RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 KIF7Q2M1P5 1343 aa11.75□□□□□ -0.53
LIMK2-201ENST00000331728 THOC2Q8NI27 1593 aaKnown RBP11.75□□□□□ -0.53
LIMK2-201ENST00000331728 UGGT2Q9NYU1 1516 aa11.74□□□□□ -0.53
LIMK2-201ENST00000331728 NBR1Q14596 966 aa11.74□□□□□ -0.53
LIMK2-201ENST00000331728 NBPF8Q3BBV2 869 aa11.74□□□□□ -0.53
LIMK2-201ENST00000331728 MIA2Q96PC5 1412 aa11.74□□□□□ -0.53
LIMK2-201ENST00000331728 URB2Q14146 1524 aaKnown RBP11.74□□□□□ -0.53
LIMK2-201ENST00000331728 HECW1Q76N89 1606 aa11.74□□□□□ -0.53
LIMK2-201ENST00000331728 C11orf95C9JLR9 678 aaPredicted RBP11.74□□□□□ -0.53
LIMK2-201ENST00000331728 FBLN2P98095 1184 aa11.74□□□□□ -0.53
LIMK2-201ENST00000331728 NCOA1Q15788 1441 aa11.73□□□□□ -0.53
LIMK2-201ENST00000331728 KDM2AQ9Y2K7 1162 aa11.73□□□□□ -0.53
LIMK2-201ENST00000331728 EPRSP07814 1512 aaKnown RBP11.72□□□□□ -0.53
LIMK2-201ENST00000331728 CDK13Q14004 1512 aaKnown RBP11.72□□□□□ -0.53
LIMK2-201ENST00000331728 ZNF644Q9H582 1327 aaPredicted RBP11.72□□□□□ -0.53
LIMK2-201ENST00000331728 CARD11Q9BXL7 1154 aa11.72□□□□□ -0.53
LIMK2-201ENST00000331728 NUDCQ9Y266 331 aa11.72□□□□□ -0.53
LIMK2-201ENST00000331728 SALL2Q9Y467 1007 aaPredicted RBP11.72□□□□□ -0.53
LIMK2-201ENST00000331728 PKD2Q13563 968 aa11.71□□□□□ -0.53
LIMK2-201ENST00000331728 AKNAQ7Z591 1439 aa11.71□□□□□ -0.53
LIMK2-201ENST00000331728 GCC2Q8IWJ2 1684 aa11.71□□□□□ -0.53
LIMK2-201ENST00000331728 SAMD9Q5K651 1589 aa11.7□□□□□ -0.54
LIMK2-201ENST00000331728 NPM2Q86SE8 214 aaKnown RBP11.7□□□□□ -0.54
LIMK2-201ENST00000331728 ZBTB47Q9UFB7 747 aaPredicted RBP11.69□□□□□ -0.54
LIMK2-201ENST00000331728 TCOF1Q13428 1488 aaKnown RBP11.69□□□□□ -0.54
LIMK2-201ENST00000331728 USP47Q96K76 1375 aa11.69□□□□□ -0.54
LIMK2-201ENST00000331728 ANKRD30BQ9BXX2 1392 aa11.69□□□□□ -0.54
LIMK2-201ENST00000331728 LRRIQ1Q96JM4 1722 aa11.69□□□□□ -0.54
LIMK2-201ENST00000331728 PAK3O75914 559 aaPredicted RBP11.68□□□□□ -0.54
LIMK2-201ENST00000331728 DAPK1P53355 1430 aa11.68□□□□□ -0.54
LIMK2-201ENST00000331728 TSPY4P0CV99 314 aa11.68□□□□□ -0.54
LIMK2-201ENST00000331728 TSPY10P0CW01 314 aa11.68□□□□□ -0.54
LIMK2-201ENST00000331728 SMG6Q86US8 1419 aaKnown RBP11.68□□□□□ -0.54
LIMK2-201ENST00000331728 LAMC3Q9Y6N6 1575 aa11.68□□□□□ -0.54
LIMK2-201ENST00000331728 DENND4BO75064 1496 aaPredicted RBP11.67□□□□□ -0.54
LIMK2-201ENST00000331728 IQGAP2Q13576 1575 aa11.67□□□□□ -0.54
LIMK2-201ENST00000331728 RPRD2Q5VT52 1461 aaKnown RBP11.67□□□□□ -0.54
LIMK2-201ENST00000331728 IPO9Q96P70 1041 aaKnown RBP11.66□□□□□ -0.54
LIMK2-201ENST00000331728 ROCK1Q13464 1354 aa11.66□□□□□ -0.54
LIMK2-201ENST00000331728 MAGI3Q5TCQ9 1506 aa11.66□□□□□ -0.54
LIMK2-201ENST00000331728 CHMP7Q8WUX9 453 aaPredicted RBP11.66□□□□□ -0.54
LIMK2-201ENST00000331728 ANKRD30AQ9BXX3 1397 aa11.65□□□□□ -0.54
LIMK2-201ENST00000331728 ARHGEF11O15085 1522 aa11.65□□□□□ -0.55
LIMK2-201ENST00000331728 KDM6BO15054 1643 aa11.64□□□□□ -0.55
LIMK2-201ENST00000331728 ABCA5Q8WWZ7 1642 aa11.64□□□□□ -0.55
LIMK2-201ENST00000331728 PLEKHD1A6NEE1 506 aa11.64□□□□□ -0.55
LIMK2-201ENST00000331728 ABCC5O15440 1437 aa11.64□□□□□ -0.55
LIMK2-201ENST00000331728 ROCK2O75116 1388 aaKnown RBP11.63□□□□□ -0.55
LIMK2-201ENST00000331728 NUP155O75694 1391 aa11.63□□□□□ -0.55
LIMK2-201ENST00000331728 DCAF11Q8TEB1 546 aa11.63□□□□□ -0.55
LIMK2-201ENST00000331728 KIF21AQ7Z4S6 1674 aa11.62□□□□□ -0.55
LIMK2-201ENST00000331728 POLR1AO95602 1720 aaPredicted RBP11.62□□□□□ -0.55
LIMK2-201ENST00000331728 DAXXQ9UER7 740 aaPredicted RBP11.62□□□□□ -0.55
LIMK2-201ENST00000331728 RNF123Q5XPI4 1314 aa11.61□□□□□ -0.55
LIMK2-201ENST00000331728 KIF15Q9NS87 1388 aa11.61□□□□□ -0.55
LIMK2-201ENST00000331728 SPATA31E1Q6ZUB1 1445 aa11.6□□□□□ -0.55
LIMK2-201ENST00000331728 TEX14Q8IWB6 1497 aa11.6□□□□□ -0.55
LIMK2-201ENST00000331728 KIAA1107Q9UPP5 1409 aa11.6□□□□□ -0.55
LIMK2-201ENST00000331728 ST20-MTHFSA0A0A6YYL1 179 aa11.59□□□□□ -0.55
LIMK2-201ENST00000331728 RALBP1Q15311 655 aa11.59□□□□□ -0.55
LIMK2-201ENST00000331728 RGL3Q3MIN7 710 aa11.59□□□□□ -0.55
LIMK2-201ENST00000331728 ARID4BQ4LE39 1312 aaPredicted RBP11.59□□□□□ -0.55
LIMK2-201ENST00000331728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.59□□□□□ -0.555e-7■□□□□ 11
LIMK2-201ENST00000331728 WDR62O43379 1518 aa11.58□□□□□ -0.56
LIMK2-201ENST00000331728 MYBBP1AQ9BQG0 1328 aaKnown RBP11.58□□□□□ -0.56
LIMK2-201ENST00000331728 PRG4Q92954 1404 aaPredicted RBP11.58□□□□□ -0.56
LIMK2-201ENST00000331728 RCAN3Q9UKA8 241 aa11.57□□□□□ -0.56
LIMK2-201ENST00000331728 TROQ12816 1431 aaPredicted RBP11.57□□□□□ -0.56
LIMK2-201ENST00000331728 ANKRD50Q9ULJ7 1429 aa11.57□□□□□ -0.56
LIMK2-201ENST00000331728 DHX29Q7Z478 1369 aaKnown RBP11.57□□□□□ -0.56
LIMK2-201ENST00000331728 DNAJC5BQ9UF47 199 aa11.57□□□□□ -0.56
LIMK2-201ENST00000331728 KTN1Q86UP2 1357 aaKnown RBP11.57□□□□□ -0.56
LIMK2-201ENST00000331728 PNISRQ8TF01 805 aaKnown RBP11.56□□□□□ -0.56
LIMK2-201ENST00000331728 CARMIL2Q6F5E8 1435 aa11.55□□□□□ -0.56
LIMK2-201ENST00000331728 RRP1P56182 461 aaKnown RBP11.55□□□□□ -0.56
LIMK2-201ENST00000331728 NLRP13Q86W25 1043 aa11.55□□□□□ -0.56
LIMK2-201ENST00000331728 CAMSAP2Q08AD1 1489 aa11.55□□□□□ -0.56
LIMK2-201ENST00000331728 CC2D1BQ5T0F9 858 aaKnown RBP11.55□□□□□ -0.56
LIMK2-201ENST00000331728 KIAA0586Q9BVV6 1533 aa11.54□□□□□ -0.56
LIMK2-201ENST00000331728 EXOC6Q8TAG9 804 aa11.54□□□□□ -0.56
LIMK2-201ENST00000331728 TCERG1O14776 1098 aaKnown RBP11.53□□□□□ -0.56
LIMK2-201ENST00000331728 DNMT1P26358 1616 aaKnown RBP11.53□□□□□ -0.56
LIMK2-201ENST00000331728 BRD4O60885 1362 aaPredicted RBP11.53□□□□□ -0.56
LIMK2-201ENST00000331728 MRC2Q9UBG0 1479 aa11.53□□□□□ -0.56
LIMK2-201ENST00000331728 ADAMTS12P58397 1594 aa11.53□□□□□ -0.56
LIMK2-201ENST00000331728 NUP153P49790 1475 aaKnown RBP11.52□□□□□ -0.56
LIMK2-201ENST00000331728 LAS1LQ9Y4W2 734 aaKnown RBP11.52□□□□□ -0.56
LIMK2-201ENST00000331728 HNRNPMP52272 730 aaKnown RBP eCLIP11.52□□□□□ -0.571e-7■■■□□ 16.7
LIMK2-201ENST00000331728 PZPP20742 1482 aa11.51□□□□□ -0.57
LIMK2-201ENST00000331728 PDE3BQ13370 1112 aa11.51□□□□□ -0.57
LIMK2-201ENST00000331728 WDR43Q15061 677 aaKnown RBP eCLIP11.5□□□□□ -0.57
LIMK2-201ENST00000331728 JPH4Q96JJ6 628 aa11.5□□□□□ -0.57
LIMK2-201ENST00000331728 NEFMP07197 916 aa11.5□□□□□ -0.57
LIMK2-201ENST00000331728 IFT140Q96RY7 1462 aa11.5□□□□□ -0.57
LIMK2-201ENST00000331728 BCORL1Q5H9F3 1711 aa11.49□□□□□ -0.57
LIMK2-201ENST00000331728 USP35Q9P2H5 1018 aa11.49□□□□□ -0.57
LIMK2-201ENST00000331728 PBRM1Q86U86 1689 aa11.49□□□□□ -0.57
LIMK2-201ENST00000331728 C9orf84Q5VXU9 1444 aa11.49□□□□□ -0.57
LIMK2-201ENST00000331728 TARBP1Q13395 1621 aaKnown RBP11.49□□□□□ -0.57
LIMK2-201ENST00000331728 RAPGEF6Q8TEU7 1601 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms