RNA–Protein interactions for RNA: ENST00000348386.7

CAST-205, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 2,272 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-205ENST00000348386 ASXL2Q76L83 1435 aa11.83□□□□□ -0.51
CAST-205ENST00000348386 GTF3C3Q9Y5Q9 886 aa11.83□□□□□ -0.52
CAST-205ENST00000348386 CFAP43Q8NDM7 1665 aa11.83□□□□□ -0.52
CAST-205ENST00000348386 TROQ12816 1431 aaPredicted RBP11.83□□□□□ -0.52
CAST-205ENST00000348386 EHBP1L1Q8N3D4 1523 aa11.8□□□□□ -0.52
CAST-205ENST00000348386 PHLDB1Q86UU1 1377 aa11.79□□□□□ -0.52
CAST-205ENST00000348386 NCOA2Q15596 1464 aa11.79□□□□□ -0.52
CAST-205ENST00000348386 WDR7Q9Y4E6 1490 aa11.79□□□□□ -0.52
CAST-205ENST00000348386 CCNB3Q8WWL7 1395 aa11.78□□□□□ -0.52
CAST-205ENST00000348386 ZNF777Q9ULD5 760 aaPredicted RBP11.77□□□□□ -0.52
CAST-205ENST00000348386 FAM69CQ0P6D2 419 aa11.77□□□□□ -0.53
CAST-205ENST00000348386 KIF14Q15058 1648 aa11.76□□□□□ -0.53
CAST-205ENST00000348386 FAM50AQ14320 339 aaKnown RBP11.76□□□□□ -0.53
CAST-205ENST00000348386 SLC4A2P04920 1241 aa11.75□□□□□ -0.53
CAST-205ENST00000348386 CFDP1Q9UEE9 299 aaPredicted RBP11.75□□□□□ -0.53
CAST-205ENST00000348386 SUPT6HQ7KZ85 1726 aaKnown RBP11.74□□□□□ -0.53
CAST-205ENST00000348386 ITGAEP38570 1179 aa11.74□□□□□ -0.53
CAST-205ENST00000348386 TRHP20396 242 aaPredicted RBP11.74□□□□□ -0.53
CAST-205ENST00000348386 TRIM26Q12899 539 aaPredicted RBP11.74□□□□□ -0.53
CAST-205ENST00000348386 MAPKBP1O60336 1514 aa11.73□□□□□ -0.53
CAST-205ENST00000348386 PCGF6Q9BYE7 350 aa11.72□□□□□ -0.53
CAST-205ENST00000348386 ZNF644Q9H582 1327 aaPredicted RBP11.72□□□□□ -0.53
CAST-205ENST00000348386 ABCC10Q5T3U5 1492 aa11.72□□□□□ -0.53
CAST-205ENST00000348386 MYOM3Q5VTT5 1437 aa11.72□□□□□ -0.53
CAST-205ENST00000348386 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.72□□□□□ -0.53
CAST-205ENST00000348386 GPATCH8Q9UKJ3 1502 aaKnown RBP11.71□□□□□ -0.53
CAST-205ENST00000348386 HOMEZQ8IX15 550 aa11.7□□□□□ -0.54
CAST-205ENST00000348386 TTC37Q6PGP7 1564 aa11.7□□□□□ -0.54
CAST-205ENST00000348386 CD109Q6YHK3 1445 aa11.69□□□□□ -0.54
CAST-205ENST00000348386 FGD6Q6ZV73 1430 aa11.69□□□□□ -0.54
CAST-205ENST00000348386 EFCAB2Q5VUJ9 269 aa11.68□□□□□ -0.54
CAST-205ENST00000348386 PLCH2O75038 1416 aa11.67□□□□□ -0.54
CAST-205ENST00000348386 HNRNPMP52272 730 aaKnown RBP eCLIP11.67□□□□□ -0.54
CAST-205ENST00000348386 ARHGAP5Q13017 1502 aa11.67□□□□□ -0.54
CAST-205ENST00000348386 RRBP1Q9P2E9 1410 aaKnown RBP11.66□□□□□ -0.54
CAST-205ENST00000348386 MIA2Q96PC5 1412 aa11.65□□□□□ -0.54
CAST-205ENST00000348386 DIP2BQ9P265 1576 aa11.65□□□□□ -0.55
CAST-205ENST00000348386 CHIC2Q9UKJ5 165 aa11.64□□□□□ -0.55
CAST-205ENST00000348386 ABCA9Q8IUA7 1624 aa11.64□□□□□ -0.55
CAST-205ENST00000348386 FANCAO15360 1455 aa11.63□□□□□ -0.55
CAST-205ENST00000348386 PTPN23Q9H3S7 1636 aa11.62□□□□□ -0.55
CAST-205ENST00000348386 CAMSAP2Q08AD1 1489 aa11.62□□□□□ -0.55
CAST-205ENST00000348386 CDC42BPAQ5VT25 1732 aa11.62□□□□□ -0.55
CAST-205ENST00000348386 GLI2P10070 1586 aa11.61□□□□□ -0.55
CAST-205ENST00000348386 PREX2Q70Z35 1606 aa11.6□□□□□ -0.55
CAST-205ENST00000348386 ITSN2Q9NZM3 1697 aa11.6□□□□□ -0.55
CAST-205ENST00000348386 MYO5CQ9NQX4 1742 aa11.6□□□□□ -0.55
CAST-205ENST00000348386 MAPK8IP2Q13387 824 aaPredicted RBP11.6□□□□□ -0.55
CAST-205ENST00000348386 TMEM132AQ24JP5 1023 aa11.6□□□□□ -0.55
CAST-205ENST00000348386 MYT1LQ9UL68 1186 aa11.6□□□□□ -0.55
CAST-205ENST00000348386 AKNAQ7Z591 1439 aa11.6□□□□□ -0.55
CAST-205ENST00000348386 AFAP1Q8N556 730 aa11.6□□□□□ -0.55
CAST-205ENST00000348386 CDC42BPBQ9Y5S2 1711 aa11.59□□□□□ -0.55
CAST-205ENST00000348386 TCOF1Q13428 1488 aaKnown RBP11.59□□□□□ -0.55
CAST-205ENST00000348386 PKD2Q13563 968 aa11.59□□□□□ -0.55
CAST-205ENST00000348386 SCAPERQ9BY12 1400 aa11.59□□□□□ -0.55
CAST-205ENST00000348386 RAPGEF3O95398 923 aa11.58□□□□□ -0.55
CAST-205ENST00000348386 TSPY4P0CV99 314 aa11.58□□□□□ -0.55
CAST-205ENST00000348386 TSPY10P0CW01 314 aa11.58□□□□□ -0.55
CAST-205ENST00000348386 ADGRL1O94910 1474 aa11.58□□□□□ -0.56
CAST-205ENST00000348386 SAMD9LQ8IVG5 1584 aa11.58□□□□□ -0.56
CAST-205ENST00000348386 MAP3K4Q9Y6R4 1608 aa11.57□□□□□ -0.56
CAST-205ENST00000348386 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.57□□□□□ -0.56
CAST-205ENST00000348386 RRP7BPQ9NSQ0 103 aa11.57□□□□□ -0.56
CAST-205ENST00000348386 TSPOAP1O95153 1857 aa11.57□□□□□ -0.56
CAST-205ENST00000348386 SYCP2Q9BX26 1530 aa11.57□□□□□ -0.56
CAST-205ENST00000348386 ARHGEF12Q9NZN5 1544 aa11.57□□□□□ -0.56
CAST-205ENST00000348386 PTPRKQ15262 1439 aa11.57□□□□□ -0.56
CAST-205ENST00000348386 ABCC5O15440 1437 aa11.56□□□□□ -0.56
CAST-205ENST00000348386 TRAPPC8Q9Y2L5 1435 aa11.56□□□□□ -0.56
CAST-205ENST00000348386 ARAP3Q8WWN8 1544 aa11.56□□□□□ -0.56
CAST-205ENST00000348386 DAPK1P53355 1430 aa11.56□□□□□ -0.56
CAST-205ENST00000348386 PAXIP1Q6ZW49 1069 aaPredicted RBP11.56□□□□□ -0.56
CAST-205ENST00000348386 KIF13AQ9H1H9 1805 aa11.55□□□□□ -0.56
CAST-205ENST00000348386 MBD5Q9P267 1494 aa11.55□□□□□ -0.56
CAST-205ENST00000348386 PLEKHH2Q8IVE3 1493 aa11.55□□□□□ -0.56
CAST-205ENST00000348386 KIAA1107Q9UPP5 1409 aa11.55□□□□□ -0.56
CAST-205ENST00000348386 RSPH4AQ5TD94 716 aa11.55□□□□□ -0.56
CAST-205ENST00000348386 TEX14Q8IWB6 1497 aa11.54□□□□□ -0.56
CAST-205ENST00000348386 NEO1Q92859 1461 aa11.54□□□□□ -0.56
CAST-205ENST00000348386 ATXN8OSP0DMR3 200 aa11.54□□□□□ -0.56
CAST-205ENST00000348386 CFAP44Q96MT7 982 aa11.54□□□□□ -0.56
CAST-205ENST00000348386 SPAG9O60271 1321 aaKnown RBP11.54□□□□□ -0.56
CAST-205ENST00000348386 ABCC1P33527 1531 aa11.53□□□□□ -0.56
CAST-205ENST00000348386 CCDC141Q6ZP82 1450 aa11.53□□□□□ -0.56
CAST-205ENST00000348386 TSHZ2Q9NRE2 1034 aa11.52□□□□□ -0.56
CAST-205ENST00000348386 PODXL2Q9NZ53 605 aa11.52□□□□□ -0.56
CAST-205ENST00000348386 ATF5Q9Y2D1 282 aaPredicted RBP11.52□□□□□ -0.57
CAST-205ENST00000348386 DENND4BO75064 1496 aaPredicted RBP11.52□□□□□ -0.57
CAST-205ENST00000348386 C9orf84Q5VXU9 1444 aa11.51□□□□□ -0.57
CAST-205ENST00000348386 PPRC1Q5VV67 1664 aaKnown RBP11.51□□□□□ -0.57
CAST-205ENST00000348386 DNMT1P26358 1616 aaKnown RBP11.5□□□□□ -0.57
CAST-205ENST00000348386 CFAP74Q9C0B2 1584 aa11.49□□□□□ -0.57
CAST-205ENST00000348386 COL17A1Q9UMD9 1497 aaPredicted RBP11.49□□□□□ -0.57
CAST-205ENST00000348386 ANKRD30AQ9BXX3 1397 aa11.49□□□□□ -0.57
CAST-205ENST00000348386 IFNLR1Q8IU57 520 aaPredicted RBP11.49□□□□□ -0.57
CAST-205ENST00000348386 POGZQ7Z3K3 1410 aa11.49□□□□□ -0.57
CAST-205ENST00000348386 ZNF518AQ6AHZ1 1483 aa11.48□□□□□ -0.57
CAST-205ENST00000348386 ARHGEF5Q12774 1597 aa11.48□□□□□ -0.57
CAST-205ENST00000348386 NCOA1Q15788 1441 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms