RNA–Protein interactions for RNA: ENST00000338946.10

PHF8-203, Transcript of PHD finger protein 8, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PHF8, Length 4,651 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8-203ENST00000338946 MYH16Q9H6N6 1097 aa20.71■□□□□ 0.91
PHF8-203ENST00000338946 UPF2Q9HAU5 1272 aaKnown RBP20.71■□□□□ 0.91
PHF8-203ENST00000338946 EID1Q9Y6B2 187 aa20.71■□□□□ 0.91
PHF8-203ENST00000338946 ANP32AP39687 249 aaKnown RBP20.71■□□□□ 0.91
PHF8-203ENST00000338946 MYT1Q01538 1121 aa20.7■□□□□ 0.9
PHF8-203ENST00000338946 U2SURPO15042 1029 aaKnown RBP20.69■□□□□ 0.9
PHF8-203ENST00000338946 GRIN2BQ13224 1484 aa20.69■□□□□ 0.9
PHF8-203ENST00000338946 MRC2Q9UBG0 1479 aa20.67■□□□□ 0.9
PHF8-203ENST00000338946 HSP90AA1P07900 732 aaKnown RBP20.65■□□□□ 0.9
PHF8-203ENST00000338946 DNAJC5BQ9UF47 199 aa20.64■□□□□ 0.9
PHF8-203ENST00000338946 LAS1LQ9Y4W2 734 aaKnown RBP20.64■□□□□ 0.9
PHF8-203ENST00000338946 HMGXB3Q12766 1538 aa20.64■□□□□ 0.89
PHF8-203ENST00000338946 HDGFL2Q7Z4V5 671 aaPredicted RBP20.63■□□□□ 0.89
PHF8-203ENST00000338946 NUTM2DQ5VT03 806 aaPredicted RBP20.62■□□□□ 0.89
PHF8-203ENST00000338946 MORC1Q86VD1 984 aa20.62■□□□□ 0.89
PHF8-203ENST00000338946 ROCK2O75116 1388 aaKnown RBP20.61■□□□□ 0.89
PHF8-203ENST00000338946 HSPA5P11021 654 aaKnown RBP20.61■□□□□ 0.89
PHF8-203ENST00000338946 IRX6P78412 446 aaPredicted RBP20.6■□□□□ 0.89
PHF8-203ENST00000338946 PAK3O75914 559 aaPredicted RBP20.6■□□□□ 0.89
PHF8-203ENST00000338946 IFT140Q96RY7 1462 aa20.58■□□□□ 0.88
PHF8-203ENST00000338946 PNNQ9H307 717 aaKnown RBP20.57■□□□□ 0.88
PHF8-203ENST00000338946 L3MBTL2Q969R5 705 aa20.56■□□□□ 0.88
PHF8-203ENST00000338946 TOPBP1Q92547 1522 aa20.54■□□□□ 0.88
PHF8-203ENST00000338946 PRG4Q92954 1404 aaPredicted RBP20.51■□□□□ 0.87
PHF8-203ENST00000338946 FTSJ3Q8IY81 847 aaKnown RBP20.51■□□□□ 0.87
PHF8-203ENST00000338946 EIF3AQ14152 1382 aaKnown RBP20.5■□□□□ 0.87
PHF8-203ENST00000338946 POLA1P09884 1462 aaPredicted RBP20.49■□□□□ 0.87
PHF8-203ENST00000338946 CCDC144AA2RUR9 1427 aa20.48■□□□□ 0.87
PHF8-203ENST00000338946 NPHP1O15259 732 aa20.47■□□□□ 0.87
PHF8-203ENST00000338946 BICRAQ9NZM4 1560 aa20.47■□□□□ 0.87
PHF8-203ENST00000338946 NGDNQ8NEJ9 315 aaKnown RBP20.46■□□□□ 0.87
PHF8-203ENST00000338946 CSB-PGBD3P0DP91 1061 aa20.46■□□□□ 0.87
PHF8-203ENST00000338946 TRAK1Q9UPV9 953 aa20.46■□□□□ 0.87
PHF8-203ENST00000338946 ZNF644Q9H582 1327 aaPredicted RBP20.46■□□□□ 0.87
PHF8-203ENST00000338946 MYOM3Q5VTT5 1437 aa20.45■□□□□ 0.86
PHF8-203ENST00000338946 VGFO15240 615 aaPredicted RBP20.45■□□□□ 0.86
PHF8-203ENST00000338946 NUTM2FA1L443 756 aa20.45■□□□□ 0.86
PHF8-203ENST00000338946 TERF2IPQ9NYB0 399 aa20.45■□□□□ 0.86
PHF8-203ENST00000338946 FRAT1Q92837 279 aaPredicted RBP20.43■□□□□ 0.86
PHF8-203ENST00000338946 KTN1Q86UP2 1357 aaKnown RBP20.42■□□□□ 0.86
PHF8-203ENST00000338946 SYNJ1O43426 1573 aa20.41■□□□□ 0.86
PHF8-203ENST00000338946 RTF1Q92541 710 aaKnown RBP20.41■□□□□ 0.86
PHF8-203ENST00000338946 SYNJ2O15056 1496 aa20.4■□□□□ 0.86
PHF8-203ENST00000338946 SNAPC4Q5SXM2 1469 aa20.4■□□□□ 0.86
PHF8-203ENST00000338946 PRDM2Q13029 1718 aa20.39■□□□□ 0.85
PHF8-203ENST00000338946 AFAP1Q8N556 730 aa20.38■□□□□ 0.85
PHF8-203ENST00000338946 U2AF1L5P0DN76 240 aaPredicted RBP20.38■□□□□ 0.85
PHF8-203ENST00000338946 U2AF1Q01081 240 aaKnown RBP eCLIP20.38■□□□□ 0.858e-15■■■□□ 17.6
PHF8-203ENST00000338946 UACAQ9BZF9 1416 aa20.38■□□□□ 0.85
PHF8-203ENST00000338946 KIF15Q9NS87 1388 aa20.38■□□□□ 0.85
PHF8-203ENST00000338946 CUX1P39880 1505 aa20.37■□□□□ 0.85
PHF8-203ENST00000338946 SUPT16HQ9Y5B9 1047 aaKnown RBP20.36■□□□□ 0.85
PHF8-203ENST00000338946 FGD6Q6ZV73 1430 aa20.35■□□□□ 0.85
PHF8-203ENST00000338946 CASKIN1Q8WXD9 1431 aa20.35■□□□□ 0.85
PHF8-203ENST00000338946 CCDC9Q9Y3X0 531 aaKnown RBP20.35■□□□□ 0.85
PHF8-203ENST00000338946 DNMBPQ6XZF7 1577 aa20.33■□□□□ 0.85
PHF8-203ENST00000338946 MS4A1P11836 297 aa20.32■□□□□ 0.84
PHF8-203ENST00000338946 CHMP4BQ9H444 224 aaKnown RBP20.32■□□□□ 0.84
PHF8-203ENST00000338946 LAMC3Q9Y6N6 1575 aa20.31■□□□□ 0.84
PHF8-203ENST00000338946 ST20-MTHFSA0A0A6YYL1 179 aa20.3■□□□□ 0.84
PHF8-203ENST00000338946 RALBP1Q15311 655 aa20.3■□□□□ 0.84
PHF8-203ENST00000338946 ERICH3Q5RHP9 1530 aa20.3■□□□□ 0.84
PHF8-203ENST00000338946 KIF21BO75037 1637 aa20.3■□□□□ 0.84
PHF8-203ENST00000338946 TOP2BQ02880 1626 aa20.3■□□□□ 0.84
PHF8-203ENST00000338946 AEBP2Q6ZN18 517 aaPredicted RBP20.29■□□□□ 0.84
PHF8-203ENST00000338946 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.29■□□□□ 0.843e-6■■■■□ 21.2
PHF8-203ENST00000338946 CCER2I3L3R5 266 aa20.28■□□□□ 0.84
PHF8-203ENST00000338946 PHLDB1Q86UU1 1377 aa20.28■□□□□ 0.84
PHF8-203ENST00000338946 AMPHP49418 695 aa20.27■□□□□ 0.84
PHF8-203ENST00000338946 LRRC9Q6ZRR7 1453 aa20.27■□□□□ 0.84
PHF8-203ENST00000338946 ARHGAP5Q13017 1502 aa20.27■□□□□ 0.84
PHF8-203ENST00000338946 OS9Q13438 667 aaPredicted RBP20.27■□□□□ 0.83
PHF8-203ENST00000338946 NCOA2Q15596 1464 aa20.26■□□□□ 0.83
PHF8-203ENST00000338946 PRXQ9BXM0 1461 aa20.25■□□□□ 0.83
PHF8-203ENST00000338946 ANKRD50Q9ULJ7 1429 aa20.25■□□□□ 0.83
PHF8-203ENST00000338946 DHX57Q6P158 1386 aaKnown RBP20.25■□□□□ 0.83
PHF8-203ENST00000338946 MINK1Q8N4C8 1332 aaPredicted RBP20.24■□□□□ 0.83
PHF8-203ENST00000338946 FYCO1Q9BQS8 1478 aa20.24■□□□□ 0.83
PHF8-203ENST00000338946 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.24■□□□□ 0.83
PHF8-203ENST00000338946 ARAP1Q96P48 1450 aa20.23■□□□□ 0.83
PHF8-203ENST00000338946 CALD1Q05682 793 aaKnown RBP20.23■□□□□ 0.83
PHF8-203ENST00000338946 LTV1Q96GA3 475 aaPredicted RBP20.23■□□□□ 0.83
PHF8-203ENST00000338946 EVC2Q86UK5 1308 aa20.22■□□□□ 0.83
PHF8-203ENST00000338946 ZNF330Q9Y3S2 320 aaPredicted RBP20.2■□□□□ 0.82
PHF8-203ENST00000338946 KIAA0586Q9BVV6 1533 aa20.19■□□□□ 0.82
PHF8-203ENST00000338946 CASC1Q6TDU7 716 aa20.19■□□□□ 0.82
PHF8-203ENST00000338946 ANP32BQ92688 251 aaKnown RBP20.18■□□□□ 0.82
PHF8-203ENST00000338946 ABCA10Q8WWZ4 1543 aa20.18■□□□□ 0.82
PHF8-203ENST00000338946 NLRP13Q86W25 1043 aa20.18■□□□□ 0.82
PHF8-203ENST00000338946 EFCAB5A4FU69 1503 aa20.18■□□□□ 0.82
PHF8-203ENST00000338946 GOLGA2Q08379 1002 aa20.16■□□□□ 0.82
PHF8-203ENST00000338946 TROQ12816 1431 aaPredicted RBP20.16■□□□□ 0.82
PHF8-203ENST00000338946 RAPGEF3O95398 923 aa20.15■□□□□ 0.82
PHF8-203ENST00000338946 RGS3P49796 1198 aa20.15■□□□□ 0.82
PHF8-203ENST00000338946 PANK3Q9H999 370 aa20.15■□□□□ 0.82
PHF8-203ENST00000338946 CHMP4AQ9BY43 222 aa20.15■□□□□ 0.82
PHF8-203ENST00000338946 COG3Q96JB2 828 aa20.14■□□□□ 0.82
PHF8-203ENST00000338946 SCAPERQ9BY12 1400 aa20.14■□□□□ 0.81
PHF8-203ENST00000338946 STAC3Q96MF2 364 aa20.14■□□□□ 0.81
PHF8-203ENST00000338946 IPO8O15397 1037 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 252.3 ms