RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 HRCP23327 699 aa21.95■■□□□ 1.1
CBX3-201ENST00000337620 CHIC2Q9UKJ5 165 aa21.93■■□□□ 1.1
CBX3-201ENST00000337620 PREX2Q70Z35 1606 aa21.92■■□□□ 1.1
CBX3-201ENST00000337620 CDC42BPBQ9Y5S2 1711 aa21.91■■□□□ 1.1
CBX3-201ENST00000337620 SETD5Q9C0A6 1442 aa21.9■■□□□ 1.1
CBX3-201ENST00000337620 MYO5CQ9NQX4 1742 aa21.9■■□□□ 1.1
CBX3-201ENST00000337620 ARHGAP5Q13017 1502 aa21.9■■□□□ 1.1
CBX3-201ENST00000337620 DAPK1P53355 1430 aa21.89■■□□□ 1.1
CBX3-201ENST00000337620 RAB3GAP2Q9H2M9 1393 aa21.88■■□□□ 1.09
CBX3-201ENST00000337620 ABCC5O15440 1437 aa21.88■■□□□ 1.09
CBX3-201ENST00000337620 DNMT1P26358 1616 aaKnown RBP21.88■■□□□ 1.09
CBX3-201ENST00000337620 PLCH2O75038 1416 aa21.87■■□□□ 1.09
CBX3-201ENST00000337620 RRP7BPQ9NSQ0 103 aa21.85■■□□□ 1.09
CBX3-201ENST00000337620 HNRNPMP52272 730 aaKnown RBP eCLIP21.85■■□□□ 1.099e-8■□□□□ 11.2
CBX3-201ENST00000337620 SAMD9LQ8IVG5 1584 aa21.84■■□□□ 1.09
CBX3-201ENST00000337620 EFCAB2Q5VUJ9 269 aa21.83■■□□□ 1.09
CBX3-201ENST00000337620 HFM1A2PYH4 1435 aa21.83■■□□□ 1.08
CBX3-201ENST00000337620 ABCA9Q8IUA7 1624 aa21.82■■□□□ 1.08
CBX3-201ENST00000337620 NAIPQ13075 1403 aa21.8■■□□□ 1.08
CBX3-201ENST00000337620 MAPKBP1O60336 1514 aa21.8■■□□□ 1.08
CBX3-201ENST00000337620 ZEB1P37275 1124 aaPredicted RBP21.79■■□□□ 1.08
CBX3-201ENST00000337620 AKNAQ7Z591 1439 aa21.79■■□□□ 1.08
CBX3-201ENST00000337620 TSPY4P0CV99 314 aa21.77■■□□□ 1.08
CBX3-201ENST00000337620 TSPY10P0CW01 314 aa21.77■■□□□ 1.08
CBX3-201ENST00000337620 MBD5Q9P267 1494 aa21.77■■□□□ 1.08
CBX3-201ENST00000337620 ROCK1Q13464 1354 aa21.76■■□□□ 1.07
CBX3-201ENST00000337620 ARAP3Q8WWN8 1544 aa21.76■■□□□ 1.07
CBX3-201ENST00000337620 SYCP2Q9BX26 1530 aa21.76■■□□□ 1.07
CBX3-201ENST00000337620 PLEKHH2Q8IVE3 1493 aa21.76■■□□□ 1.07
CBX3-201ENST00000337620 RSPH4AQ5TD94 716 aa21.76■■□□□ 1.07
CBX3-201ENST00000337620 CROCC2H7BZ55 1655 aa21.75■■□□□ 1.07
CBX3-201ENST00000337620 ARHGEF5Q12774 1597 aa21.75■■□□□ 1.07
CBX3-201ENST00000337620 DHX57Q6P158 1386 aaKnown RBP21.75■■□□□ 1.07
CBX3-201ENST00000337620 KIAA1107Q9UPP5 1409 aa21.74■■□□□ 1.07
CBX3-201ENST00000337620 CD109Q6YHK3 1445 aa21.73■■□□□ 1.07
CBX3-201ENST00000337620 CCDC141Q6ZP82 1450 aa21.73■■□□□ 1.07
CBX3-201ENST00000337620 FANCAO15360 1455 aa21.73■■□□□ 1.07
CBX3-201ENST00000337620 C9orf84Q5VXU9 1444 aa21.72■■□□□ 1.07
CBX3-201ENST00000337620 GCC2Q8IWJ2 1684 aa21.72■■□□□ 1.07
CBX3-201ENST00000337620 NCOA1Q15788 1441 aa21.71■■□□□ 1.07
CBX3-201ENST00000337620 ANKRD30AQ9BXX3 1397 aa21.71■■□□□ 1.07
CBX3-201ENST00000337620 ARHGEF12Q9NZN5 1544 aa21.71■■□□□ 1.07
CBX3-201ENST00000337620 SHANK2Q9UPX8 1470 aa21.71■■□□□ 1.07
CBX3-201ENST00000337620 ADGBQ8N7X0 1667 aa21.7■■□□□ 1.06
CBX3-201ENST00000337620 ABCC1P33527 1531 aa21.69■■□□□ 1.06
CBX3-201ENST00000337620 ADGRL2O95490 1459 aa21.69■■□□□ 1.06
CBX3-201ENST00000337620 KDM6BO15054 1643 aa21.66■■□□□ 1.06
CBX3-201ENST00000337620 FAM69CQ0P6D2 419 aa21.65■■□□□ 1.06
CBX3-201ENST00000337620 TRAPPC8Q9Y2L5 1435 aa21.65■■□□□ 1.06
CBX3-201ENST00000337620 ADGRL1O94910 1474 aa21.64■■□□□ 1.05
CBX3-201ENST00000337620 TRIM52Q96A61 297 aa21.63■■□□□ 1.05
CBX3-201ENST00000337620 AFAP1Q8N556 730 aa21.62■■□□□ 1.05
CBX3-201ENST00000337620 SCAPERQ9BY12 1400 aa21.62■■□□□ 1.05
CBX3-201ENST00000337620 GLI2P10070 1586 aa21.61■■□□□ 1.05
CBX3-201ENST00000337620 CLSPNQ9HAW4 1339 aa21.61■■□□□ 1.05
CBX3-201ENST00000337620 KIF15Q9NS87 1388 aa21.6■■□□□ 1.05
CBX3-201ENST00000337620 DIP2BQ9P265 1576 aa21.6■■□□□ 1.05
CBX3-201ENST00000337620 MAST1Q9Y2H9 1570 aa21.6■■□□□ 1.05
CBX3-201ENST00000337620 MAP3K4Q9Y6R4 1608 aa21.59■■□□□ 1.05
CBX3-201ENST00000337620 CFAP74Q9C0B2 1584 aa21.59■■□□□ 1.05
CBX3-201ENST00000337620 ANKRD50Q9ULJ7 1429 aa21.58■■□□□ 1.05
CBX3-201ENST00000337620 SPAG9O60271 1321 aaKnown RBP21.58■■□□□ 1.04
CBX3-201ENST00000337620 ACIN1Q9UKV3 1341 aaKnown RBP21.55■■□□□ 1.04
CBX3-201ENST00000337620 MYT1LQ9UL68 1186 aa21.55■■□□□ 1.04
CBX3-201ENST00000337620 NEO1Q92859 1461 aa21.54■■□□□ 1.04
CBX3-201ENST00000337620 DNAJC5Q9H3Z4 198 aa21.52■■□□□ 1.04
CBX3-201ENST00000337620 PLXNC1O60486 1568 aa21.51■■□□□ 1.03
CBX3-201ENST00000337620 RTEL1-TNFRSF6BF6WH68 1400 aa21.51■■□□□ 1.03
CBX3-201ENST00000337620 MPHOSPH9Q99550 1183 aa21.5■■□□□ 1.03
CBX3-201ENST00000337620 TSPOAP1O95153 1857 aa21.49■■□□□ 1.03
CBX3-201ENST00000337620 ZNF518AQ6AHZ1 1483 aa21.49■■□□□ 1.03
CBX3-201ENST00000337620 ZFYVE16Q7Z3T8 1539 aa21.48■■□□□ 1.03
CBX3-201ENST00000337620 POGZQ7Z3K3 1410 aa21.47■■□□□ 1.03
CBX3-201ENST00000337620 ATP7AQ04656 1500 aa21.47■■□□□ 1.03
CBX3-201ENST00000337620 DUOX2Q9NRD8 1548 aa21.47■■□□□ 1.03
CBX3-201ENST00000337620 SLC4A1APQ9BWU0 796 aaKnown RBP21.46■■□□□ 1.03
CBX3-201ENST00000337620 KIF13AQ9H1H9 1805 aa21.46■■□□□ 1.03
CBX3-201ENST00000337620 RAPGEF3O95398 923 aa21.46■■□□□ 1.03
CBX3-201ENST00000337620 DENND4BO75064 1496 aaPredicted RBP21.45■■□□□ 1.02
CBX3-201ENST00000337620 INO80Q9ULG1 1556 aaPredicted RBP21.44■■□□□ 1.02
CBX3-201ENST00000337620 SIN3AQ96ST3 1273 aa21.44■■□□□ 1.02
CBX3-201ENST00000337620 NEUROD1Q13562 356 aa21.43■■□□□ 1.02
CBX3-201ENST00000337620 NUP155O75694 1391 aa21.43■■□□□ 1.02
CBX3-201ENST00000337620 TEX14Q8IWB6 1497 aa21.43■■□□□ 1.02
CBX3-201ENST00000337620 PPRC1Q5VV67 1664 aaKnown RBP21.42■■□□□ 1.02
CBX3-201ENST00000337620 ERBINQ96RT1 1412 aa21.41■■□□□ 1.02
CBX3-201ENST00000337620 FOXD1Q16676 465 aa21.41■■□□□ 1.02
CBX3-201ENST00000337620 KDM5CP41229 1560 aa21.41■■□□□ 1.02
CBX3-201ENST00000337620 PZPP20742 1482 aa21.4■■□□□ 1.02
CBX3-201ENST00000337620 KIDINS220Q9ULH0 1771 aa21.39■■□□□ 1.02
CBX3-201ENST00000337620 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.39■■□□□ 1.011e-10■■■■□ 21.8
CBX3-201ENST00000337620 MLH3Q9UHC1 1453 aa21.37■■□□□ 1.01
CBX3-201ENST00000337620 HECW2Q9P2P5 1572 aa21.36■■□□□ 1.01
CBX3-201ENST00000337620 RICTORQ6R327 1708 aa21.35■■□□□ 1.01
CBX3-201ENST00000337620 PKD2Q13563 968 aa21.35■■□□□ 1.01
CBX3-201ENST00000337620 DHX29Q7Z478 1369 aaKnown RBP21.35■■□□□ 1.01
CBX3-201ENST00000337620 KDM5DQ9BY66 1539 aa21.34■■□□□ 1.01
CBX3-201ENST00000337620 UNC13BO14795 1591 aa21.33■■□□□ 1
CBX3-201ENST00000337620 TRHP20396 242 aaPredicted RBP21.32■■□□□ 1
CBX3-201ENST00000337620 KIF3BO15066 747 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms