RNA–Protein interactions for RNA: ENST00000339711.8

PRDM8-201, Transcript of PR/SET domain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM8, Length 4,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM8-201ENST00000339711 SUPT6HQ7KZ85 1726 aaKnown RBP22.62■■□□□ 1.21
PRDM8-201ENST00000339711 MIA2Q96PC5 1412 aa22.62■■□□□ 1.21
PRDM8-201ENST00000339711 TROQ12816 1431 aaPredicted RBP22.61■■□□□ 1.21
PRDM8-201ENST00000339711 ADAMTS12P58397 1594 aa22.59■■□□□ 1.21
PRDM8-201ENST00000339711 HFM1A2PYH4 1435 aa22.59■■□□□ 1.21
PRDM8-201ENST00000339711 WDR62O43379 1518 aa22.59■■□□□ 1.21
PRDM8-201ENST00000339711 PLB1Q6P1J6 1458 aa22.58■■□□□ 1.21
PRDM8-201ENST00000339711 DAXXQ9UER7 740 aaPredicted RBP22.57■■□□□ 1.2
PRDM8-201ENST00000339711 HSPA5P11021 654 aaKnown RBP22.57■■□□□ 1.2
PRDM8-201ENST00000339711 CARD11Q9BXL7 1154 aa22.56■■□□□ 1.2
PRDM8-201ENST00000339711 TARBP1Q13395 1621 aaKnown RBP22.56■■□□□ 1.2
PRDM8-201ENST00000339711 HNRNPUQ00839 825 aaKnown RBP eCLIP22.55■■□□□ 1.2
PRDM8-201ENST00000339711 DCAF11Q8TEB1 546 aa22.54■■□□□ 1.2
PRDM8-201ENST00000339711 FAM9BQ8IZU0 186 aa22.53■■□□□ 1.2
PRDM8-201ENST00000339711 NAIPQ13075 1403 aa22.52■■□□□ 1.2
PRDM8-201ENST00000339711 OSCARQ8IYS5 282 aa22.5■■□□□ 1.19
PRDM8-201ENST00000339711 MRS2Q9HD23 443 aa22.49■■□□□ 1.19
PRDM8-201ENST00000339711 EIF4G3O43432 1585 aaKnown RBP22.48■■□□□ 1.19
PRDM8-201ENST00000339711 UGGT2Q9NYU1 1516 aa22.47■■□□□ 1.19
PRDM8-201ENST00000339711 THOC2Q8NI27 1593 aaKnown RBP22.46■■□□□ 1.19
PRDM8-201ENST00000339711 PBRM1Q86U86 1689 aa22.46■■□□□ 1.19
PRDM8-201ENST00000339711 SPAG9O60271 1321 aaKnown RBP22.45■■□□□ 1.18
PRDM8-201ENST00000339711 PTPN23Q9H3S7 1636 aa22.44■■□□□ 1.18
PRDM8-201ENST00000339711 DAPK1P53355 1430 aa22.43■■□□□ 1.18
PRDM8-201ENST00000339711 CFAP43Q8NDM7 1665 aa22.43■■□□□ 1.18
PRDM8-201ENST00000339711 IRX6P78412 446 aaPredicted RBP22.42■■□□□ 1.18
PRDM8-201ENST00000339711 ANKRD50Q9ULJ7 1429 aa22.42■■□□□ 1.18
PRDM8-201ENST00000339711 KIF15Q9NS87 1388 aa22.42■■□□□ 1.18
PRDM8-201ENST00000339711 PTPRKQ15262 1439 aa22.4■■□□□ 1.18
PRDM8-201ENST00000339711 NUP153P49790 1475 aaKnown RBP22.39■■□□□ 1.18
PRDM8-201ENST00000339711 SAMD9Q5K651 1589 aa22.39■■□□□ 1.18
PRDM8-201ENST00000339711 TMC1Q8TDI8 760 aa22.39■■□□□ 1.18
PRDM8-201ENST00000339711 RTL5Q5HYW3 569 aaPredicted RBP22.39■■□□□ 1.17
PRDM8-201ENST00000339711 SENP3-EIF4A1A0A087X0R7 540 aa22.37■■□□□ 1.17
PRDM8-201ENST00000339711 KANK1Q14678 1352 aa22.36■■□□□ 1.17
PRDM8-201ENST00000339711 KIAA0556O60303 1618 aa22.36■■□□□ 1.17
PRDM8-201ENST00000339711 ESF1Q9H501 851 aaKnown RBP22.36■■□□□ 1.17
PRDM8-201ENST00000339711 STAG3Q9UJ98 1225 aa22.36■■□□□ 1.17
PRDM8-201ENST00000339711 SALL2Q9Y467 1007 aaPredicted RBP22.36■■□□□ 1.17
PRDM8-201ENST00000339711 KIF3BO15066 747 aa22.35■■□□□ 1.17
PRDM8-201ENST00000339711 DISP1Q96F81 1524 aa22.35■■□□□ 1.17
PRDM8-201ENST00000339711 ABCC5O15440 1437 aa22.35■■□□□ 1.17
PRDM8-201ENST00000339711 ROCK1Q13464 1354 aa22.33■■□□□ 1.17
PRDM8-201ENST00000339711 CCER2I3L3R5 266 aa22.33■■□□□ 1.17
PRDM8-201ENST00000339711 RAPGEF6Q8TEU7 1601 aa22.33■■□□□ 1.17
PRDM8-201ENST00000339711 WDR97A6NE52 1622 aa22.32■■□□□ 1.16
PRDM8-201ENST00000339711 ARHGEF11O15085 1522 aa22.32■■□□□ 1.16
PRDM8-201ENST00000339711 C9orf84Q5VXU9 1444 aa22.31■■□□□ 1.16
PRDM8-201ENST00000339711 NUP160Q12769 1436 aa22.31■■□□□ 1.16
PRDM8-201ENST00000339711 GGT6Q6P531 493 aa22.31■■□□□ 1.16
PRDM8-201ENST00000339711 ARHGAP5Q13017 1502 aa22.3■■□□□ 1.16
PRDM8-201ENST00000339711 CAMSAP2Q08AD1 1489 aa22.28■■□□□ 1.16
PRDM8-201ENST00000339711 AFAP1Q8N556 730 aa22.26■■□□□ 1.15
PRDM8-201ENST00000339711 ATP10BO94823 1461 aa22.26■■□□□ 1.15
PRDM8-201ENST00000339711 CCDC144AA2RUR9 1427 aa22.25■■□□□ 1.15
PRDM8-201ENST00000339711 GPATCH8Q9UKJ3 1502 aaKnown RBP22.25■■□□□ 1.15
PRDM8-201ENST00000339711 ROCK2O75116 1388 aaKnown RBP22.24■■□□□ 1.15
PRDM8-201ENST00000339711 CYB5RLQ6IPT4 315 aa22.24■■□□□ 1.15
PRDM8-201ENST00000339711 MAPKBP1O60336 1514 aa22.24■■□□□ 1.15
PRDM8-201ENST00000339711 SENP3Q9H4L4 574 aaPredicted RBP22.24■■□□□ 1.15
PRDM8-201ENST00000339711 AKNAQ7Z591 1439 aa22.23■■□□□ 1.15
PRDM8-201ENST00000339711 NPM2Q86SE8 214 aaKnown RBP22.22■■□□□ 1.15
PRDM8-201ENST00000339711 NCOA1Q15788 1441 aa22.22■■□□□ 1.15
PRDM8-201ENST00000339711 KIF14Q15058 1648 aa22.2■■□□□ 1.14
PRDM8-201ENST00000339711 CEP170Q5SW79 1584 aa22.19■■□□□ 1.14
PRDM8-201ENST00000339711 TCOF1Q13428 1488 aaKnown RBP22.18■■□□□ 1.14
PRDM8-201ENST00000339711 KIAA1107Q9UPP5 1409 aa22.18■■□□□ 1.14
PRDM8-201ENST00000339711 MAGI3Q5TCQ9 1506 aa22.18■■□□□ 1.14
PRDM8-201ENST00000339711 CDCA8Q53HL2 280 aa22.17■■□□□ 1.14
PRDM8-201ENST00000339711 BCL11AQ9H165 835 aa22.16■■□□□ 1.14
PRDM8-201ENST00000339711 NBPF8Q3BBV2 869 aa22.16■■□□□ 1.14
PRDM8-201ENST00000339711 ST20-MTHFSA0A0A6YYL1 179 aa22.16■■□□□ 1.14
PRDM8-201ENST00000339711 TMF1P82094 1093 aa22.16■■□□□ 1.14
PRDM8-201ENST00000339711 USP47Q96K76 1375 aa22.14■■□□□ 1.14
PRDM8-201ENST00000339711 PLEKHH2Q8IVE3 1493 aa22.14■■□□□ 1.13
PRDM8-201ENST00000339711 ANKRD30BQ9BXX2 1392 aa22.14■■□□□ 1.13
PRDM8-201ENST00000339711 PLPPR3Q6T4P5 718 aa22.12■■□□□ 1.13
PRDM8-201ENST00000339711 CCDC141Q6ZP82 1450 aa22.12■■□□□ 1.13
PRDM8-201ENST00000339711 KNSTRNQ9Y448 316 aa22.11■■□□□ 1.13
PRDM8-201ENST00000339711 WASHC2AQ641Q2 1341 aa22.1■■□□□ 1.13
PRDM8-201ENST00000339711 WASHC2CQ9Y4E1 1318 aa22.08■■□□□ 1.13
PRDM8-201ENST00000339711 CC2D1BQ5T0F9 858 aaKnown RBP22.06■■□□□ 1.12
PRDM8-201ENST00000339711 WDR43Q15061 677 aaKnown RBP eCLIP22.05■■□□□ 1.12
PRDM8-201ENST00000339711 CCDC7Q96M83 1385 aa22.05■■□□□ 1.12
PRDM8-201ENST00000339711 MLECQ14165 292 aa22.05■■□□□ 1.12
PRDM8-201ENST00000339711 ARID4BQ4LE39 1312 aaPredicted RBP22.04■■□□□ 1.12
PRDM8-201ENST00000339711 SUPT16HQ9Y5B9 1047 aaKnown RBP22.04■■□□□ 1.12
PRDM8-201ENST00000339711 KIF7Q2M1P5 1343 aa22.04■■□□□ 1.12
PRDM8-201ENST00000339711 PRKRIP1Q9H875 184 aaPredicted RBP22.03■■□□□ 1.12
PRDM8-201ENST00000339711 SCAPERQ9BY12 1400 aa22.01■■□□□ 1.11
PRDM8-201ENST00000339711 ANP32AP39687 249 aaKnown RBP22.01■■□□□ 1.11
PRDM8-201ENST00000339711 ITSN2Q9NZM3 1697 aa22■■□□□ 1.11
PRDM8-201ENST00000339711 NBR1Q14596 966 aa22■■□□□ 1.11
PRDM8-201ENST00000339711 SLC24A1O60721 1099 aa21.99■■□□□ 1.11
PRDM8-201ENST00000339711 CCDC136Q96JN2 1154 aa21.98■■□□□ 1.11
PRDM8-201ENST00000339711 RPRD2Q5VT52 1461 aaKnown RBP21.97■■□□□ 1.11
PRDM8-201ENST00000339711 FAM69CQ0P6D2 419 aa21.95■■□□□ 1.1
PRDM8-201ENST00000339711 CANXP27824 592 aaKnown RBP21.94■■□□□ 1.1
PRDM8-201ENST00000339711 KTN1Q86UP2 1357 aaKnown RBP21.93■■□□□ 1.1
PRDM8-201ENST00000339711 RALBP1Q15311 655 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms