RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 CCER2I3L3R5 266 aa13.47□□□□□ -0.25
MSL3-202ENST00000337339 PKD2Q13563 968 aa13.47□□□□□ -0.25
MSL3-202ENST00000337339 TSPY4P0CV99 314 aa13.46□□□□□ -0.25
MSL3-202ENST00000337339 TSPY10P0CW01 314 aa13.46□□□□□ -0.25
MSL3-202ENST00000337339 UGGT2Q9NYU1 1516 aa13.46□□□□□ -0.25
MSL3-202ENST00000337339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.46□□□□□ -0.26
MSL3-202ENST00000337339 NBPF8Q3BBV2 869 aa13.45□□□□□ -0.26
MSL3-202ENST00000337339 HECW1Q76N89 1606 aa13.45□□□□□ -0.26
MSL3-202ENST00000337339 HNRNPMP52272 730 aaKnown RBP eCLIP13.45□□□□□ -0.26
MSL3-202ENST00000337339 PLB1Q6P1J6 1458 aa13.44□□□□□ -0.26
MSL3-202ENST00000337339 MRS2Q9HD23 443 aa13.44□□□□□ -0.26
MSL3-202ENST00000337339 C11orf95C9JLR9 678 aaPredicted RBP13.44□□□□□ -0.26
MSL3-202ENST00000337339 KIAA0586Q9BVV6 1533 aa13.44□□□□□ -0.26
MSL3-202ENST00000337339 ADAMTS12P58397 1594 aa13.42□□□□□ -0.26
MSL3-202ENST00000337339 CCDC184Q52MB2 194 aa13.42□□□□□ -0.26
MSL3-202ENST00000337339 GRIN2AQ12879 1464 aa13.41□□□□□ -0.26
MSL3-202ENST00000337339 LRRIQ1Q96JM4 1722 aa13.41□□□□□ -0.26
MSL3-202ENST00000337339 MIA2Q96PC5 1412 aa13.41□□□□□ -0.26
MSL3-202ENST00000337339 RGL3Q3MIN7 710 aa13.41□□□□□ -0.26
MSL3-202ENST00000337339 DAPK1P53355 1430 aa13.41□□□□□ -0.26
MSL3-202ENST00000337339 CARMIL2Q6F5E8 1435 aa13.41□□□□□ -0.26
MSL3-202ENST00000337339 ABCC5O15440 1437 aa13.4□□□□□ -0.26
MSL3-202ENST00000337339 NUP153P49790 1475 aaKnown RBP13.39□□□□□ -0.27
MSL3-202ENST00000337339 PBRM1Q86U86 1689 aa13.39□□□□□ -0.27
MSL3-202ENST00000337339 DISP1Q96F81 1524 aa13.38□□□□□ -0.27
MSL3-202ENST00000337339 NUP155O75694 1391 aa13.38□□□□□ -0.27
MSL3-202ENST00000337339 MYT1LQ9UL68 1186 aa13.38□□□□□ -0.27
MSL3-202ENST00000337339 KDM6BO15054 1643 aa13.38□□□□□ -0.27
MSL3-202ENST00000337339 WDR62O43379 1518 aa13.37□□□□□ -0.27
MSL3-202ENST00000337339 TSHZ2Q9NRE2 1034 aa13.36□□□□□ -0.27
MSL3-202ENST00000337339 DCAF11Q8TEB1 546 aa13.36□□□□□ -0.27
MSL3-202ENST00000337339 TROQ12816 1431 aaPredicted RBP13.35□□□□□ -0.27
MSL3-202ENST00000337339 CARD11Q9BXL7 1154 aa13.35□□□□□ -0.27
MSL3-202ENST00000337339 ANKRD30BQ9BXX2 1392 aa13.34□□□□□ -0.27
MSL3-202ENST00000337339 ANKRD30AQ9BXX3 1397 aa13.34□□□□□ -0.27
MSL3-202ENST00000337339 TCOF1Q13428 1488 aaKnown RBP13.34□□□□□ -0.27
MSL3-202ENST00000337339 PRKRIP1Q9H875 184 aaPredicted RBP13.33□□□□□ -0.27
MSL3-202ENST00000337339 KIF7Q2M1P5 1343 aa13.33□□□□□ -0.28
MSL3-202ENST00000337339 SALL2Q9Y467 1007 aaPredicted RBP13.32□□□□□ -0.28
MSL3-202ENST00000337339 KIAA0556O60303 1618 aa13.32□□□□□ -0.28
MSL3-202ENST00000337339 ARHGEF11O15085 1522 aa13.31□□□□□ -0.28
MSL3-202ENST00000337339 EIF4G3O43432 1585 aaKnown RBP13.31□□□□□ -0.28
MSL3-202ENST00000337339 DENND4BO75064 1496 aaPredicted RBP13.31□□□□□ -0.28
MSL3-202ENST00000337339 CCDC7Q96M83 1385 aa13.31□□□□□ -0.28
MSL3-202ENST00000337339 PTPRGP23470 1445 aa13.31□□□□□ -0.28
MSL3-202ENST00000337339 SYNJ2O15056 1496 aa13.31□□□□□ -0.28
MSL3-202ENST00000337339 NCOA1Q15788 1441 aa13.29□□□□□ -0.28
MSL3-202ENST00000337339 ANKRD50Q9ULJ7 1429 aa13.29□□□□□ -0.28
MSL3-202ENST00000337339 CAMSAP2Q08AD1 1489 aa13.29□□□□□ -0.28
MSL3-202ENST00000337339 ROCK1Q13464 1354 aa13.29□□□□□ -0.28
MSL3-202ENST00000337339 GPATCH8Q9UKJ3 1502 aaKnown RBP13.29□□□□□ -0.28
MSL3-202ENST00000337339 AKNAQ7Z591 1439 aa13.28□□□□□ -0.28
MSL3-202ENST00000337339 RAPGEF6Q8TEU7 1601 aa13.28□□□□□ -0.28
MSL3-202ENST00000337339 TMC1Q8TDI8 760 aa13.27□□□□□ -0.29
MSL3-202ENST00000337339 MAGI1Q96QZ7 1491 aaPredicted RBP13.27□□□□□ -0.29
MSL3-202ENST00000337339 ST20-MTHFSA0A0A6YYL1 179 aa13.26□□□□□ -0.29
MSL3-202ENST00000337339 USP47Q96K76 1375 aa13.26□□□□□ -0.29
MSL3-202ENST00000337339 RPRD2Q5VT52 1461 aaKnown RBP13.25□□□□□ -0.29
MSL3-202ENST00000337339 CNTLNQ9NXG0 1405 aa13.25□□□□□ -0.29
MSL3-202ENST00000337339 KIF15Q9NS87 1388 aa13.24□□□□□ -0.29
MSL3-202ENST00000337339 CEP170Q5SW79 1584 aa13.24□□□□□ -0.29
MSL3-202ENST00000337339 ATP10BO94823 1461 aa13.23□□□□□ -0.29
MSL3-202ENST00000337339 C9orf84Q5VXU9 1444 aa13.22□□□□□ -0.29
MSL3-202ENST00000337339 KDM5BQ9UGL1 1544 aa13.22□□□□□ -0.29
MSL3-202ENST00000337339 KIAA1107Q9UPP5 1409 aa13.22□□□□□ -0.29
MSL3-202ENST00000337339 KIF14Q15058 1648 aa13.22□□□□□ -0.29
MSL3-202ENST00000337339 B4GALNT3Q6L9W6 998 aa13.22□□□□□ -0.29
MSL3-202ENST00000337339 RBM19Q9Y4C8 960 aaKnown RBP13.19□□□□□ -0.3
MSL3-202ENST00000337339 PZPP20742 1482 aa13.19□□□□□ -0.3
MSL3-202ENST00000337339 ROCK2O75116 1388 aaKnown RBP13.18□□□□□ -0.3
MSL3-202ENST00000337339 GCC2Q8IWJ2 1684 aa13.18□□□□□ -0.3
MSL3-202ENST00000337339 DNMT1P26358 1616 aaKnown RBP13.18□□□□□ -0.3
MSL3-202ENST00000337339 NBPF1Q3BBV0 1214 aa13.18□□□□□ -0.3
MSL3-202ENST00000337339 NUP160Q12769 1436 aa13.17□□□□□ -0.3
MSL3-202ENST00000337339 CC2D1BQ5T0F9 858 aaKnown RBP13.16□□□□□ -0.3
MSL3-202ENST00000337339 TEX14Q8IWB6 1497 aa13.16□□□□□ -0.3
MSL3-202ENST00000337339 SENP3Q9H4L4 574 aaPredicted RBP13.13□□□□□ -0.31
MSL3-202ENST00000337339 AFAP1Q8N556 730 aa13.13□□□□□ -0.31
MSL3-202ENST00000337339 CCDC144AA2RUR9 1427 aa13.12□□□□□ -0.31
MSL3-202ENST00000337339 EFCAB2Q5VUJ9 269 aa13.11□□□□□ -0.31
MSL3-202ENST00000337339 ZBED9Q6R2W3 1325 aa13.11□□□□□ -0.31
MSL3-202ENST00000337339 ERICH6Q7L0X2 663 aa13.11□□□□□ -0.31
MSL3-202ENST00000337339 RSPH4AQ5TD94 716 aa13.11□□□□□ -0.31
MSL3-202ENST00000337339 PPP4R2Q9NY27 417 aa13.11□□□□□ -0.31
MSL3-202ENST00000337339 CHGAP10645 457 aaKnown RBP13.1□□□□□ -0.31
MSL3-202ENST00000337339 ARHGAP5Q13017 1502 aa13.1□□□□□ -0.31
MSL3-202ENST00000337339 SPATA31E1Q6ZUB1 1445 aa13.09□□□□□ -0.31
MSL3-202ENST00000337339 CCDC136Q96JN2 1154 aa13.08□□□□□ -0.32
MSL3-202ENST00000337339 ITSN2Q9NZM3 1697 aa13.06□□□□□ -0.32
MSL3-202ENST00000337339 ABCC10Q5T3U5 1492 aa13.06□□□□□ -0.32
MSL3-202ENST00000337339 SPAG9O60271 1321 aaKnown RBP13.06□□□□□ -0.32
MSL3-202ENST00000337339 CCDC141Q6ZP82 1450 aa13.05□□□□□ -0.32
MSL3-202ENST00000337339 MYT1Q01538 1121 aa13.05□□□□□ -0.32
MSL3-202ENST00000337339 PNISRQ8TF01 805 aaKnown RBP13.05□□□□□ -0.32
MSL3-202ENST00000337339 PANK3Q9H999 370 aa13.05□□□□□ -0.32
MSL3-202ENST00000337339 KIF3BO15066 747 aa13.05□□□□□ -0.32
MSL3-202ENST00000337339 ADGRL2O95490 1459 aa13.04□□□□□ -0.32
MSL3-202ENST00000337339 PLEKHH2Q8IVE3 1493 aa13.04□□□□□ -0.32
MSL3-202ENST00000337339 NUDCQ9Y266 331 aa13.04□□□□□ -0.32
MSL3-202ENST00000337339 DHX29Q7Z478 1369 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms