RNA–Protein interactions for RNA: ENST00000342669.7

SNRPD2-201, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-201ENST00000342669 POGZQ7Z3K3 1410 aa16.54■□□□□ 0.24
SNRPD2-201ENST00000342669 SCAPERQ9BY12 1400 aa16.54■□□□□ 0.24
SNRPD2-201ENST00000342669 RIMS1Q86UR5 1692 aaKnown RBP16.54■□□□□ 0.24
SNRPD2-201ENST00000342669 EFCAB2Q5VUJ9 269 aa16.54■□□□□ 0.24
SNRPD2-201ENST00000342669 KIF14Q15058 1648 aa16.54■□□□□ 0.24
SNRPD2-201ENST00000342669 YEATS2Q9ULM3 1422 aa16.53■□□□□ 0.24
SNRPD2-201ENST00000342669 LRRIQ1Q96JM4 1722 aa16.52■□□□□ 0.24
SNRPD2-201ENST00000342669 CLIP1P30622 1438 aa16.52■□□□□ 0.23
SNRPD2-201ENST00000342669 TROQ12816 1431 aaPredicted RBP16.52■□□□□ 0.23
SNRPD2-201ENST00000342669 SIGLEC1Q9BZZ2 1709 aa16.49■□□□□ 0.23
SNRPD2-201ENST00000342669 ARHGAP5Q13017 1502 aa16.49■□□□□ 0.23
SNRPD2-201ENST00000342669 PCF11O94913 1555 aaKnown RBP16.47■□□□□ 0.23
SNRPD2-201ENST00000342669 FER1L4A9Z1Z3 1794 aa16.46■□□□□ 0.23
SNRPD2-201ENST00000342669 MLECQ14165 292 aa16.46■□□□□ 0.23
SNRPD2-201ENST00000342669 PLPPR3Q6T4P5 718 aa16.46■□□□□ 0.23
SNRPD2-201ENST00000342669 ATP10AO60312 1499 aa16.46■□□□□ 0.23
SNRPD2-201ENST00000342669 CCDC18Q5T9S5 1454 aa16.46■□□□□ 0.23
SNRPD2-201ENST00000342669 CASKIN1Q8WXD9 1431 aa16.45■□□□□ 0.22
SNRPD2-201ENST00000342669 ZNF518AQ6AHZ1 1483 aa16.45■□□□□ 0.22
SNRPD2-201ENST00000342669 CDC42BPBQ9Y5S2 1711 aa16.45■□□□□ 0.22
SNRPD2-201ENST00000342669 C9orf84Q5VXU9 1444 aa16.45■□□□□ 0.22
SNRPD2-201ENST00000342669 LMTK3Q96Q04 1460 aa16.44■□□□□ 0.22
SNRPD2-201ENST00000342669 MYT1LQ9UL68 1186 aa16.42■□□□□ 0.22
SNRPD2-201ENST00000342669 AFAP1Q8N556 730 aa16.41■□□□□ 0.22
SNRPD2-201ENST00000342669 KDM5CP41229 1560 aa16.41■□□□□ 0.22
SNRPD2-201ENST00000342669 PREX2Q70Z35 1606 aa16.41■□□□□ 0.22
SNRPD2-201ENST00000342669 FYCO1Q9BQS8 1478 aa16.39■□□□□ 0.21
SNRPD2-201ENST00000342669 ARHGEF12Q9NZN5 1544 aa16.39■□□□□ 0.21
SNRPD2-201ENST00000342669 CDC42BPAQ5VT25 1732 aa16.38■□□□□ 0.21
SNRPD2-201ENST00000342669 HSPA2P54652 639 aa16.37■□□□□ 0.21
SNRPD2-201ENST00000342669 ITSN2Q9NZM3 1697 aa16.37■□□□□ 0.21
SNRPD2-201ENST00000342669 ABCC1P33527 1531 aa16.36■□□□□ 0.21
SNRPD2-201ENST00000342669 DIP2CQ9Y2E4 1556 aa16.35■□□□□ 0.21
SNRPD2-201ENST00000342669 FBXO41Q8TF61 875 aa16.35■□□□□ 0.21
SNRPD2-201ENST00000342669 MLH3Q9UHC1 1453 aa16.35■□□□□ 0.21
SNRPD2-201ENST00000342669 REREQ9P2R6 1566 aa16.34■□□□□ 0.21
SNRPD2-201ENST00000342669 TRAPPC8Q9Y2L5 1435 aa16.34■□□□□ 0.21
SNRPD2-201ENST00000342669 ABCA6Q8N139 1617 aa16.34■□□□□ 0.21
SNRPD2-201ENST00000342669 SETD1BQ9UPS6 1966 aaKnown RBP16.33■□□□□ 0.21
SNRPD2-201ENST00000342669 PREX1Q8TCU6 1659 aa16.32■□□□□ 0.2
SNRPD2-201ENST00000342669 CEBPAP49715 358 aaPredicted RBP16.31■□□□□ 0.2
SNRPD2-201ENST00000342669 ZNF777Q9ULD5 760 aaPredicted RBP16.3■□□□□ 0.2
SNRPD2-201ENST00000342669 KIDINS220Q9ULH0 1771 aa16.3■□□□□ 0.2
SNRPD2-201ENST00000342669 ESF1Q9H501 851 aaKnown RBP16.29■□□□□ 0.2
SNRPD2-201ENST00000342669 AGLP35573 1532 aa16.28■□□□□ 0.2
SNRPD2-201ENST00000342669 GPATCH8Q9UKJ3 1502 aaKnown RBP16.28■□□□□ 0.2
SNRPD2-201ENST00000342669 SAMD9LQ8IVG5 1584 aa16.27■□□□□ 0.2
SNRPD2-201ENST00000342669 C3P01024 1663 aa16.26■□□□□ 0.19
SNRPD2-201ENST00000342669 SYCP2Q9BX26 1530 aa16.25■□□□□ 0.19
SNRPD2-201ENST00000342669 MTUS2Q5JR59 1369 aa16.25■□□□□ 0.19
SNRPD2-201ENST00000342669 HNRNPMP52272 730 aaKnown RBP eCLIP16.24■□□□□ 0.19
SNRPD2-201ENST00000342669 CFDP1Q9UEE9 299 aaPredicted RBP16.24■□□□□ 0.19
SNRPD2-201ENST00000342669 UHRF1BP1Q6BDS2 1440 aa16.24■□□□□ 0.19
SNRPD2-201ENST00000342669 CCNB3Q8WWL7 1395 aa16.24■□□□□ 0.19
SNRPD2-201ENST00000342669 PLEKHH2Q8IVE3 1493 aa16.23■□□□□ 0.19
SNRPD2-201ENST00000342669 SPAG9O60271 1321 aaKnown RBP16.23■□□□□ 0.19
SNRPD2-201ENST00000342669 KIAA1107Q9UPP5 1409 aa16.22■□□□□ 0.19
SNRPD2-201ENST00000342669 CNTLNQ9NXG0 1405 aa16.21■□□□□ 0.19
SNRPD2-201ENST00000342669 SUPT6HQ7KZ85 1726 aaKnown RBP16.21■□□□□ 0.19
SNRPD2-201ENST00000342669 STRCQ7RTU9 1775 aa16.21■□□□□ 0.18
SNRPD2-201ENST00000342669 DMRT2Q9Y5R5 561 aa16.2■□□□□ 0.18
SNRPD2-201ENST00000342669 ATP7AQ04656 1500 aa16.19■□□□□ 0.18
SNRPD2-201ENST00000342669 CERKQ8TCT0 537 aa16.19■□□□□ 0.18
SNRPD2-201ENST00000342669 EHBP1L1Q8N3D4 1523 aa16.18■□□□□ 0.18
SNRPD2-201ENST00000342669 CEP162Q5TB80 1403 aa16.18■□□□□ 0.18
SNRPD2-201ENST00000342669 MROH2AA6NES4 1674 aa16.18■□□□□ 0.18
SNRPD2-201ENST00000342669 INO80Q9ULG1 1556 aaPredicted RBP16.17■□□□□ 0.18
SNRPD2-201ENST00000342669 TIAM1Q13009 1591 aa16.16■□□□□ 0.18
SNRPD2-201ENST00000342669 A2MP01023 1474 aa16.15■□□□□ 0.18
SNRPD2-201ENST00000342669 ADGBQ8N7X0 1667 aa16.14■□□□□ 0.17
SNRPD2-201ENST00000342669 PLXNC1O60486 1568 aa16.13■□□□□ 0.17
SNRPD2-201ENST00000342669 CLTCQ00610 1675 aaKnown RBP16.13■□□□□ 0.17
SNRPD2-201ENST00000342669 ZNF644Q9H582 1327 aaPredicted RBP16.13■□□□□ 0.17
SNRPD2-201ENST00000342669 ZMYM3Q14202 1370 aa16.13■□□□□ 0.17
SNRPD2-201ENST00000342669 NPATQ14207 1427 aa16.12■□□□□ 0.17
SNRPD2-201ENST00000342669 PTPRTO14522 1441 aa16.11■□□□□ 0.17
SNRPD2-201ENST00000342669 GGT6Q6P531 493 aa16.1■□□□□ 0.17
SNRPD2-201ENST00000342669 MBD5Q9P267 1494 aa16.1■□□□□ 0.17
SNRPD2-201ENST00000342669 PPP6R1Q9UPN7 881 aa16.09■□□□□ 0.17
SNRPD2-201ENST00000342669 RTEL1-TNFRSF6BF6WH68 1400 aa16.08■□□□□ 0.16
SNRPD2-201ENST00000342669 NCOA1Q15788 1441 aa16.07■□□□□ 0.16
SNRPD2-201ENST00000342669 NCOA2Q15596 1464 aa16.07■□□□□ 0.16
SNRPD2-201ENST00000342669 CAMSAP1Q5T5Y3 1602 aa16.06■□□□□ 0.16
SNRPD2-201ENST00000342669 RSPH4AQ5TD94 716 aa16.05■□□□□ 0.16
SNRPD2-201ENST00000342669 CCDC141Q6ZP82 1450 aa16.04■□□□□ 0.16
SNRPD2-201ENST00000342669 DHX29Q7Z478 1369 aaKnown RBP16.04■□□□□ 0.16
SNRPD2-201ENST00000342669 MYO3AQ8NEV4 1616 aa16.04■□□□□ 0.16
SNRPD2-201ENST00000342669 CAMSAP2Q08AD1 1489 aa16.03■□□□□ 0.16
SNRPD2-201ENST00000342669 PTPRKQ15262 1439 aa16.03■□□□□ 0.16
SNRPD2-201ENST00000342669 ZNF142P52746 1687 aaPredicted RBP16.03■□□□□ 0.16
SNRPD2-201ENST00000342669 LOC105371045A0A1W2PR82 267 aa16.02■□□□□ 0.16
SNRPD2-201ENST00000342669 VPS8Q8N3P4 1428 aa16.01■□□□□ 0.15
SNRPD2-201ENST00000342669 CEP170BQ9Y4F5 1589 aaPredicted RBP16■□□□□ 0.15
SNRPD2-201ENST00000342669 NCKAP5LQ9HCH0 1330 aa16■□□□□ 0.15
SNRPD2-201ENST00000342669 KIF3BO15066 747 aa16■□□□□ 0.15
SNRPD2-201ENST00000342669 LRRC9Q6ZRR7 1453 aa15.99■□□□□ 0.15
SNRPD2-201ENST00000342669 LTBP4Q8N2S1 1624 aa15.99■□□□□ 0.15
SNRPD2-201ENST00000342669 TSPY4P0CV99 314 aa15.99■□□□□ 0.15
SNRPD2-201ENST00000342669 TSPY10P0CW01 314 aa15.99■□□□□ 0.15
SNRPD2-201ENST00000342669 ARHGEF5Q12774 1597 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms