RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 KDM5AP29375 1690 aaKnown RBP4.68□□□□□ -1.66
RGPD6-201ENST00000329516 ZC3H13Q5T200 1668 aaKnown RBP4.68□□□□□ -1.66
RGPD6-201ENST00000329516 PTPRGP23470 1445 aa4.67□□□□□ -1.66
RGPD6-201ENST00000329516 GAPVD1Q14C86 1478 aa4.67□□□□□ -1.66
RGPD6-201ENST00000329516 SVEP1Q4LDE5 3571 aa4.67□□□□□ -1.66
RGPD6-201ENST00000329516 ABCA6Q8N139 1617 aa4.66□□□□□ -1.66
RGPD6-201ENST00000329516 NCOA2Q15596 1464 aa4.66□□□□□ -1.66
RGPD6-201ENST00000329516 RAD54L2Q9Y4B4 1467 aa4.66□□□□□ -1.66
RGPD6-201ENST00000329516 MYOM3Q5VTT5 1437 aa4.66□□□□□ -1.66
RGPD6-201ENST00000329516 PZPP20742 1482 aa4.65□□□□□ -1.66
RGPD6-201ENST00000329516 HECW1Q76N89 1606 aa4.65□□□□□ -1.67
RGPD6-201ENST00000329516 PTPN23Q9H3S7 1636 aa4.65□□□□□ -1.67
RGPD6-201ENST00000329516 VPS8Q8N3P4 1428 aa4.65□□□□□ -1.67
RGPD6-201ENST00000329516 C11orf95C9JLR9 678 aaPredicted RBP4.65□□□□□ -1.67
RGPD6-201ENST00000329516 DMXL1Q9Y485 3027 aa4.64□□□□□ -1.67
RGPD6-201ENST00000329516 USP32Q8NFA0 1604 aa4.64□□□□□ -1.67
RGPD6-201ENST00000329516 DNMBPQ6XZF7 1577 aa4.64□□□□□ -1.67
RGPD6-201ENST00000329516 FGD5Q6ZNL6 1462 aa4.64□□□□□ -1.67
RGPD6-201ENST00000329516 NUP153P49790 1475 aaKnown RBP4.64□□□□□ -1.67
RGPD6-201ENST00000329516 INO80Q9ULG1 1556 aaPredicted RBP4.63□□□□□ -1.67
RGPD6-201ENST00000329516 ADGRB1O14514 1584 aa4.63□□□□□ -1.67
RGPD6-201ENST00000329516 KDM5DQ9BY66 1539 aa4.62□□□□□ -1.67
RGPD6-201ENST00000329516 CRYBG1Q9Y4K1 1723 aa4.62□□□□□ -1.67
RGPD6-201ENST00000329516 KDM5CP41229 1560 aa4.62□□□□□ -1.67
RGPD6-201ENST00000329516 CLASP1Q7Z460 1538 aa4.62□□□□□ -1.67
RGPD6-201ENST00000329516 GLI3P10071 1580 aa4.62□□□□□ -1.67
RGPD6-201ENST00000329516 ABCA9Q8IUA7 1624 aa4.61□□□□□ -1.67
RGPD6-201ENST00000329516 NAIPQ13075 1403 aa4.61□□□□□ -1.67
RGPD6-201ENST00000329516 EIF4G3O43432 1585 aaKnown RBP4.61□□□□□ -1.67
RGPD6-201ENST00000329516 PIK3C2BO00750 1634 aa4.6□□□□□ -1.67
RGPD6-201ENST00000329516 MROH2AA6NES4 1674 aa4.6□□□□□ -1.67
RGPD6-201ENST00000329516 ADGRG4Q8IZF6 3080 aa4.6□□□□□ -1.67
RGPD6-201ENST00000329516 LRRC9Q6ZRR7 1453 aa4.59□□□□□ -1.67
RGPD6-201ENST00000329516 DHX29Q7Z478 1369 aaKnown RBP4.59□□□□□ -1.67
RGPD6-201ENST00000329516 TRANK1O15050 2925 aa4.59□□□□□ -1.67
RGPD6-201ENST00000329516 NRXN3Q9Y4C0 1643 aa4.59□□□□□ -1.67
RGPD6-201ENST00000329516 MYO5CQ9NQX4 1742 aa4.59□□□□□ -1.67
RGPD6-201ENST00000329516 IQGAP1P46940 1657 aa4.59□□□□□ -1.67
RGPD6-201ENST00000329516 ADGBQ8N7X0 1667 aa4.59□□□□□ -1.68
RGPD6-201ENST00000329516 ASXL1Q8IXJ9 1541 aa4.58□□□□□ -1.68
RGPD6-201ENST00000329516 ATMQ13315 3056 aa4.58□□□□□ -1.68
RGPD6-201ENST00000329516 TRPM1Q7Z4N2 1603 aa4.57□□□□□ -1.68
RGPD6-201ENST00000329516 CCDC184Q52MB2 194 aa4.57□□□□□ -1.68
RGPD6-201ENST00000329516 NLRP1Q9C000 1473 aa4.57□□□□□ -1.68
RGPD6-201ENST00000329516 DNMT1P26358 1616 aaKnown RBP4.56□□□□□ -1.68
RGPD6-201ENST00000329516 SAMD9LQ8IVG5 1584 aa4.56□□□□□ -1.68
RGPD6-201ENST00000329516 MAGI1Q96QZ7 1491 aaPredicted RBP4.56□□□□□ -1.68
RGPD6-201ENST00000329516 KIAA0556O60303 1618 aa4.56□□□□□ -1.68
RGPD6-201ENST00000329516 NEUROD1Q13562 356 aa4.56□□□□□ -1.68
RGPD6-201ENST00000329516 NUP160Q12769 1436 aa4.56□□□□□ -1.68
RGPD6-201ENST00000329516 TTC37Q6PGP7 1564 aa4.55□□□□□ -1.68
RGPD6-201ENST00000329516 ABCC2Q92887 1545 aa4.55□□□□□ -1.68
RGPD6-201ENST00000329516 ADGRB2O60241 1585 aa4.55□□□□□ -1.68
RGPD6-201ENST00000329516 UNC13BO14795 1591 aa4.54□□□□□ -1.68
RGPD6-201ENST00000329516 PLXNC1O60486 1568 aa4.54□□□□□ -1.68
RGPD6-201ENST00000329516 ANKRD26Q9UPS8 1709 aa4.54□□□□□ -1.68
RGPD6-201ENST00000329516 ERBINQ96RT1 1412 aa4.53□□□□□ -1.68
RGPD6-201ENST00000329516 PPP1R15AO75807 674 aaPredicted RBP4.53□□□□□ -1.68
RGPD6-201ENST00000329516 VIRMAQ69YN4 1812 aaKnown RBP4.53□□□□□ -1.68
RGPD6-201ENST00000329516 DUOX2Q9NRD8 1548 aa4.53□□□□□ -1.68
RGPD6-201ENST00000329516 EFCAB5A4FU69 1503 aa4.53□□□□□ -1.68
RGPD6-201ENST00000329516 SUPT5HO00267 1087 aaKnown RBP4.53□□□□□ -1.68
RGPD6-201ENST00000329516 PREX2Q70Z35 1606 aa4.53□□□□□ -1.68
RGPD6-201ENST00000329516 MYO3AQ8NEV4 1616 aa4.52□□□□□ -1.69
RGPD6-201ENST00000329516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.52□□□□□ -1.69
RGPD6-201ENST00000329516 KNDC1Q76NI1 1749 aa4.52□□□□□ -1.69
RGPD6-201ENST00000329516 ADAMTSL3P82987 1691 aa4.52□□□□□ -1.69
RGPD6-201ENST00000329516 MYO5BQ9ULV0 1848 aa4.52□□□□□ -1.69
RGPD6-201ENST00000329516 MSH5O43196 834 aa4.52□□□□□ -1.69
RGPD6-201ENST00000329516 ZCCHC11Q5TAX3 1644 aaKnown RBP4.52□□□□□ -1.69
RGPD6-201ENST00000329516 KIDINS220Q9ULH0 1771 aa4.52□□□□□ -1.69
RGPD6-201ENST00000329516 KIAA0586Q9BVV6 1533 aa4.52□□□□□ -1.69
RGPD6-201ENST00000329516 NRXN1Q9ULB1 1477 aa4.51□□□□□ -1.69
RGPD6-201ENST00000329516 RNF123Q5XPI4 1314 aa4.51□□□□□ -1.69
RGPD6-201ENST00000329516 LAMC1P11047 1609 aa4.51□□□□□ -1.69
RGPD6-201ENST00000329516 MED14O60244 1454 aa4.5□□□□□ -1.69
RGPD6-201ENST00000329516 ADGRL2O95490 1459 aa4.5□□□□□ -1.69
RGPD6-201ENST00000329516 CDK13Q14004 1512 aaKnown RBP4.5□□□□□ -1.69
RGPD6-201ENST00000329516 TET3O43151 1660 aa4.49□□□□□ -1.69
RGPD6-201ENST00000329516 SYNJ2O15056 1496 aa4.49□□□□□ -1.69
RGPD6-201ENST00000329516 ATP10AO60312 1499 aa4.49□□□□□ -1.69
RGPD6-201ENST00000329516 CHD1O14646 1710 aa4.49□□□□□ -1.69
RGPD6-201ENST00000329516 PREX1Q8TCU6 1659 aa4.49□□□□□ -1.69
RGPD6-201ENST00000329516 BSNQ9UPA5 3926 aa4.49□□□□□ -1.69
RGPD6-201ENST00000329516 TNRC18O15417 2968 aaPredicted RBP4.49□□□□□ -1.69
RGPD6-201ENST00000329516 CADPSQ9ULU8 1353 aa4.49□□□□□ -1.69
RGPD6-201ENST00000329516 DDX60Q8IY21 1712 aaKnown RBP4.49□□□□□ -1.69
RGPD6-201ENST00000329516 CAMSAP2Q08AD1 1489 aa4.49□□□□□ -1.69
RGPD6-201ENST00000329516 VPS13CQ709C8 3753 aa4.48□□□□□ -1.69
RGPD6-201ENST00000329516 RTEL1-TNFRSF6BF6WH68 1400 aa4.48□□□□□ -1.69
RGPD6-201ENST00000329516 MAP3K4Q9Y6R4 1608 aa4.48□□□□□ -1.69
RGPD6-201ENST00000329516 HFM1A2PYH4 1435 aa4.48□□□□□ -1.69
RGPD6-201ENST00000329516 NEURL4Q96JN8 1562 aa4.48□□□□□ -1.69
RGPD6-201ENST00000329516 MADDQ8WXG6 1647 aa4.47□□□□□ -1.69
RGPD6-201ENST00000329516 MAST1Q9Y2H9 1570 aa4.47□□□□□ -1.69
RGPD6-201ENST00000329516 RGPD1P0DJD0 1748 aa4.47□□□□□ -1.69
RGPD6-201ENST00000329516 AKNAQ7Z591 1439 aa4.47□□□□□ -1.69
RGPD6-201ENST00000329516 ADGRB3O60242 1522 aa4.47□□□□□ -1.69
RGPD6-201ENST00000329516 MGAQ8IWI9 3026 aa4.47□□□□□ -1.69
RGPD6-201ENST00000329516 FAM9AQ8IZU1 332 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms