RNA–Protein interactions for RNA: ENST00000342669.7

SNRPD2-201, Transcript of small nuclear ribonucleoprotein D2 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD2-201ENST00000342669 NISCHQ9Y2I1 1504 aa25.22■■□□□ 1.63
SNRPD2-201ENST00000342669 CCDC180Q9P1Z9 1646 aa22.65■■□□□ 1.22
SNRPD2-201ENST00000342669 ABCC9O60706 1549 aa22.62■■□□□ 1.21
SNRPD2-201ENST00000342669 RB1CC1Q8TDY2 1594 aa21.56■■□□□ 1.04
SNRPD2-201ENST00000342669 NACADO15069 1562 aa21.41■■□□□ 1.02
SNRPD2-201ENST00000342669 DCAF8L2P0C7V8 631 aa21.32■■□□□ 1
SNRPD2-201ENST00000342669 DNAJC5BQ9UF47 199 aa21.19■□□□□ 0.98
SNRPD2-201ENST00000342669 UNC13AQ9UPW8 1703 aa21.09■□□□□ 0.97
SNRPD2-201ENST00000342669 MYO15BQ96JP2 1530 aa21.09■□□□□ 0.97
SNRPD2-201ENST00000342669 PABPN1Q86U42 306 aaKnown RBP eCLIP21.06■□□□□ 0.96
SNRPD2-201ENST00000342669 BICRAQ9NZM4 1560 aa20.89■□□□□ 0.94
SNRPD2-201ENST00000342669 ZCCHC6Q5VYS8 1495 aaKnown RBP20.88■□□□□ 0.93
SNRPD2-201ENST00000342669 DCAF1Q9Y4B6 1507 aa20.83■□□□□ 0.93
SNRPD2-201ENST00000342669 SHROOM4Q9ULL8 1493 aa20.63■□□□□ 0.89
SNRPD2-201ENST00000342669 SCRIBQ14160 1630 aa20.63■□□□□ 0.89
SNRPD2-201ENST00000342669 CC2D2AQ9P2K1 1620 aa20.45■□□□□ 0.86
SNRPD2-201ENST00000342669 EIF4G1Q04637 1599 aaKnown RBP20.4■□□□□ 0.86
SNRPD2-201ENST00000342669 CECR2Q9BXF3 1484 aa20.38■□□□□ 0.85
SNRPD2-201ENST00000342669 AEBP2Q6ZN18 517 aaPredicted RBP19.9■□□□□ 0.78
SNRPD2-201ENST00000342669 NCAPD3P42695 1498 aa19.74■□□□□ 0.75
SNRPD2-201ENST00000342669 ATAD2BQ9ULI0 1458 aa19.68■□□□□ 0.74
SNRPD2-201ENST00000342669 SMARCA4P51532 1647 aa19.68■□□□□ 0.74
SNRPD2-201ENST00000342669 SMARCA2P51531 1590 aa19.66■□□□□ 0.74
SNRPD2-201ENST00000342669 HMGXB3Q12766 1538 aa19.61■□□□□ 0.73
SNRPD2-201ENST00000342669 BAZ1AQ9NRL2 1556 aaPredicted RBP19.58■□□□□ 0.73
SNRPD2-201ENST00000342669 ERCC6Q03468 1493 aa19.55■□□□□ 0.72
SNRPD2-201ENST00000342669 CUX2O14529 1486 aa19.51■□□□□ 0.71
SNRPD2-201ENST00000342669 BAZ1BQ9UIG0 1483 aaKnown RBP19.51■□□□□ 0.71
SNRPD2-201ENST00000342669 DNAJC5Q9H3Z4 198 aa19.48■□□□□ 0.71
SNRPD2-201ENST00000342669 PEG3Q9GZU2 1588 aa19.48■□□□□ 0.71
SNRPD2-201ENST00000342669 MROH2BQ7Z745 1585 aa19.42■□□□□ 0.7
SNRPD2-201ENST00000342669 NESP48681 1621 aa19.42■□□□□ 0.7
SNRPD2-201ENST00000342669 LAMC3Q9Y6N6 1575 aa19.32■□□□□ 0.68
SNRPD2-201ENST00000342669 THOC2Q8NI27 1593 aaKnown RBP19.23■□□□□ 0.67
SNRPD2-201ENST00000342669 WIZO95785 1651 aa19.21■□□□□ 0.67
SNRPD2-201ENST00000342669 KIF21AQ7Z4S6 1674 aa19.21■□□□□ 0.67
SNRPD2-201ENST00000342669 PDS5BQ9NTI5 1447 aa19.21■□□□□ 0.67
SNRPD2-201ENST00000342669 CADPSQ9ULU8 1353 aa19.15■□□□□ 0.66
SNRPD2-201ENST00000342669 MRC2Q9UBG0 1479 aa19.03■□□□□ 0.64
SNRPD2-201ENST00000342669 RSF1Q96T23 1441 aaPredicted RBP19.02■□□□□ 0.64
SNRPD2-201ENST00000342669 WDR62O43379 1518 aa18.98■□□□□ 0.63
SNRPD2-201ENST00000342669 CEP164Q9UPV0 1460 aa18.97■□□□□ 0.63
SNRPD2-201ENST00000342669 TOP2AP11388 1531 aaKnown RBP18.96■□□□□ 0.63
SNRPD2-201ENST00000342669 FANCD2Q9BXW9 1451 aa18.94■□□□□ 0.62
SNRPD2-201ENST00000342669 CFTRP13569 1480 aa18.92■□□□□ 0.62
SNRPD2-201ENST00000342669 PRDM2Q13029 1718 aa18.81■□□□□ 0.6
SNRPD2-201ENST00000342669 URB2Q14146 1524 aaKnown RBP18.77■□□□□ 0.6
SNRPD2-201ENST00000342669 CCDC88BA6NC98 1476 aa18.74■□□□□ 0.59
SNRPD2-201ENST00000342669 TRIM41Q8WV44 630 aa18.66■□□□□ 0.58
SNRPD2-201ENST00000342669 OSCARQ8IYS5 282 aa18.63■□□□□ 0.57
SNRPD2-201ENST00000342669 CHIC1Q5VXU3 224 aa18.59■□□□□ 0.57
SNRPD2-201ENST00000342669 IFT140Q96RY7 1462 aa18.58■□□□□ 0.57
SNRPD2-201ENST00000342669 TOPBP1Q92547 1522 aa18.58■□□□□ 0.56
SNRPD2-201ENST00000342669 ABCC8Q09428 1581 aa18.57■□□□□ 0.56
SNRPD2-201ENST00000342669 ZNF608Q9ULD9 1512 aaPredicted RBP18.53■□□□□ 0.56
SNRPD2-201ENST00000342669 DNMBPQ6XZF7 1577 aa18.51■□□□□ 0.55
SNRPD2-201ENST00000342669 EIF4G3O43432 1585 aaKnown RBP18.45■□□□□ 0.54
SNRPD2-201ENST00000342669 TARBP1Q13395 1621 aaKnown RBP18.41■□□□□ 0.54
SNRPD2-201ENST00000342669 POLA1P09884 1462 aaPredicted RBP18.38■□□□□ 0.53
SNRPD2-201ENST00000342669 RIMBP3CA6NJZ7 1639 aa18.38■□□□□ 0.53
SNRPD2-201ENST00000342669 RIMBP3BA6NNM3 1639 aa18.38■□□□□ 0.53
SNRPD2-201ENST00000342669 RIMBP3Q9UFD9 1639 aa18.38■□□□□ 0.53
SNRPD2-201ENST00000342669 AQRO60306 1485 aaKnown RBP eCLIP18.37■□□□□ 0.53
SNRPD2-201ENST00000342669 CHD1O14646 1710 aa18.34■□□□□ 0.53
SNRPD2-201ENST00000342669 SOGA1O94964 1423 aa18.32■□□□□ 0.52
SNRPD2-201ENST00000342669 ARHGEF11O15085 1522 aa18.31■□□□□ 0.52
SNRPD2-201ENST00000342669 RAD54L2Q9Y4B4 1467 aa18.31■□□□□ 0.52
SNRPD2-201ENST00000342669 FBLN2P98095 1184 aa18.28■□□□□ 0.52
SNRPD2-201ENST00000342669 FGD5Q6ZNL6 1462 aa18.27■□□□□ 0.52
SNRPD2-201ENST00000342669 CUX1P39880 1505 aa18.26■□□□□ 0.51
SNRPD2-201ENST00000342669 TDRD9Q8NDG6 1382 aaKnown RBP18.26■□□□□ 0.51
SNRPD2-201ENST00000342669 WDR97A6NE52 1622 aa18.25■□□□□ 0.51
SNRPD2-201ENST00000342669 SUPT5HO00267 1087 aaKnown RBP18.21■□□□□ 0.51
SNRPD2-201ENST00000342669 CYB5RLQ6IPT4 315 aa18.19■□□□□ 0.5
SNRPD2-201ENST00000342669 SNAPC4Q5SXM2 1469 aa18.19■□□□□ 0.5
SNRPD2-201ENST00000342669 GRIN2BQ13224 1484 aa18.15■□□□□ 0.5
SNRPD2-201ENST00000342669 MAGI1Q96QZ7 1491 aaPredicted RBP18.15■□□□□ 0.5
SNRPD2-201ENST00000342669 CHMP7Q8WUX9 453 aaPredicted RBP18.15■□□□□ 0.5
SNRPD2-201ENST00000342669 ARAP1Q96P48 1450 aa18.12■□□□□ 0.49
SNRPD2-201ENST00000342669 SYNJ1O43426 1573 aa18.11■□□□□ 0.49
SNRPD2-201ENST00000342669 PBRM1Q86U86 1689 aa18.11■□□□□ 0.49
SNRPD2-201ENST00000342669 CLASP1Q7Z460 1538 aa18.09■□□□□ 0.49
SNRPD2-201ENST00000342669 SYNJ2O15056 1496 aa18.09■□□□□ 0.49
SNRPD2-201ENST00000342669 GAPVD1Q14C86 1478 aa18.09■□□□□ 0.49
SNRPD2-201ENST00000342669 ABCA10Q8WWZ4 1543 aa18.06■□□□□ 0.48
SNRPD2-201ENST00000342669 ABCA5Q8WWZ7 1642 aa18.04■□□□□ 0.48
SNRPD2-201ENST00000342669 WRNQ14191 1432 aaPredicted RBP eCLIP18■□□□□ 0.47
SNRPD2-201ENST00000342669 TRHP20396 242 aaPredicted RBP18■□□□□ 0.47
SNRPD2-201ENST00000342669 BIVM-ERCC5R4GMW8 1640 aa17.98■□□□□ 0.47
SNRPD2-201ENST00000342669 TOP2BQ02880 1626 aa17.98■□□□□ 0.47
SNRPD2-201ENST00000342669 GRIN2AQ12879 1464 aa17.91■□□□□ 0.46
SNRPD2-201ENST00000342669 ADAMTS12P58397 1594 aa17.91■□□□□ 0.46
SNRPD2-201ENST00000342669 FHAD1B1AJZ9 1412 aa17.86■□□□□ 0.45
SNRPD2-201ENST00000342669 ERICH3Q5RHP9 1530 aa17.85■□□□□ 0.45
SNRPD2-201ENST00000342669 CEP170Q5SW79 1584 aa17.84■□□□□ 0.45
SNRPD2-201ENST00000342669 NUP160Q12769 1436 aa17.84■□□□□ 0.45
SNRPD2-201ENST00000342669 ERCC6L2Q5T890 1561 aa17.79■□□□□ 0.44
SNRPD2-201ENST00000342669 SHROOM2Q13796 1616 aa17.77■□□□□ 0.44
SNRPD2-201ENST00000342669 JPH4Q96JJ6 628 aa17.69■□□□□ 0.42
SNRPD2-201ENST00000342669 PRG4Q92954 1404 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms