RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 ABCA8O94911 1581 aa21.34■■□□□ 1.01
LIMK2-203ENST00000340552 PTPRKQ15262 1439 aa21.34■■□□□ 1.01
LIMK2-203ENST00000340552 IRX6P78412 446 aaPredicted RBP21.33■■□□□ 1.01
LIMK2-203ENST00000340552 PPP1R15AO75807 674 aaPredicted RBP21.33■■□□□ 1
LIMK2-203ENST00000340552 TCOF1Q13428 1488 aaKnown RBP21.33■■□□□ 1
LIMK2-203ENST00000340552 CCER2I3L3R5 266 aa21.32■■□□□ 1
LIMK2-203ENST00000340552 MIA2Q96PC5 1412 aa21.32■■□□□ 1
LIMK2-203ENST00000340552 NBR1Q14596 966 aa21.31■■□□□ 1
LIMK2-203ENST00000340552 SHROOM2Q13796 1616 aa21.31■■□□□ 1
LIMK2-203ENST00000340552 TROQ12816 1431 aaPredicted RBP21.31■■□□□ 1
LIMK2-203ENST00000340552 PTPRGP23470 1445 aa21.3■■□□□ 1
LIMK2-203ENST00000340552 CCDC136Q96JN2 1154 aa21.3■■□□□ 1
LIMK2-203ENST00000340552 HFM1A2PYH4 1435 aa21.26■□□□□ 0.99
LIMK2-203ENST00000340552 MAPKBP1O60336 1514 aa21.25■□□□□ 0.99
LIMK2-203ENST00000340552 ATP10BO94823 1461 aa21.25■□□□□ 0.99
LIMK2-203ENST00000340552 NOP58Q9Y2X3 529 aaKnown RBP21.25■□□□□ 0.99
LIMK2-203ENST00000340552 PAK3O75914 559 aaPredicted RBP21.23■□□□□ 0.99
LIMK2-203ENST00000340552 ADCY10Q96PN6 1610 aa21.22■□□□□ 0.99
LIMK2-203ENST00000340552 PLEKHD1A6NEE1 506 aa21.22■□□□□ 0.99
LIMK2-203ENST00000340552 ANP32CO43423 234 aa21.22■□□□□ 0.99
LIMK2-203ENST00000340552 KIF14Q15058 1648 aa21.22■□□□□ 0.99
LIMK2-203ENST00000340552 NAIPQ13075 1403 aa21.21■□□□□ 0.99
LIMK2-203ENST00000340552 CLASP1Q7Z460 1538 aa21.21■□□□□ 0.99
LIMK2-203ENST00000340552 ERCC6L2Q5T890 1561 aa21.21■□□□□ 0.99
LIMK2-203ENST00000340552 IL27Q8NEV9 243 aa21.19■□□□□ 0.98
LIMK2-203ENST00000340552 CHIC2Q9UKJ5 165 aa21.19■□□□□ 0.98
LIMK2-203ENST00000340552 ITSN2Q9NZM3 1697 aa21.17■□□□□ 0.98
LIMK2-203ENST00000340552 UACAQ9BZF9 1416 aa21.17■□□□□ 0.98
LIMK2-203ENST00000340552 ZNF644Q9H582 1327 aaPredicted RBP21.16■□□□□ 0.98
LIMK2-203ENST00000340552 RRP7BPQ9NSQ0 103 aa21.16■□□□□ 0.98
LIMK2-203ENST00000340552 GPATCH8Q9UKJ3 1502 aaKnown RBP21.16■□□□□ 0.98
LIMK2-203ENST00000340552 HIRIP3Q9BW71 556 aaPredicted RBP21.16■□□□□ 0.98
LIMK2-203ENST00000340552 UBE2Q2Q8WVN8 375 aa21.15■□□□□ 0.98
LIMK2-203ENST00000340552 CFDP1Q9UEE9 299 aaPredicted RBP21.15■□□□□ 0.98
LIMK2-203ENST00000340552 PPP4R2Q9NY27 417 aa21.14■□□□□ 0.97
LIMK2-203ENST00000340552 DAPK1P53355 1430 aa21.13■□□□□ 0.97
LIMK2-203ENST00000340552 AKNAQ7Z591 1439 aa21.13■□□□□ 0.97
LIMK2-203ENST00000340552 DNMT1P26358 1616 aaKnown RBP21.13■□□□□ 0.97
LIMK2-203ENST00000340552 GCC2Q8IWJ2 1684 aa21.12■□□□□ 0.97
LIMK2-203ENST00000340552 RTN4Q9NQC3 1192 aaKnown RBP21.12■□□□□ 0.97
LIMK2-203ENST00000340552 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.12■□□□□ 0.97
LIMK2-203ENST00000340552 ABCC5O15440 1437 aa21.11■□□□□ 0.97
LIMK2-203ENST00000340552 HNRNPUQ00839 825 aaKnown RBP eCLIP21.1■□□□□ 0.97
LIMK2-203ENST00000340552 CAMSAP2Q08AD1 1489 aa21.1■□□□□ 0.97
LIMK2-203ENST00000340552 ABCC10Q5T3U5 1492 aa21.1■□□□□ 0.97
LIMK2-203ENST00000340552 CDC42BPAQ5VT25 1732 aa21.09■□□□□ 0.97
LIMK2-203ENST00000340552 ZNF777Q9ULD5 760 aaPredicted RBP21.08■□□□□ 0.97
LIMK2-203ENST00000340552 ABCC2Q92887 1545 aa21.08■□□□□ 0.97
LIMK2-203ENST00000340552 SIN3AQ96ST3 1273 aa21.07■□□□□ 0.96
LIMK2-203ENST00000340552 ROCK1Q13464 1354 aa21.06■□□□□ 0.96
LIMK2-203ENST00000340552 B4GALNT3Q6L9W6 998 aa21.05■□□□□ 0.96
LIMK2-203ENST00000340552 RTL5Q5HYW3 569 aaPredicted RBP21.04■□□□□ 0.96
LIMK2-203ENST00000340552 KDM6BO15054 1643 aa21.04■□□□□ 0.96
LIMK2-203ENST00000340552 UHRF1BP1LA0JNW5 1464 aa20.97■□□□□ 0.95
LIMK2-203ENST00000340552 CROCC2H7BZ55 1655 aa20.97■□□□□ 0.95
LIMK2-203ENST00000340552 TIMELESSQ9UNS1 1208 aa20.96■□□□□ 0.95
LIMK2-203ENST00000340552 ADGBQ8N7X0 1667 aa20.95■□□□□ 0.94
LIMK2-203ENST00000340552 IPO9Q96P70 1041 aaKnown RBP20.95■□□□□ 0.94
LIMK2-203ENST00000340552 ZCCHC11Q5TAX3 1644 aaKnown RBP20.95■□□□□ 0.94
LIMK2-203ENST00000340552 NCOA1Q15788 1441 aa20.94■□□□□ 0.94
LIMK2-203ENST00000340552 CDC42BPBQ9Y5S2 1711 aa20.94■□□□□ 0.94
LIMK2-203ENST00000340552 PREX2Q70Z35 1606 aa20.94■□□□□ 0.94
LIMK2-203ENST00000340552 KDM5BQ9UGL1 1544 aa20.93■□□□□ 0.94
LIMK2-203ENST00000340552 ADGRL2O95490 1459 aa20.93■□□□□ 0.94
LIMK2-203ENST00000340552 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.92■□□□□ 0.94
LIMK2-203ENST00000340552 TTC37Q6PGP7 1564 aa20.92■□□□□ 0.94
LIMK2-203ENST00000340552 OSCARQ8IYS5 282 aa20.91■□□□□ 0.94
LIMK2-203ENST00000340552 DENND4BO75064 1496 aaPredicted RBP20.9■□□□□ 0.94
LIMK2-203ENST00000340552 WASHC2AQ641Q2 1341 aa20.9■□□□□ 0.94
LIMK2-203ENST00000340552 ANKRD30AQ9BXX3 1397 aa20.9■□□□□ 0.94
LIMK2-203ENST00000340552 MPHOSPH9Q99550 1183 aa20.9■□□□□ 0.94
LIMK2-203ENST00000340552 ANP32AP39687 249 aaKnown RBP20.89■□□□□ 0.93
LIMK2-203ENST00000340552 ZBTB47Q9UFB7 747 aaPredicted RBP20.89■□□□□ 0.93
LIMK2-203ENST00000340552 SAMD9LQ8IVG5 1584 aa20.88■□□□□ 0.93
LIMK2-203ENST00000340552 SHANK2Q9UPX8 1470 aa20.88■□□□□ 0.93
LIMK2-203ENST00000340552 HNRNPMP52272 730 aaKnown RBP eCLIP20.88■□□□□ 0.931e-7■■■□□ 16.7
LIMK2-203ENST00000340552 TONSLQ96HA7 1378 aa20.87■□□□□ 0.93
LIMK2-203ENST00000340552 C9orf84Q5VXU9 1444 aa20.87■□□□□ 0.93
LIMK2-203ENST00000340552 ARHGEF5Q12774 1597 aa20.87■□□□□ 0.93
LIMK2-203ENST00000340552 TSPY4P0CV99 314 aa20.86■□□□□ 0.93
LIMK2-203ENST00000340552 TSPY10P0CW01 314 aa20.86■□□□□ 0.93
LIMK2-203ENST00000340552 MBD5Q9P267 1494 aa20.86■□□□□ 0.93
LIMK2-203ENST00000340552 ARHGAP5Q13017 1502 aa20.86■□□□□ 0.93
LIMK2-203ENST00000340552 MYO5CQ9NQX4 1742 aa20.86■□□□□ 0.93
LIMK2-203ENST00000340552 CCDC141Q6ZP82 1450 aa20.82■□□□□ 0.92
LIMK2-203ENST00000340552 ANKRD50Q9ULJ7 1429 aa20.81■□□□□ 0.92
LIMK2-203ENST00000340552 RSPH4AQ5TD94 716 aa20.8■□□□□ 0.92
LIMK2-203ENST00000340552 FOXD1Q16676 465 aa20.8■□□□□ 0.92
LIMK2-203ENST00000340552 SLC4A1APQ9BWU0 796 aaKnown RBP20.8■□□□□ 0.92
LIMK2-203ENST00000340552 SYCP2Q9BX26 1530 aa20.79■□□□□ 0.92
LIMK2-203ENST00000340552 C11orf95C9JLR9 678 aaPredicted RBP20.79■□□□□ 0.92
LIMK2-203ENST00000340552 PLCH2O75038 1416 aa20.78■□□□□ 0.92
LIMK2-203ENST00000340552 CCDC184Q52MB2 194 aa20.76■□□□□ 0.91
LIMK2-203ENST00000340552 WASHC2CQ9Y4E1 1318 aa20.76■□□□□ 0.91
LIMK2-203ENST00000340552 PZPP20742 1482 aa20.76■□□□□ 0.91
LIMK2-203ENST00000340552 KIF15Q9NS87 1388 aa20.76■□□□□ 0.91
LIMK2-203ENST00000340552 PLEKHH2Q8IVE3 1493 aa20.75■□□□□ 0.91
LIMK2-203ENST00000340552 KIAA1107Q9UPP5 1409 aa20.74■□□□□ 0.91
LIMK2-203ENST00000340552 ANKRD30BQ9BXX2 1392 aa20.74■□□□□ 0.91
LIMK2-203ENST00000340552 WDR7Q9Y4E6 1490 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms