-202ENST00000349258 ITSN2Q9NZM3 1697 aa23.39■■□□□ 1.33
THSD1-202ENST00000349258 ABCC10Q5T3U5 1492 aa23.39■■□□□ 1.33
THSD1-202ENST00000349258 KIF15Q9NS87 1388 aa23.39■■□□□ 1.33
THSD1-202ENST00000349258 WASHC2AQ641Q2 1341 aa23.39■■□□□ 1.33
THSD1-202ENST00000349258 MYT1LQ9UL68 1186 aa23.38■■□□□ 1.33
THSD1-202ENST00000349258 KDM5BQ9UGL1 1544 aa23.37■■□□□ 1.33
THSD1-202ENST00000349258 C11orf95C9JLR9 678 aaPredicted RBP23.37■■□□□ 1.33
THSD1-202ENST00000349258 PZPP20742 1482 aa23.35■■□□□ 1.33
THSD1-202ENST00000349258 RGL3Q3MIN7 710 aa23.34■■□□□ 1.33
THSD1-202ENST00000349258 CDC42BPAQ5VT25 1732 aa23.34■■□□□ 1.33
THSD1-202ENST00000349258 RPRD2Q5VT52 1461 aaKnown RBP23.32■■□□□ 1.32
THSD1-202ENST00000349258 ARHGAP5Q13017 1502 aa23.31■■□□□ 1.32
THSD1-202ENST00000349258 ADCY10Q96PN6 1610 aa23.3■■□□□ 1.32
THSD1-202ENST00000349258 DCAF11Q8TEB1 546 aa23.29■■□□□ 1.32
THSD1-202ENST00000349258 KIAA1107Q9UPP5 1409 aa23.28■■□□□ 1.32
THSD1-202ENST00000349258 BCANQ96GW7 911 aa23.25■■□□□ 1.31
THSD1-202ENST00000349258 ADGRL2O95490 1459 aa23.24■■□□□ 1.31
THSD1-202ENST00000349258 MBD5Q9P267 1494 aa23.23■■□□□ 1.31
THSD1-202ENST00000349258 SYCP2Q9BX26 1530 aa23.23■■□□□ 1.31
THSD1-202ENST00000349258 AFAP1Q8N556 730 aa23.23■■□□□ 1.31
THSD1-202ENST00000349258 EFCAB2Q5VUJ9 269 aa23.22■■□□□ 1.31
THSD1-202ENST00000349258 CCDC141Q6ZP82 1450 aa23.21■■□□□ 1.31
THSD1-202ENST00000349258 TEX14Q8IWB6 1497 aa23.21■■□□□ 1.31
THSD1-202ENST00000349258 TTC37Q6PGP7 1564 aa23.21■■□□□ 1.31
THSD1-202ENST00000349258 SAMD9LQ8IVG5 1584 aa23.2■■□□□ 1.3
THSD1-202ENST00000349258 ABCC2Q92887 1545 aa23.2■■□□□ 1.3
THSD1-202ENST00000349258 ADGBQ8N7X0 1667 aa23.19■■□□□ 1.3
THSD1-202ENST00000349258 CARD11Q9BXL7 1154 aa23.19■■□□□ 1.3
THSD1-202ENST00000349258 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.19■■□□□ 1.3
THSD1-202ENST00000349258 CCER2I3L3R5 266 aa23.18■■□□□ 1.3
THSD1-202ENST00000349258 HNRNPUQ00839 825 aaKnown RBP eCLIP23.18■■□□□ 1.3
THSD1-202ENST00000349258 CCDC184Q52MB2 194 aa23.18■■□□□ 1.3
THSD1-202ENST00000349258 SENP3-EIF4A1A0A087X0R7 540 aa23.17■■□□□ 1.3
THSD1-202ENST00000349258 RSPH4AQ5TD94 716 aa23.17■■□□□ 1.3
THSD1-202ENST00000349258 FAM9BQ8IZU0 186 aa23.17■■□□□ 1.3
THSD1-202ENST00000349258 KIF7Q2M1P5 1343 aa23.17■■□□□ 1.3
THSD1-202ENST00000349258 CROCC2H7BZ55 1655 aa23.16■■□□□ 1.3
THSD1-202ENST00000349258 CDC42BPBQ9Y5S2 1711 aa23.15■■□□□ 1.3
THSD1-202ENST00000349258 CCDC7Q96M83 1385 aa23.15■■□□□ 1.3
THSD1-202ENST00000349258 SUPT16HQ9Y5B9 1047 aaKnown RBP23.15■■□□□ 1.3
THSD1-202ENST00000349258 SHROOM2Q13796 1616 aa23.14■■□□□ 1.29
THSD1-202ENST00000349258 USP47Q96K76 1375 aa23.12■■□□□ 1.29
THSD1-202ENST00000349258 SHANK2Q9UPX8 1470 aa23.12■■□□□ 1.29
THSD1-202ENST00000349258 PLEKHH2Q8IVE3 1493 aa23.12■■□□□ 1.29
THSD1-202ENST00000349258 SPAG9O60271 1321 aaKnown RBP23.09■■□□□ 1.29
THSD1-202ENST00000349258 PREX2Q70Z35 1606 aa23.09■■□□□ 1.29
THSD1-202ENST00000349258 MRS2Q9HD23 443 aa23.09■■□□□ 1.29
THSD1-202ENST00000349258 FKBP8Q14318 412 aa23.09■■□□□ 1.29
THSD1-202ENST00000349258 ARHGEF12Q9NZN5 1544 aa23.08■■□□□ 1.29
THSD1-202ENST00000349258 ST20-MTHFSA0A0A6YYL1 179 aa23.08■■□□□ 1.29
THSD1-202ENST00000349258 TRAPPC8Q9Y2L5 1435 aa23.07■■□□□ 1.28
THSD1-202ENST00000349258 OSCARQ8IYS5 282 aa23.05■■□□□ 1.28
THSD1-202ENST00000349258 PRKRIP1Q9H875 184 aaPredicted RBP23.05■■□□□ 1.28
THSD1-202ENST00000349258 CLASP1Q7Z460 1538 aa23.05■■□□□ 1.28
THSD1-202ENST00000349258 NPM1P06748 294 aaKnown RBP eCLIP23.05■■□□□ 1.28
THSD1-202ENST00000349258 CCDC144AA2RUR9 1427 aa23.05■■□□□ 1.28
THSD1-202ENST00000349258 PLCH2O75038 1416 aa23.05■■□□□ 1.28
THSD1-202ENST00000349258 CNTLNQ9NXG0 1405 aa23.05■■□□□ 1.28
THSD1-202ENST00000349258 ZCCHC11Q5TAX3 1644 aaKnown RBP23.04■■□□□ 1.28
THSD1-202ENST00000349258 NBPF1Q3BBV0 1214 aa23.04■■□□□ 1.28
THSD1-202ENST00000349258 ARHGEF5Q12774 1597 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms