RNA–Protein interactions for RNA: ENST00000341255.3

RTL6-201, Transcript of retrotransposon Gag like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTL6, Length 5,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6-201ENST00000341255 MSNP26038 577 aaKnown RBP20.69■□□□□ 0.9
RTL6-201ENST00000341255 CCDC88BA6NC98 1476 aa20.68■□□□□ 0.9
RTL6-201ENST00000341255 CARMIL2Q6F5E8 1435 aa20.68■□□□□ 0.9
RTL6-201ENST00000341255 FGD1P98174 961 aa20.68■□□□□ 0.9
RTL6-201ENST00000341255 KTN1Q86UP2 1357 aaKnown RBP20.68■□□□□ 0.9
RTL6-201ENST00000341255 KCNJ4P48050 445 aa20.67■□□□□ 0.9
RTL6-201ENST00000341255 RCAN3Q9UKA8 241 aa20.67■□□□□ 0.9
RTL6-201ENST00000341255 GGT6Q6P531 493 aa20.67■□□□□ 0.9
RTL6-201ENST00000341255 MLECQ14165 292 aa20.67■□□□□ 0.9
RTL6-201ENST00000341255 SAFB2Q14151 953 aaKnown RBP eCLIP20.66■□□□□ 0.9
RTL6-201ENST00000341255 TCERG1O14776 1098 aaKnown RBP20.65■□□□□ 0.9
RTL6-201ENST00000341255 TAOK2Q9UL54 1235 aa20.65■□□□□ 0.9
RTL6-201ENST00000341255 FMN1Q68DA7 1419 aa20.65■□□□□ 0.9
RTL6-201ENST00000341255 FOXD1Q16676 465 aa20.64■□□□□ 0.9
RTL6-201ENST00000341255 GOLGA6L6A8MZA4 724 aa20.64■□□□□ 0.89
RTL6-201ENST00000341255 SOX12O15370 315 aa20.64■□□□□ 0.89
RTL6-201ENST00000341255 MPHOSPH9Q99550 1183 aa20.63■□□□□ 0.89
RTL6-201ENST00000341255 MROH2BQ7Z745 1585 aa20.63■□□□□ 0.89
RTL6-201ENST00000341255 RAB3GAP2Q9H2M9 1393 aa20.63■□□□□ 0.89
RTL6-201ENST00000341255 NPHP1O15259 732 aa20.62■□□□□ 0.89
RTL6-201ENST00000341255 ABCC8Q09428 1581 aa20.61■□□□□ 0.89
RTL6-201ENST00000341255 HDGFL2Q7Z4V5 671 aaPredicted RBP20.61■□□□□ 0.89
RTL6-201ENST00000341255 NUP155O75694 1391 aa20.61■□□□□ 0.89
RTL6-201ENST00000341255 CHAF1AQ13111 956 aaPredicted RBP20.6■□□□□ 0.89
RTL6-201ENST00000341255 SLKQ9H2G2 1235 aaPredicted RBP20.6■□□□□ 0.89
RTL6-201ENST00000341255 GOLGA6L4A6NEF3 574 aa20.6■□□□□ 0.89
RTL6-201ENST00000341255 IPO9Q96P70 1041 aaKnown RBP20.6■□□□□ 0.89
RTL6-201ENST00000341255 PDS5BQ9NTI5 1447 aa20.59■□□□□ 0.89
RTL6-201ENST00000341255 EFCAB2Q5VUJ9 269 aa20.59■□□□□ 0.89
RTL6-201ENST00000341255 RTF1Q92541 710 aaKnown RBP20.59■□□□□ 0.89
RTL6-201ENST00000341255 RALBP1Q15311 655 aa20.59■□□□□ 0.89
RTL6-201ENST00000341255 CFAP44Q96MT7 982 aa20.59■□□□□ 0.89
RTL6-201ENST00000341255 GZF1Q9H116 711 aaPredicted RBP20.59■□□□□ 0.89
RTL6-201ENST00000341255 STK26Q9P289 416 aa20.59■□□□□ 0.89
RTL6-201ENST00000341255 ROCK2O75116 1388 aaKnown RBP20.59■□□□□ 0.89
RTL6-201ENST00000341255 ANKRD30AQ9BXX3 1397 aa20.59■□□□□ 0.89
RTL6-201ENST00000341255 IPO8O15397 1037 aaKnown RBP20.58■□□□□ 0.88
RTL6-201ENST00000341255 SMARCA2P51531 1590 aa20.58■□□□□ 0.88
RTL6-201ENST00000341255 NAP1L2Q9ULW6 460 aaPredicted RBP20.57■□□□□ 0.88
RTL6-201ENST00000341255 TDRD9Q8NDG6 1382 aaKnown RBP20.57■□□□□ 0.88
RTL6-201ENST00000341255 NRDCO43847 1150 aa20.57■□□□□ 0.88
RTL6-201ENST00000341255 MCCP23508 829 aa20.56■□□□□ 0.88
RTL6-201ENST00000341255 GOLGA2Q08379 1002 aa20.56■□□□□ 0.88
RTL6-201ENST00000341255 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.54■□□□□ 0.88
RTL6-201ENST00000341255 U2AF1L5P0DN76 240 aaPredicted RBP20.54■□□□□ 0.88
RTL6-201ENST00000341255 U2AF1Q01081 240 aaKnown RBP eCLIP20.54■□□□□ 0.88
RTL6-201ENST00000341255 GBP4Q96PP9 640 aa20.54■□□□□ 0.88
RTL6-201ENST00000341255 CALD1Q05682 793 aaKnown RBP20.53■□□□□ 0.88
RTL6-201ENST00000341255 TRHP20396 242 aaPredicted RBP20.52■□□□□ 0.87
RTL6-201ENST00000341255 DRC7Q8IY82 874 aa20.51■□□□□ 0.87
RTL6-201ENST00000341255 RWDD1Q9H446 243 aaPredicted RBP20.51■□□□□ 0.87
RTL6-201ENST00000341255 APBB1O00213 710 aa20.5■□□□□ 0.87
RTL6-201ENST00000341255 EIF3AQ14152 1382 aaKnown RBP20.48■□□□□ 0.87
RTL6-201ENST00000341255 TULP1O00294 542 aaPredicted RBP20.48■□□□□ 0.87
RTL6-201ENST00000341255 ITPRIPQ8IWB1 547 aa20.47■□□□□ 0.87
RTL6-201ENST00000341255 PTMSP20962 102 aa20.47■□□□□ 0.87
RTL6-201ENST00000341255 L3MBTL2Q969R5 705 aa20.46■□□□□ 0.87
RTL6-201ENST00000341255 GOLGA6L3A6NEY3 463 aa20.45■□□□□ 0.86
RTL6-201ENST00000341255 RSPH4AQ5TD94 716 aa20.44■□□□□ 0.86
RTL6-201ENST00000341255 KIF3BO15066 747 aa20.44■□□□□ 0.86
RTL6-201ENST00000341255 MFAP1P55081 439 aaKnown RBP20.44■□□□□ 0.86
RTL6-201ENST00000341255 PMFBP1Q8TBY8 1022 aa20.43■□□□□ 0.86
RTL6-201ENST00000341255 ARID3AQ99856 593 aa20.42■□□□□ 0.86
RTL6-201ENST00000341255 RAPGEF2Q9Y4G8 1499 aa20.42■□□□□ 0.86
RTL6-201ENST00000341255 KIAA1211Q6ZU35 1233 aa20.41■□□□□ 0.86
RTL6-201ENST00000341255 CHMP4AQ9BY43 222 aa20.41■□□□□ 0.86
RTL6-201ENST00000341255 PAK3O75914 559 aaPredicted RBP20.41■□□□□ 0.86
RTL6-201ENST00000341255 KIAA2012Q0VF49 1180 aa20.41■□□□□ 0.86
RTL6-201ENST00000341255 NLRP13Q86W25 1043 aa20.4■□□□□ 0.86
RTL6-201ENST00000341255 HNRNPMP52272 730 aaKnown RBP eCLIP20.4■□□□□ 0.86
RTL6-201ENST00000341255 TERF2IPQ9NYB0 399 aa20.4■□□□□ 0.86
RTL6-201ENST00000341255 FHOD3Q2V2M9 1422 aa20.39■□□□□ 0.86
RTL6-201ENST00000341255 TOP2AP11388 1531 aaKnown RBP20.39■□□□□ 0.85
RTL6-201ENST00000341255 CCDC18Q5T9S5 1454 aa20.38■□□□□ 0.85
RTL6-201ENST00000341255 SPAG9O60271 1321 aaKnown RBP20.37■□□□□ 0.85
RTL6-201ENST00000341255 CADPSQ9ULU8 1353 aa20.36■□□□□ 0.85
RTL6-201ENST00000341255 PDE3BQ13370 1112 aa20.36■□□□□ 0.85
RTL6-201ENST00000341255 AMER1Q5JTC6 1135 aaPredicted RBP20.36■□□□□ 0.85
RTL6-201ENST00000341255 STK31Q9BXU1 1019 aa20.36■□□□□ 0.85
RTL6-201ENST00000341255 CCDC146Q8IYE0 955 aa20.35■□□□□ 0.85
RTL6-201ENST00000341255 CLUAP1Q96AJ1 413 aa20.35■□□□□ 0.85
RTL6-201ENST00000341255 CSB-PGBD3P0DP91 1061 aa20.34■□□□□ 0.85
RTL6-201ENST00000341255 SMC4Q9NTJ3 1288 aa20.34■□□□□ 0.85
RTL6-201ENST00000341255 SYAP1Q96A49 352 aaPredicted RBP20.33■□□□□ 0.84
RTL6-201ENST00000341255 FOXD4L1Q9NU39 408 aa20.31■□□□□ 0.84
RTL6-201ENST00000341255 WASHC2CQ9Y4E1 1318 aa20.31■□□□□ 0.84
RTL6-201ENST00000341255 DHX57Q6P158 1386 aaKnown RBP20.31■□□□□ 0.84
RTL6-201ENST00000341255 CENPJQ9HC77 1338 aaPredicted RBP20.3■□□□□ 0.84
RTL6-201ENST00000341255 USP35Q9P2H5 1018 aa20.3■□□□□ 0.84
RTL6-201ENST00000341255 GNL2Q13823 731 aaKnown RBP20.3■□□□□ 0.84
RTL6-201ENST00000341255 PHLDB1Q86UU1 1377 aa20.3■□□□□ 0.84
RTL6-201ENST00000341255 HDAC5Q9UQL6 1122 aa20.3■□□□□ 0.84
RTL6-201ENST00000341255 PDE4AP27815 886 aa20.3■□□□□ 0.84
RTL6-201ENST00000341255 HMMRO75330 724 aa20.29■□□□□ 0.84
RTL6-201ENST00000341255 JPH4Q96JJ6 628 aa20.28■□□□□ 0.84
RTL6-201ENST00000341255 WIZO95785 1651 aa20.28■□□□□ 0.84
RTL6-201ENST00000341255 SLC4A3P48751 1232 aa20.28■□□□□ 0.84
RTL6-201ENST00000341255 LMOD3Q0VAK6 560 aa20.27■□□□□ 0.84
RTL6-201ENST00000341255 ZNF330Q9Y3S2 320 aaPredicted RBP20.27■□□□□ 0.84
RTL6-201ENST00000341255 EID1Q9Y6B2 187 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms