RNA–Protein interactions for RNA: ENST00000340612.4

CCDC30-201, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-201ENST00000340612 KHSRPQ92945 711 aaKnown RBP eCLIP4.8□□□□□ -1.64
CCDC30-201ENST00000340612 CABP2Q9NPB3 220 aa4.79□□□□□ -1.64
CCDC30-201ENST00000340612 ARSIQ5FYB1 569 aa4.79□□□□□ -1.64
CCDC30-201ENST00000340612 RGL2O15211 777 aa4.78□□□□□ -1.64
CCDC30-201ENST00000340612 POTEEQ6S8J3 1075 aa4.78□□□□□ -1.64
CCDC30-201ENST00000340612 HAP1P54257 671 aaPredicted RBP4.77□□□□□ -1.65
CCDC30-201ENST00000340612 CIZ1Q9ULV3 898 aaPredicted RBP4.77□□□□□ -1.65
CCDC30-201ENST00000340612 AXIN2Q9Y2T1 843 aa4.77□□□□□ -1.65
CCDC30-201ENST00000340612 ZSWIM6Q9HCJ5 1215 aa4.76□□□□□ -1.65
CCDC30-201ENST00000340612 HCSTQ9UBK5 93 aa4.76□□□□□ -1.65
CCDC30-201ENST00000340612 ZNF316A6NFI3 1004 aaPredicted RBP4.75□□□□□ -1.65
CCDC30-201ENST00000340612 PDAP1Q13442 181 aaKnown RBP4.74□□□□□ -1.65
CCDC30-201ENST00000340612 CHRM1P11229 460 aaPredicted RBP4.72□□□□□ -1.65
CCDC30-201ENST00000340612 MICALL2Q8IY33 904 aa4.72□□□□□ -1.65
CCDC30-201ENST00000340612 GSE1Q14687 1217 aa4.71□□□□□ -1.66
CCDC30-201ENST00000340612 PAXIP1Q6ZW49 1069 aaPredicted RBP4.71□□□□□ -1.66
CCDC30-201ENST00000340612 CFAP44Q96MT7 982 aa4.71□□□□□ -1.66
CCDC30-201ENST00000340612 IRX2Q9BZI1 471 aaPredicted RBP4.71□□□□□ -1.66
CCDC30-201ENST00000340612 EFCAB3Q8N7B9 438 aa4.7□□□□□ -1.66
CCDC30-201ENST00000340612 CHGAP10645 457 aaKnown RBP4.69□□□□□ -1.66
CCDC30-201ENST00000340612 BBXQ8WY36 941 aaPredicted RBP4.69□□□□□ -1.66
CCDC30-201ENST00000340612 RNF25Q96BH1 459 aaPredicted RBP4.68□□□□□ -1.66
CCDC30-201ENST00000340612 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.68□□□□□ -1.66
CCDC30-201ENST00000340612 NUDT7P0C024 238 aa4.68□□□□□ -1.66
CCDC30-201ENST00000340612 ADGRD1Q6QNK2 874 aa4.68□□□□□ -1.66
CCDC30-201ENST00000340612 LHX6Q9UPM6 363 aa4.67□□□□□ -1.66
CCDC30-201ENST00000340612 PBX2P40425 430 aa4.66□□□□□ -1.66
CCDC30-201ENST00000340612 KCTD12Q96CX2 325 aaKnown RBP4.66□□□□□ -1.66
CCDC30-201ENST00000340612 MS4A4AQ96JQ5 239 aa4.65□□□□□ -1.66
CCDC30-201ENST00000340612 KDM2AQ9Y2K7 1162 aa4.65□□□□□ -1.66
CCDC30-201ENST00000340612 TSHZ2Q9NRE2 1034 aa4.64□□□□□ -1.67
CCDC30-201ENST00000340612 HRO43593 1189 aa4.63□□□□□ -1.67
CCDC30-201ENST00000340612 SPRYD3Q8NCJ5 442 aa4.63□□□□□ -1.67
CCDC30-201ENST00000340612 DMRTA1Q5VZB9 504 aa4.63□□□□□ -1.67
CCDC30-201ENST00000340612 VSIG10Q8N0Z9 540 aa4.62□□□□□ -1.67
CCDC30-201ENST00000340612 PTPN5P54829 565 aa4.62□□□□□ -1.67
CCDC30-201ENST00000340612 TRIM41Q8WV44 630 aa4.62□□□□□ -1.67
CCDC30-201ENST00000340612 PSEN2P49810 448 aa4.61□□□□□ -1.67
CCDC30-201ENST00000340612 ARHGAP33O14559 1287 aa4.61□□□□□ -1.67
CCDC30-201ENST00000340612 Q6ZNB5 142 aa4.61□□□□□ -1.67
CCDC30-201ENST00000340612 HS6ST3Q8IZP7 471 aa4.61□□□□□ -1.67
CCDC30-201ENST00000340612 RIOK3O14730 519 aaKnown RBP4.6□□□□□ -1.67
CCDC30-201ENST00000340612 NKX1-1Q15270 411 aaPredicted RBP4.6□□□□□ -1.67
CCDC30-201ENST00000340612 PHF8Q9UPP1 1060 aa4.6□□□□□ -1.67
CCDC30-201ENST00000340612 RGS20O76081 388 aa4.6□□□□□ -1.67
CCDC30-201ENST00000340612 A0A0G2JS52 829 aa4.59□□□□□ -1.67
CCDC30-201ENST00000340612 STK25O00506 426 aa4.59□□□□□ -1.67
CCDC30-201ENST00000340612 LCE2BO14633 110 aa4.59□□□□□ -1.68
CCDC30-201ENST00000340612 PCDHGA4Q9Y5G9 962 aa4.59□□□□□ -1.68
CCDC30-201ENST00000340612 PRKCSHP14314 528 aaPredicted RBP4.58□□□□□ -1.68
CCDC30-201ENST00000340612 BCANQ96GW7 911 aa4.58□□□□□ -1.68
CCDC30-201ENST00000340612 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.57□□□□□ -1.68
CCDC30-201ENST00000340612 ZFP91Q96JP5 570 aaPredicted RBP4.57□□□□□ -1.68
CCDC30-201ENST00000340612 C2orf72A6NCS6 295 aa4.57□□□□□ -1.68
CCDC30-201ENST00000340612 TK2O00142 265 aa4.57□□□□□ -1.68
CCDC30-201ENST00000340612 BCL11BQ9C0K0 894 aaPredicted RBP4.57□□□□□ -1.68
CCDC30-201ENST00000340612 STK24Q9Y6E0 443 aa4.56□□□□□ -1.68
CCDC30-201ENST00000340612 KIF3CO14782 793 aa4.56□□□□□ -1.68
CCDC30-201ENST00000340612 VGFO15240 615 aaPredicted RBP4.56□□□□□ -1.68
CCDC30-201ENST00000340612 IFFO2Q5TF58 517 aa4.56□□□□□ -1.68
CCDC30-201ENST00000340612 GTPBP6O43824 516 aaPredicted RBP4.55□□□□□ -1.68
CCDC30-201ENST00000340612 SOX12O15370 315 aa4.55□□□□□ -1.68
CCDC30-201ENST00000340612 STAC3Q96MF2 364 aa4.53□□□□□ -1.68
CCDC30-201ENST00000340612 TAOK2Q9UL54 1235 aa4.53□□□□□ -1.68
CCDC30-201ENST00000340612 KDM4FA0A1W2PPD8 638 aa4.52□□□□□ -1.69
CCDC30-201ENST00000340612 SLC34A2O95436 690 aa4.51□□□□□ -1.69
CCDC30-201ENST00000340612 THSD4Q6ZMP0 1018 aa4.51□□□□□ -1.69
CCDC30-201ENST00000340612 KCNK17Q96T54 332 aa4.5□□□□□ -1.69
CCDC30-201ENST00000340612 VPS9D1Q9Y2B5 631 aa4.5□□□□□ -1.69
CCDC30-201ENST00000340612 TPRNQ4KMQ1 711 aa4.49□□□□□ -1.69
CCDC30-201ENST00000340612 FBXO22Q8NEZ5 403 aa4.49□□□□□ -1.69
CCDC30-201ENST00000340612 TRAF7Q6Q0C0 670 aa4.49□□□□□ -1.69
CCDC30-201ENST00000340612 PSDA5PKW4 1024 aaPredicted RBP4.48□□□□□ -1.69
CCDC30-201ENST00000340612 NLRP6P59044 892 aa4.46□□□□□ -1.7
CCDC30-201ENST00000340612 PPP4R3BQ5MIZ7 849 aa4.46□□□□□ -1.7
CCDC30-201ENST00000340612 CADPS2Q86UW7 1296 aa4.46□□□□□ -1.7
CCDC30-201ENST00000340612 WNT2BQ93097 391 aa4.46□□□□□ -1.7
CCDC30-201ENST00000340612 BHMG1C9JSJ3 638 aaPredicted RBP4.45□□□□□ -1.7
CCDC30-201ENST00000340612 NBR1Q14596 966 aa4.45□□□□□ -1.7
CCDC30-201ENST00000340612 GFRA3O60609 400 aa4.44□□□□□ -1.7
CCDC30-201ENST00000340612 ZNF775Q96BV0 537 aaPredicted RBP4.44□□□□□ -1.7
CCDC30-201ENST00000340612 MFRPQ9BY79 579 aa4.44□□□□□ -1.7
CCDC30-201ENST00000340612 TMC2Q8TDI7 906 aa4.44□□□□□ -1.7
CCDC30-201ENST00000340612 PPP1R37O75864 691 aa4.43□□□□□ -1.7
CCDC30-201ENST00000340612 PTCD2Q8WV60 388 aaKnown RBP4.43□□□□□ -1.7
CCDC30-201ENST00000340612 GOLGA8CPA6NN73 597 aa4.42□□□□□ -1.7
CCDC30-201ENST00000340612 ITGBL1O95965 494 aaPredicted RBP4.42□□□□□ -1.7
CCDC30-201ENST00000340612 RYDENQ9NUL5 291 aaKnown RBP4.42□□□□□ -1.7
CCDC30-201ENST00000340612 ZNF787Q6DD87 383 aa4.41□□□□□ -1.7
CCDC30-201ENST00000340612 MRPL50Q8N5N7 158 aaKnown RBP4.41□□□□□ -1.7
CCDC30-201ENST00000340612 LAPTM4AQ15012 233 aa4.4□□□□□ -1.71
CCDC30-201ENST00000340612 KCNH8Q96L42 1107 aa4.4□□□□□ -1.71
CCDC30-201ENST00000340612 KCNV2Q8TDN2 545 aa4.39□□□□□ -1.71
CCDC30-201ENST00000340612 ZBED2Q9BTP6 218 aa4.39□□□□□ -1.71
CCDC30-201ENST00000340612 SLC4A5Q9BY07 1137 aa4.39□□□□□ -1.71
CCDC30-201ENST00000340612 BCAMP50895 628 aa4.38□□□□□ -1.71
CCDC30-201ENST00000340612 ZNF454Q8N9F8 522 aa4.38□□□□□ -1.71
CCDC30-201ENST00000340612 PLPP6Q8IY26 295 aa4.37□□□□□ -1.71
CCDC30-201ENST00000340612 BCL2L12Q9HB09 334 aa4.37□□□□□ -1.71
CCDC30-201ENST00000340612 WDR70Q9NW82 654 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms