RNA–Protein interactions for RNA: ENST00000334409.9

PDCD1-201, Transcript of programmed cell death 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD1, Length 2,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-201ENST00000334409 GPATCH8Q9UKJ3 1502 aaKnown RBP24.74■■□□□ 1.55
PDCD1-201ENST00000334409 CFDP1Q9UEE9 299 aaPredicted RBP24.74■■□□□ 1.55
PDCD1-201ENST00000334409 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.72■■□□□ 1.55
PDCD1-201ENST00000334409 TTC37Q6PGP7 1564 aa24.71■■□□□ 1.55
PDCD1-201ENST00000334409 PTPN23Q9H3S7 1636 aa24.71■■□□□ 1.55
PDCD1-201ENST00000334409 CDC42BPAQ5VT25 1732 aa24.68■■□□□ 1.54
PDCD1-201ENST00000334409 MIA2Q96PC5 1412 aa24.66■■□□□ 1.54
PDCD1-201ENST00000334409 ITSN2Q9NZM3 1697 aa24.63■■□□□ 1.53
PDCD1-201ENST00000334409 DNAJC5Q9H3Z4 198 aa24.62■■□□□ 1.53
PDCD1-201ENST00000334409 TCOF1Q13428 1488 aaKnown RBP24.6■■□□□ 1.53
PDCD1-201ENST00000334409 CDC42BPBQ9Y5S2 1711 aa24.6■■□□□ 1.53
PDCD1-201ENST00000334409 BCL11AQ9H165 835 aa24.59■■□□□ 1.53
PDCD1-201ENST00000334409 CHIC2Q9UKJ5 165 aa24.59■■□□□ 1.53
PDCD1-201ENST00000334409 CAMSAP2Q08AD1 1489 aa24.59■■□□□ 1.53
PDCD1-201ENST00000334409 ANP32EQ9BTT0 268 aa24.59■■□□□ 1.53
PDCD1-201ENST00000334409 PTPRKQ15262 1439 aa24.59■■□□□ 1.53
PDCD1-201ENST00000334409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.59■■□□□ 1.53
PDCD1-201ENST00000334409 ARHGAP5Q13017 1502 aa24.58■■□□□ 1.53
PDCD1-201ENST00000334409 PREX2Q70Z35 1606 aa24.57■■□□□ 1.52
PDCD1-201ENST00000334409 MYO5CQ9NQX4 1742 aa24.57■■□□□ 1.52
PDCD1-201ENST00000334409 HNRNPMP52272 730 aaKnown RBP eCLIP24.56■■□□□ 1.52
PDCD1-201ENST00000334409 MAPKBP1O60336 1514 aa24.56■■□□□ 1.52
PDCD1-201ENST00000334409 PLCH2O75038 1416 aa24.55■■□□□ 1.52
PDCD1-201ENST00000334409 ABCA9Q8IUA7 1624 aa24.53■■□□□ 1.52
PDCD1-201ENST00000334409 YTHDC1Q96MU7 727 aaKnown RBP24.51■■□□□ 1.51
PDCD1-201ENST00000334409 SAMD9LQ8IVG5 1584 aa24.5■■□□□ 1.51
PDCD1-201ENST00000334409 FAM69CQ0P6D2 419 aa24.5■■□□□ 1.51
PDCD1-201ENST00000334409 EFCAB2Q5VUJ9 269 aa24.5■■□□□ 1.51
PDCD1-201ENST00000334409 ABCC5O15440 1437 aa24.49■■□□□ 1.51
PDCD1-201ENST00000334409 DAPK1P53355 1430 aa24.48■■□□□ 1.51
PDCD1-201ENST00000334409 CD109Q6YHK3 1445 aa24.48■■□□□ 1.51
PDCD1-201ENST00000334409 RRP7BPQ9NSQ0 103 aa24.48■■□□□ 1.51
PDCD1-201ENST00000334409 DNMT1P26358 1616 aaKnown RBP24.44■■□□□ 1.5
PDCD1-201ENST00000334409 SYCP2Q9BX26 1530 aa24.43■■□□□ 1.5
PDCD1-201ENST00000334409 FANCAO15360 1455 aa24.43■■□□□ 1.5
PDCD1-201ENST00000334409 MIER1Q8N108 512 aa24.41■■□□□ 1.5
PDCD1-201ENST00000334409 ARHGEF12Q9NZN5 1544 aa24.41■■□□□ 1.5
PDCD1-201ENST00000334409 MBD5Q9P267 1494 aa24.41■■□□□ 1.5
PDCD1-201ENST00000334409 DIP2BQ9P265 1576 aa24.4■■□□□ 1.5
PDCD1-201ENST00000334409 RAB3GAP2Q9H2M9 1393 aa24.38■■□□□ 1.49
PDCD1-201ENST00000334409 SETD5Q9C0A6 1442 aa24.38■■□□□ 1.49
PDCD1-201ENST00000334409 TSPY4P0CV99 314 aa24.37■■□□□ 1.49
PDCD1-201ENST00000334409 TSPY10P0CW01 314 aa24.37■■□□□ 1.49
PDCD1-201ENST00000334409 ARAP3Q8WWN8 1544 aa24.36■■□□□ 1.49
PDCD1-201ENST00000334409 AFAP1Q8N556 730 aa24.35■■□□□ 1.49
PDCD1-201ENST00000334409 TSPOAP1O95153 1857 aa24.35■■□□□ 1.49
PDCD1-201ENST00000334409 TRAPPC8Q9Y2L5 1435 aa24.35■■□□□ 1.49
PDCD1-201ENST00000334409 AKNAQ7Z591 1439 aa24.34■■□□□ 1.49
PDCD1-201ENST00000334409 ABCC1P33527 1531 aa24.33■■□□□ 1.49
PDCD1-201ENST00000334409 GLI2P10070 1586 aa24.33■■□□□ 1.49
PDCD1-201ENST00000334409 MAP3K4Q9Y6R4 1608 aa24.33■■□□□ 1.49
PDCD1-201ENST00000334409 NAIPQ13075 1403 aa24.33■■□□□ 1.49
PDCD1-201ENST00000334409 KIAA1107Q9UPP5 1409 aa24.33■■□□□ 1.49
PDCD1-201ENST00000334409 ADGRL1O94910 1474 aa24.32■■□□□ 1.48
PDCD1-201ENST00000334409 CCDC141Q6ZP82 1450 aa24.32■■□□□ 1.48
PDCD1-201ENST00000334409 PLEKHH2Q8IVE3 1493 aa24.32■■□□□ 1.48
PDCD1-201ENST00000334409 SCAPERQ9BY12 1400 aa24.32■■□□□ 1.48
PDCD1-201ENST00000334409 CROCC2H7BZ55 1655 aa24.32■■□□□ 1.48
PDCD1-201ENST00000334409 C9orf84Q5VXU9 1444 aa24.32■■□□□ 1.48
PDCD1-201ENST00000334409 ARHGEF5Q12774 1597 aa24.31■■□□□ 1.48
PDCD1-201ENST00000334409 HFM1A2PYH4 1435 aa24.31■■□□□ 1.48
PDCD1-201ENST00000334409 SUPT16HQ9Y5B9 1047 aaKnown RBP24.3■■□□□ 1.48
PDCD1-201ENST00000334409 DHX57Q6P158 1386 aaKnown RBP24.3■■□□□ 1.48
PDCD1-201ENST00000334409 RSPH4AQ5TD94 716 aa24.29■■□□□ 1.48
PDCD1-201ENST00000334409 KIF13AQ9H1H9 1805 aa24.29■■□□□ 1.48
PDCD1-201ENST00000334409 NCOA1Q15788 1441 aa24.28■■□□□ 1.48
PDCD1-201ENST00000334409 TRHP20396 242 aaPredicted RBP24.26■■□□□ 1.47
PDCD1-201ENST00000334409 TSHZ2Q9NRE2 1034 aa24.26■■□□□ 1.47
PDCD1-201ENST00000334409 ROCK1Q13464 1354 aa24.26■■□□□ 1.47
PDCD1-201ENST00000334409 KDM6BO15054 1643 aa24.26■■□□□ 1.47
PDCD1-201ENST00000334409 MYT1LQ9UL68 1186 aa24.26■■□□□ 1.47
PDCD1-201ENST00000334409 ANKRD30AQ9BXX3 1397 aa24.25■■□□□ 1.47
PDCD1-201ENST00000334409 SHANK2Q9UPX8 1470 aa24.24■■□□□ 1.47
PDCD1-201ENST00000334409 RAPGEF3O95398 923 aa24.23■■□□□ 1.47
PDCD1-201ENST00000334409 ADGBQ8N7X0 1667 aa24.23■■□□□ 1.47
PDCD1-201ENST00000334409 SPAG9O60271 1321 aaKnown RBP24.22■■□□□ 1.47
PDCD1-201ENST00000334409 ADGRL2O95490 1459 aa24.21■■□□□ 1.47
PDCD1-201ENST00000334409 PPRC1Q5VV67 1664 aaKnown RBP24.21■■□□□ 1.47
PDCD1-201ENST00000334409 GCC2Q8IWJ2 1684 aa24.21■■□□□ 1.47
PDCD1-201ENST00000334409 CFAP74Q9C0B2 1584 aa24.2■■□□□ 1.47
PDCD1-201ENST00000334409 KIF15Q9NS87 1388 aa24.2■■□□□ 1.46
PDCD1-201ENST00000334409 NEO1Q92859 1461 aa24.19■■□□□ 1.46
PDCD1-201ENST00000334409 TRIM52Q96A61 297 aa24.19■■□□□ 1.46
PDCD1-201ENST00000334409 MAST1Q9Y2H9 1570 aa24.14■■□□□ 1.45
PDCD1-201ENST00000334409 POGZQ7Z3K3 1410 aa24.14■■□□□ 1.45
PDCD1-201ENST00000334409 ANKRD50Q9ULJ7 1429 aa24.14■■□□□ 1.45
PDCD1-201ENST00000334409 DENND4BO75064 1496 aaPredicted RBP24.13■■□□□ 1.45
PDCD1-201ENST00000334409 ZNF518AQ6AHZ1 1483 aa24.12■■□□□ 1.45
PDCD1-201ENST00000334409 TEX14Q8IWB6 1497 aa24.11■■□□□ 1.45
PDCD1-201ENST00000334409 ZFYVE16Q7Z3T8 1539 aa24.1■■□□□ 1.45
PDCD1-201ENST00000334409 ATP7AQ04656 1500 aa24.09■■□□□ 1.45
PDCD1-201ENST00000334409 RTEL1-TNFRSF6BF6WH68 1400 aa24.07■■□□□ 1.44
PDCD1-201ENST00000334409 PLXNC1O60486 1568 aa24.06■■□□□ 1.44
PDCD1-201ENST00000334409 INO80Q9ULG1 1556 aaPredicted RBP24.06■■□□□ 1.44
PDCD1-201ENST00000334409 KIDINS220Q9ULH0 1771 aa24.05■■□□□ 1.44
PDCD1-201ENST00000334409 COL17A1Q9UMD9 1497 aaPredicted RBP24.04■■□□□ 1.44
PDCD1-201ENST00000334409 RICTORQ6R327 1708 aa24.04■■□□□ 1.44
PDCD1-201ENST00000334409 KDM5CP41229 1560 aa24.04■■□□□ 1.44
PDCD1-201ENST00000334409 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.04■■□□□ 1.44
PDCD1-201ENST00000334409 FRMPD1Q5SYB0 1578 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms