RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 DNMT1P26358 1616 aaKnown RBP29■■■□□ 2.23
LINC01006-201ENST00000333319 ROCK1Q13464 1354 aa29■■■□□ 2.23
LINC01006-201ENST00000333319 PRG4Q92954 1404 aaPredicted RBP28.99■■■□□ 2.23
LINC01006-201ENST00000333319 JPH4Q96JJ6 628 aa28.98■■■□□ 2.23
LINC01006-201ENST00000333319 TROQ12816 1431 aaPredicted RBP28.98■■■□□ 2.23
LINC01006-201ENST00000333319 NUP160Q12769 1436 aa28.97■■■□□ 2.23
LINC01006-201ENST00000333319 CARMIL2Q6F5E8 1435 aa28.96■■■□□ 2.23
LINC01006-201ENST00000333319 FOXD1Q16676 465 aa28.92■■■□□ 2.22
LINC01006-201ENST00000333319 ANP32CO43423 234 aa28.9■■■□□ 2.22
LINC01006-201ENST00000333319 CFDP1Q9UEE9 299 aaPredicted RBP28.9■■■□□ 2.22
LINC01006-201ENST00000333319 CAMSAP2Q08AD1 1489 aa28.87■■■□□ 2.21
LINC01006-201ENST00000333319 ITSN2Q9NZM3 1697 aa28.86■■■□□ 2.21
LINC01006-201ENST00000333319 KIF14Q15058 1648 aa28.86■■■□□ 2.21
LINC01006-201ENST00000333319 GPATCH8Q9UKJ3 1502 aaKnown RBP28.86■■■□□ 2.21
LINC01006-201ENST00000333319 CCER2I3L3R5 266 aa28.84■■■□□ 2.21
LINC01006-201ENST00000333319 ADCY10Q96PN6 1610 aa28.84■■■□□ 2.21
LINC01006-201ENST00000333319 L3MBTL2Q969R5 705 aa28.82■■■□□ 2.2
LINC01006-201ENST00000333319 ZNF777Q9ULD5 760 aaPredicted RBP28.82■■■□□ 2.2
LINC01006-201ENST00000333319 ANKRD30BQ9BXX2 1392 aa28.81■■■□□ 2.2
LINC01006-201ENST00000333319 HSPA5P11021 654 aaKnown RBP28.8■■■□□ 2.2
LINC01006-201ENST00000333319 SLC4A1APQ9BWU0 796 aaKnown RBP28.8■■■□□ 2.2
LINC01006-201ENST00000333319 SUPT16HQ9Y5B9 1047 aaKnown RBP28.79■■■□□ 2.2
LINC01006-201ENST00000333319 ABCA8O94911 1581 aa28.77■■■□□ 2.2
LINC01006-201ENST00000333319 NCOA1Q15788 1441 aa28.76■■■□□ 2.2
LINC01006-201ENST00000333319 PLEKHD1A6NEE1 506 aa28.76■■■□□ 2.19
LINC01006-201ENST00000333319 RPRD2Q5VT52 1461 aaKnown RBP28.75■■■□□ 2.19
LINC01006-201ENST00000333319 ADGBQ8N7X0 1667 aa28.74■■■□□ 2.19
LINC01006-201ENST00000333319 EIF4G2P78344 907 aaKnown RBP eCLIP28.73■■■□□ 2.19
LINC01006-201ENST00000333319 ATP10BO94823 1461 aa28.72■■■□□ 2.19
LINC01006-201ENST00000333319 CROCC2H7BZ55 1655 aa28.7■■■□□ 2.19
LINC01006-201ENST00000333319 WASHC2AQ641Q2 1341 aa28.7■■■□□ 2.19
LINC01006-201ENST00000333319 ADGRL2O95490 1459 aa28.69■■■□□ 2.18
LINC01006-201ENST00000333319 PZPP20742 1482 aa28.68■■■□□ 2.18
LINC01006-201ENST00000333319 CDC42BPAQ5VT25 1732 aa28.67■■■□□ 2.18
LINC01006-201ENST00000333319 TEX14Q8IWB6 1497 aa28.66■■■□□ 2.18
LINC01006-201ENST00000333319 ANKRD30AQ9BXX3 1397 aa28.66■■■□□ 2.18
LINC01006-201ENST00000333319 ABCC10Q5T3U5 1492 aa28.65■■■□□ 2.18
LINC01006-201ENST00000333319 NBPF8Q3BBV2 869 aa28.64■■■□□ 2.18
LINC01006-201ENST00000333319 PTPRGP23470 1445 aa28.6■■■□□ 2.17
LINC01006-201ENST00000333319 ANKRD50Q9ULJ7 1429 aa28.58■■■□□ 2.17
LINC01006-201ENST00000333319 KIAA1107Q9UPP5 1409 aa28.56■■■□□ 2.16
LINC01006-201ENST00000333319 C11orf95C9JLR9 678 aaPredicted RBP28.54■■■□□ 2.16
LINC01006-201ENST00000333319 PKD2Q13563 968 aa28.54■■■□□ 2.16
LINC01006-201ENST00000333319 C9orf84Q5VXU9 1444 aa28.54■■■□□ 2.16
LINC01006-201ENST00000333319 SHANK2Q9UPX8 1470 aa28.53■■■□□ 2.16
LINC01006-201ENST00000333319 TSPY4P0CV99 314 aa28.52■■■□□ 2.16
LINC01006-201ENST00000333319 TSPY10P0CW01 314 aa28.52■■■□□ 2.16
LINC01006-201ENST00000333319 CCDC7Q96M83 1385 aa28.51■■■□□ 2.15
LINC01006-201ENST00000333319 CNTLNQ9NXG0 1405 aa28.51■■■□□ 2.15
LINC01006-201ENST00000333319 CHD1O14646 1710 aa28.5■■■□□ 2.15
LINC01006-201ENST00000333319 HNRNPMP52272 730 aaKnown RBP eCLIP28.49■■■□□ 2.152e-6■■■□□ 16.4
LINC01006-201ENST00000333319 SPATA31E1Q6ZUB1 1445 aa28.47■■■□□ 2.15
LINC01006-201ENST00000333319 NUP155O75694 1391 aa28.46■■■□□ 2.15
LINC01006-201ENST00000333319 FKBP8Q14318 412 aa28.43■■■□□ 2.14
LINC01006-201ENST00000333319 MBD5Q9P267 1494 aa28.43■■■□□ 2.14
LINC01006-201ENST00000333319 ARHGEF5Q12774 1597 aa28.42■■■□□ 2.14
LINC01006-201ENST00000333319 KIF15Q9NS87 1388 aa28.41■■■□□ 2.14
LINC01006-201ENST00000333319 CDC42BPBQ9Y5S2 1711 aa28.4■■■□□ 2.14
LINC01006-201ENST00000333319 KIF7Q2M1P5 1343 aa28.39■■■□□ 2.14
LINC01006-201ENST00000333319 ZNF326Q5BKZ1 582 aaKnown RBP28.38■■■□□ 2.13
LINC01006-201ENST00000333319 SAMD9LQ8IVG5 1584 aa28.38■■■□□ 2.13
LINC01006-201ENST00000333319 PREX2Q70Z35 1606 aa28.38■■■□□ 2.13
LINC01006-201ENST00000333319 SHROOM2Q13796 1616 aa28.37■■■□□ 2.13
LINC01006-201ENST00000333319 HNRNPUQ00839 825 aaKnown RBP eCLIP28.36■■■□□ 2.13
LINC01006-201ENST00000333319 BCANQ96GW7 911 aa28.36■■■□□ 2.13
LINC01006-201ENST00000333319 POLR1AO95602 1720 aaPredicted RBP28.36■■■□□ 2.13
LINC01006-201ENST00000333319 KDM5DQ9BY66 1539 aa28.36■■■□□ 2.13
LINC01006-201ENST00000333319 CCDC141Q6ZP82 1450 aa28.35■■■□□ 2.13
LINC01006-201ENST00000333319 PRKRIP1Q9H875 184 aaPredicted RBP28.35■■■□□ 2.13
LINC01006-201ENST00000333319 NEFLP07196 543 aa28.34■■■□□ 2.13
LINC01006-201ENST00000333319 CCDC184Q52MB2 194 aa28.31■■■□□ 2.12
LINC01006-201ENST00000333319 RSPH4AQ5TD94 716 aa28.31■■■□□ 2.12
LINC01006-201ENST00000333319 USP47Q96K76 1375 aa28.3■■■□□ 2.12
LINC01006-201ENST00000333319 ERCC6L2Q5T890 1561 aa28.29■■■□□ 2.12
LINC01006-201ENST00000333319 TTC37Q6PGP7 1564 aa28.28■■■□□ 2.12
LINC01006-201ENST00000333319 ARHGAP5Q13017 1502 aa28.26■■■□□ 2.11
LINC01006-201ENST00000333319 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.26■■■□□ 2.11
LINC01006-201ENST00000333319 UHRF1BP1Q6BDS2 1440 aa28.26■■■□□ 2.11
LINC01006-201ENST00000333319 SYCP2Q9BX26 1530 aa28.25■■■□□ 2.11
LINC01006-201ENST00000333319 ABCC2Q92887 1545 aa28.25■■■□□ 2.11
LINC01006-201ENST00000333319 BCORL1Q5H9F3 1711 aa28.23■■■□□ 2.11
LINC01006-201ENST00000333319 KDM5CP41229 1560 aa28.22■■■□□ 2.11
LINC01006-201ENST00000333319 ARHGEF12Q9NZN5 1544 aa28.22■■■□□ 2.11
LINC01006-201ENST00000333319 FAM135AQ9P2D6 1515 aa28.21■■■□□ 2.11
LINC01006-201ENST00000333319 MRS2Q9HD23 443 aa28.21■■■□□ 2.11
LINC01006-201ENST00000333319 RALGAPBQ86X10 1494 aa28.2■■■□□ 2.11
LINC01006-201ENST00000333319 KDM2AQ9Y2K7 1162 aa28.2■■■□□ 2.1
LINC01006-201ENST00000333319 POLR3GLQ9BT43 218 aa28.18■■■□□ 2.1
LINC01006-201ENST00000333319 FAM9BQ8IZU0 186 aa28.18■■■□□ 2.1
LINC01006-201ENST00000333319 CARD11Q9BXL7 1154 aa28.17■■■□□ 2.1
LINC01006-201ENST00000333319 MYO5CQ9NQX4 1742 aa28.17■■■□□ 2.1
LINC01006-201ENST00000333319 TSHZ2Q9NRE2 1034 aa28.17■■■□□ 2.1
LINC01006-201ENST00000333319 MAST1Q9Y2H9 1570 aa28.17■■■□□ 2.1
LINC01006-201ENST00000333319 DCAF11Q8TEB1 546 aa28.16■■■□□ 2.1
LINC01006-201ENST00000333319 ARID4BQ4LE39 1312 aaPredicted RBP28.13■■■□□ 2.09
LINC01006-201ENST00000333319 DHX29Q7Z478 1369 aaKnown RBP28.13■■■□□ 2.09
LINC01006-201ENST00000333319 PLEKHH2Q8IVE3 1493 aa28.12■■■□□ 2.09
LINC01006-201ENST00000333319 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.1■■■□□ 2.09
LINC01006-201ENST00000333319 UNC13BO14795 1591 aa28.09■■■□□ 2.09
LINC01006-201ENST00000333319 CCDC144AA2RUR9 1427 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms