RNA–Protein interactions for RNA: ENST00000343327.6

PTBP3-203, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 2 BASIC

Gene PTBP3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-203ENST00000343327 MAP3K1Q13233 1512 aa12.01□□□□□ -0.49
PTBP3-203ENST00000343327 CDK11AQ9UQ88 783 aaPredicted RBP12□□□□□ -0.49
PTBP3-203ENST00000343327 VPS8Q8N3P4 1428 aa11.98□□□□□ -0.49
PTBP3-203ENST00000343327 KDM6BO15054 1643 aa11.98□□□□□ -0.49
PTBP3-203ENST00000343327 CD109Q6YHK3 1445 aa11.98□□□□□ -0.49
PTBP3-203ENST00000343327 RBM19Q9Y4C8 960 aaKnown RBP11.97□□□□□ -0.49
PTBP3-203ENST00000343327 TROQ12816 1431 aaPredicted RBP11.97□□□□□ -0.49
PTBP3-203ENST00000343327 PCF11O94913 1555 aaKnown RBP11.97□□□□□ -0.49
PTBP3-203ENST00000343327 PLEKHD1A6NEE1 506 aa11.96□□□□□ -0.49
PTBP3-203ENST00000343327 KIF14Q15058 1648 aa11.95□□□□□ -0.5
PTBP3-203ENST00000343327 CLSPNQ9HAW4 1339 aa11.95□□□□□ -0.5
PTBP3-203ENST00000343327 SIN3AQ96ST3 1273 aa11.94□□□□□ -0.5
PTBP3-203ENST00000343327 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.94□□□□□ -0.55e-9■□□□□ 10.1
PTBP3-203ENST00000343327 LRRIQ1Q96JM4 1722 aa11.92□□□□□ -0.5
PTBP3-203ENST00000343327 PLCH2O75038 1416 aa11.92□□□□□ -0.5
PTBP3-203ENST00000343327 ZMYM4Q5VZL5 1548 aa11.91□□□□□ -0.5
PTBP3-203ENST00000343327 MYO5CQ9NQX4 1742 aa11.91□□□□□ -0.5
PTBP3-203ENST00000343327 IRX6P78412 446 aaPredicted RBP11.91□□□□□ -0.5
PTBP3-203ENST00000343327 MAGI2Q86UL8 1455 aa11.91□□□□□ -0.5
PTBP3-203ENST00000343327 P3H3Q8IVL6 736 aa11.9□□□□□ -0.5
PTBP3-203ENST00000343327 EHBP1L1Q8N3D4 1523 aa11.9□□□□□ -0.5
PTBP3-203ENST00000343327 CDK13Q14004 1512 aaKnown RBP11.9□□□□□ -0.5
PTBP3-203ENST00000343327 PREX2Q70Z35 1606 aa11.88□□□□□ -0.51
PTBP3-203ENST00000343327 MSH5O43196 834 aa11.88□□□□□ -0.51
PTBP3-203ENST00000343327 TTC37Q6PGP7 1564 aa11.88□□□□□ -0.51
PTBP3-203ENST00000343327 TSPOAP1O95153 1857 aa11.88□□□□□ -0.51
PTBP3-203ENST00000343327 NEFLP07196 543 aa11.87□□□□□ -0.51
PTBP3-203ENST00000343327 PLEKHH2Q8IVE3 1493 aa11.86□□□□□ -0.51
PTBP3-203ENST00000343327 FANCAO15360 1455 aa11.85□□□□□ -0.51
PTBP3-203ENST00000343327 REREQ9P2R6 1566 aa11.84□□□□□ -0.51
PTBP3-203ENST00000343327 RICTORQ6R327 1708 aa11.84□□□□□ -0.51
PTBP3-203ENST00000343327 AKNAQ7Z591 1439 aa11.84□□□□□ -0.51
PTBP3-203ENST00000343327 TIAM1Q13009 1591 aa11.84□□□□□ -0.51
PTBP3-203ENST00000343327 ITSN2Q9NZM3 1697 aa11.84□□□□□ -0.51
PTBP3-203ENST00000343327 DENND4BO75064 1496 aaPredicted RBP11.83□□□□□ -0.52
PTBP3-203ENST00000343327 KIAA1107Q9UPP5 1409 aa11.83□□□□□ -0.52
PTBP3-203ENST00000343327 FRMPD1Q5SYB0 1578 aa11.83□□□□□ -0.52
PTBP3-203ENST00000343327 KDM5CP41229 1560 aa11.82□□□□□ -0.52
PTBP3-203ENST00000343327 COL17A1Q9UMD9 1497 aaPredicted RBP11.82□□□□□ -0.52
PTBP3-203ENST00000343327 ATP1B4Q9UN42 357 aaPredicted RBP11.81□□□□□ -0.52
PTBP3-203ENST00000343327 ARHGEF40Q8TER5 1519 aa11.81□□□□□ -0.52
PTBP3-203ENST00000343327 EFCAB2Q5VUJ9 269 aa11.81□□□□□ -0.52
PTBP3-203ENST00000343327 POGZQ7Z3K3 1410 aa11.81□□□□□ -0.52
PTBP3-203ENST00000343327 FAM50AQ14320 339 aaKnown RBP11.8□□□□□ -0.52
PTBP3-203ENST00000343327 CDC42BPAQ5VT25 1732 aa11.8□□□□□ -0.52
PTBP3-203ENST00000343327 SUPT6HQ7KZ85 1726 aaKnown RBP11.8□□□□□ -0.52
PTBP3-203ENST00000343327 CDC42BPBQ9Y5S2 1711 aa11.8□□□□□ -0.52
PTBP3-203ENST00000343327 RAB3GAP2Q9H2M9 1393 aa11.8□□□□□ -0.52
PTBP3-203ENST00000343327 ABCC1P33527 1531 aa11.8□□□□□ -0.52
PTBP3-203ENST00000343327 ZNF518AQ6AHZ1 1483 aa11.79□□□□□ -0.52
PTBP3-203ENST00000343327 MLH3Q9UHC1 1453 aa11.78□□□□□ -0.52
PTBP3-203ENST00000343327 CCNB3Q8WWL7 1395 aa11.78□□□□□ -0.52
PTBP3-203ENST00000343327 ADGRL1O94910 1474 aa11.78□□□□□ -0.52
PTBP3-203ENST00000343327 GPATCH8Q9UKJ3 1502 aaKnown RBP11.78□□□□□ -0.52
PTBP3-203ENST00000343327 PPP1R15AO75807 674 aaPredicted RBP11.78□□□□□ -0.52
PTBP3-203ENST00000343327 ANP32CO43423 234 aa11.77□□□□□ -0.53
PTBP3-203ENST00000343327 ARHGAP5Q13017 1502 aa11.77□□□□□ -0.53
PTBP3-203ENST00000343327 LRRC9Q6ZRR7 1453 aa11.76□□□□□ -0.53
PTBP3-203ENST00000343327 MTUS2Q5JR59 1369 aa11.75□□□□□ -0.53
PTBP3-203ENST00000343327 MIA2Q96PC5 1412 aa11.75□□□□□ -0.53
PTBP3-203ENST00000343327 RSPH4AQ5TD94 716 aa11.75□□□□□ -0.53
PTBP3-203ENST00000343327 AGLP35573 1532 aa11.75□□□□□ -0.53
PTBP3-203ENST00000343327 ZFYVE16Q7Z3T8 1539 aa11.75□□□□□ -0.53
PTBP3-203ENST00000343327 FAM135AQ9P2D6 1515 aa11.75□□□□□ -0.53
PTBP3-203ENST00000343327 ARHGEF5Q12774 1597 aa11.74□□□□□ -0.53
PTBP3-203ENST00000343327 HECW2Q9P2P5 1572 aa11.74□□□□□ -0.53
PTBP3-203ENST00000343327 HNRNPUQ00839 825 aaKnown RBP eCLIP11.73□□□□□ -0.53
PTBP3-203ENST00000343327 RTEL1-TNFRSF6BF6WH68 1400 aa11.73□□□□□ -0.53
PTBP3-203ENST00000343327 ERICH6Q7L0X2 663 aa11.73□□□□□ -0.53
PTBP3-203ENST00000343327 SCAPERQ9BY12 1400 aa11.72□□□□□ -0.53
PTBP3-203ENST00000343327 SAMD9LQ8IVG5 1584 aa11.72□□□□□ -0.53
PTBP3-203ENST00000343327 NCOA2Q15596 1464 aa11.72□□□□□ -0.53
PTBP3-203ENST00000343327 MAST1Q9Y2H9 1570 aa11.71□□□□□ -0.54
PTBP3-203ENST00000343327 ATP10AO60312 1499 aa11.71□□□□□ -0.54
PTBP3-203ENST00000343327 RRBP1Q9P2E9 1410 aaKnown RBP11.71□□□□□ -0.54
PTBP3-203ENST00000343327 C9orf84Q5VXU9 1444 aa11.7□□□□□ -0.54
PTBP3-203ENST00000343327 BCORL1Q5H9F3 1711 aa11.7□□□□□ -0.54
PTBP3-203ENST00000343327 INO80Q9ULG1 1556 aaPredicted RBP11.7□□□□□ -0.54
PTBP3-203ENST00000343327 ADAMTSL3P82987 1691 aa11.7□□□□□ -0.54
PTBP3-203ENST00000343327 SENP3-EIF4A1A0A087X0R7 540 aa11.68□□□□□ -0.54
PTBP3-203ENST00000343327 CNGB1Q14028 1251 aaPredicted RBP11.68□□□□□ -0.54
PTBP3-203ENST00000343327 TCOF1Q13428 1488 aaKnown RBP11.67□□□□□ -0.54
PTBP3-203ENST00000343327 MBD5Q9P267 1494 aa11.67□□□□□ -0.54
PTBP3-203ENST00000343327 DIP2CQ9Y2E4 1556 aa11.67□□□□□ -0.54
PTBP3-203ENST00000343327 SHANK2Q9UPX8 1470 aa11.66□□□□□ -0.54
PTBP3-203ENST00000343327 ADGBQ8N7X0 1667 aa11.66□□□□□ -0.54
PTBP3-203ENST00000343327 MYOM3Q5VTT5 1437 aa11.66□□□□□ -0.54
PTBP3-203ENST00000343327 ARID3CA6NKF2 412 aa11.66□□□□□ -0.54
PTBP3-203ENST00000343327 ARHGEF12Q9NZN5 1544 aa11.66□□□□□ -0.54
PTBP3-203ENST00000343327 PLXNC1O60486 1568 aa11.66□□□□□ -0.54
PTBP3-203ENST00000343327 B4GALNT3Q6L9W6 998 aa11.65□□□□□ -0.54
PTBP3-203ENST00000343327 PPP6R1Q9UPN7 881 aa11.65□□□□□ -0.54
PTBP3-203ENST00000343327 NBR1Q14596 966 aa11.65□□□□□ -0.54
PTBP3-203ENST00000343327 SETD5Q9C0A6 1442 aa11.65□□□□□ -0.55
PTBP3-203ENST00000343327 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.64□□□□□ -0.55
PTBP3-203ENST00000343327 KIDINS220Q9ULH0 1771 aa11.64□□□□□ -0.55
PTBP3-203ENST00000343327 CCER2I3L3R5 266 aa11.64□□□□□ -0.55
PTBP3-203ENST00000343327 CCDC141Q6ZP82 1450 aa11.64□□□□□ -0.55
PTBP3-203ENST00000343327 SYCP2Q9BX26 1530 aa11.64□□□□□ -0.55
PTBP3-203ENST00000343327 CCDC184Q52MB2 194 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms