RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 SCAPERQ9BY12 1400 aa38.1■■■■□ 3.69
TMEM54-201ENST00000329151 MAGI2Q86UL8 1455 aa38.09■■■■□ 3.69
TMEM54-201ENST00000329151 ILDR1Q86SU0 546 aaPredicted RBP38.08■■■■□ 3.69
TMEM54-201ENST00000329151 RIMS1Q86UR5 1692 aaKnown RBP38.07■■■■□ 3.68
TMEM54-201ENST00000329151 TROQ12816 1431 aaPredicted RBP38.04■■■■□ 3.68
TMEM54-201ENST00000329151 YEATS2Q9ULM3 1422 aa38.01■■■■□ 3.68
TMEM54-201ENST00000329151 ARHGAP5Q13017 1502 aa38■■■■□ 3.67
TMEM54-201ENST00000329151 LRRIQ1Q96JM4 1722 aa37.98■■■■□ 3.67
TMEM54-201ENST00000329151 PLPPR3Q6T4P5 718 aa37.96■■■■□ 3.67
TMEM54-201ENST00000329151 MLECQ14165 292 aa37.95■■■■□ 3.67
TMEM54-201ENST00000329151 MYT1LQ9UL68 1186 aa37.95■■■■□ 3.67
TMEM54-201ENST00000329151 CCDC18Q5T9S5 1454 aa37.95■■■■□ 3.67
TMEM54-201ENST00000329151 PCF11O94913 1555 aaKnown RBP37.92■■■■□ 3.66
TMEM54-201ENST00000329151 CASKIN1Q8WXD9 1431 aa37.91■■■■□ 3.66
TMEM54-201ENST00000329151 ZNF518AQ6AHZ1 1483 aa37.9■■■■□ 3.66
TMEM54-201ENST00000329151 FER1L4A9Z1Z3 1794 aa37.89■■■■□ 3.66
TMEM54-201ENST00000329151 ATP10AO60312 1499 aa37.88■■■■□ 3.65
TMEM54-201ENST00000329151 C9orf84Q5VXU9 1444 aa37.86■■■■□ 3.65
TMEM54-201ENST00000329151 SIGLEC1Q9BZZ2 1709 aa37.85■■■■□ 3.65
TMEM54-201ENST00000329151 CDC42BPBQ9Y5S2 1711 aa37.81■■■■□ 3.64
TMEM54-201ENST00000329151 LMTK3Q96Q04 1460 aa37.8■■■■□ 3.64
TMEM54-201ENST00000329151 FYCO1Q9BQS8 1478 aa37.79■■■■□ 3.64
TMEM54-201ENST00000329151 PREX2Q70Z35 1606 aa37.78■■■■□ 3.64
TMEM54-201ENST00000329151 AFAP1Q8N556 730 aa37.77■■■■□ 3.64
TMEM54-201ENST00000329151 KDM5CP41229 1560 aa37.75■■■■□ 3.63
TMEM54-201ENST00000329151 ARHGEF12Q9NZN5 1544 aa37.69■■■■□ 3.62
TMEM54-201ENST00000329151 CDC42BPAQ5VT25 1732 aa37.67■■■■□ 3.62
TMEM54-201ENST00000329151 ABCC1P33527 1531 aa37.66■■■■□ 3.62
TMEM54-201ENST00000329151 ITSN2Q9NZM3 1697 aa37.66■■■■□ 3.62
TMEM54-201ENST00000329151 DIP2CQ9Y2E4 1556 aa37.64■■■■□ 3.62
TMEM54-201ENST00000329151 HSPA2P54652 639 aa37.64■■■■□ 3.62
TMEM54-201ENST00000329151 ZNF777Q9ULD5 760 aaPredicted RBP37.62■■■■□ 3.61
TMEM54-201ENST00000329151 MLH3Q9UHC1 1453 aa37.62■■■■□ 3.61
TMEM54-201ENST00000329151 ESF1Q9H501 851 aaKnown RBP37.61■■■■□ 3.61
TMEM54-201ENST00000329151 ABCA6Q8N139 1617 aa37.58■■■■□ 3.61
TMEM54-201ENST00000329151 FBXO41Q8TF61 875 aa37.58■■■■□ 3.61
TMEM54-201ENST00000329151 TRAPPC8Q9Y2L5 1435 aa37.58■■■■□ 3.61
TMEM54-201ENST00000329151 REREQ9P2R6 1566 aa37.57■■■■□ 3.6
TMEM54-201ENST00000329151 PREX1Q8TCU6 1659 aa37.56■■■■□ 3.6
TMEM54-201ENST00000329151 CEBPAP49715 358 aaPredicted RBP37.51■■■■□ 3.6
TMEM54-201ENST00000329151 MTUS2Q5JR59 1369 aa37.5■■■■□ 3.59
TMEM54-201ENST00000329151 SETD1BQ9UPS6 1966 aaKnown RBP37.48■■■■□ 3.59
TMEM54-201ENST00000329151 KIDINS220Q9ULH0 1771 aa37.47■■■■□ 3.59
TMEM54-201ENST00000329151 CCNB3Q8WWL7 1395 aa37.47■■■■□ 3.59
TMEM54-201ENST00000329151 CFDP1Q9UEE9 299 aaPredicted RBP37.46■■■■□ 3.59
TMEM54-201ENST00000329151 SAMD9LQ8IVG5 1584 aa37.46■■■■□ 3.59
TMEM54-201ENST00000329151 AGLP35573 1532 aa37.46■■■■□ 3.59
TMEM54-201ENST00000329151 GPATCH8Q9UKJ3 1502 aaKnown RBP37.46■■■■□ 3.59
TMEM54-201ENST00000329151 SYCP2Q9BX26 1530 aa37.45■■■■□ 3.59
TMEM54-201ENST00000329151 SPAG9O60271 1321 aaKnown RBP37.43■■■■□ 3.58
TMEM54-201ENST00000329151 PLEKHH2Q8IVE3 1493 aa37.42■■■■□ 3.58
TMEM54-201ENST00000329151 UHRF1BP1Q6BDS2 1440 aa37.42■■■■□ 3.58
TMEM54-201ENST00000329151 HNRNPMP52272 730 aaKnown RBP eCLIP37.39■■■■□ 3.58
TMEM54-201ENST00000329151 C3P01024 1663 aa37.37■■■■□ 3.57
TMEM54-201ENST00000329151 CNTLNQ9NXG0 1405 aa37.34■■■■□ 3.57
TMEM54-201ENST00000329151 KIAA1107Q9UPP5 1409 aa37.33■■■■□ 3.57
TMEM54-201ENST00000329151 EHBP1L1Q8N3D4 1523 aa37.32■■■■□ 3.57
TMEM54-201ENST00000329151 SUPT6HQ7KZ85 1726 aaKnown RBP37.31■■■■□ 3.56
TMEM54-201ENST00000329151 CEP162Q5TB80 1403 aa37.31■■■■□ 3.56
TMEM54-201ENST00000329151 DMRT2Q9Y5R5 561 aa37.31■■■■□ 3.56
TMEM54-201ENST00000329151 ATP7AQ04656 1500 aa37.31■■■■□ 3.56
TMEM54-201ENST00000329151 INO80Q9ULG1 1556 aaPredicted RBP37.23■■■■□ 3.55
TMEM54-201ENST00000329151 TIAM1Q13009 1591 aa37.22■■■■□ 3.55
TMEM54-201ENST00000329151 CERKQ8TCT0 537 aa37.21■■■■□ 3.55
TMEM54-201ENST00000329151 MROH2AA6NES4 1674 aa37.2■■■■□ 3.55
TMEM54-201ENST00000329151 A2MP01023 1474 aa37.2■■■■□ 3.54
TMEM54-201ENST00000329151 STRCQ7RTU9 1775 aa37.18■■■■□ 3.54
TMEM54-201ENST00000329151 ADGBQ8N7X0 1667 aa37.16■■■■□ 3.54
TMEM54-201ENST00000329151 CLTCQ00610 1675 aaKnown RBP37.12■■■■□ 3.53
TMEM54-201ENST00000329151 GGT6Q6P531 493 aa37.12■■■■□ 3.53
TMEM54-201ENST00000329151 PLXNC1O60486 1568 aa37.12■■■■□ 3.53
TMEM54-201ENST00000329151 ZNF644Q9H582 1327 aaPredicted RBP37.11■■■■□ 3.53
TMEM54-201ENST00000329151 ZMYM3Q14202 1370 aa37.1■■■■□ 3.53
TMEM54-201ENST00000329151 NPATQ14207 1427 aa37.1■■■■□ 3.53
TMEM54-201ENST00000329151 NCOA2Q15596 1464 aa37.04■■■■□ 3.52
TMEM54-201ENST00000329151 RTEL1-TNFRSF6BF6WH68 1400 aa37.02■■■■□ 3.52
TMEM54-201ENST00000329151 PTPRTO14522 1441 aa37.02■■■■□ 3.52
TMEM54-201ENST00000329151 MBD5Q9P267 1494 aa37.01■■■■□ 3.52
TMEM54-201ENST00000329151 PPP6R1Q9UPN7 881 aa37■■■■□ 3.51
TMEM54-201ENST00000329151 CCDC141Q6ZP82 1450 aa36.99■■■■□ 3.51
TMEM54-201ENST00000329151 CAMSAP2Q08AD1 1489 aa36.98■■■■□ 3.51
TMEM54-201ENST00000329151 RSPH4AQ5TD94 716 aa36.97■■■■□ 3.51
TMEM54-201ENST00000329151 NCOA1Q15788 1441 aa36.96■■■■□ 3.51
TMEM54-201ENST00000329151 CAMSAP1Q5T5Y3 1602 aa36.96■■■■□ 3.51
TMEM54-201ENST00000329151 VPS8Q8N3P4 1428 aa36.93■■■■□ 3.5
TMEM54-201ENST00000329151 DHX29Q7Z478 1369 aaKnown RBP36.92■■■■□ 3.5
TMEM54-201ENST00000329151 MYO3AQ8NEV4 1616 aa36.92■■■■□ 3.5
TMEM54-201ENST00000329151 LOC105371045A0A1W2PR82 267 aa36.9■■■■□ 3.5
TMEM54-201ENST00000329151 TSPY4P0CV99 314 aa36.89■■■■□ 3.5
TMEM54-201ENST00000329151 TSPY10P0CW01 314 aa36.89■■■■□ 3.5
TMEM54-201ENST00000329151 PTPRKQ15262 1439 aa36.88■■■■□ 3.49
TMEM54-201ENST00000329151 ZNF142P52746 1687 aaPredicted RBP36.88■■■■□ 3.49
TMEM54-201ENST00000329151 KIF3BO15066 747 aa36.87■■■■□ 3.49
TMEM54-201ENST00000329151 LRRC9Q6ZRR7 1453 aa36.85■■■■□ 3.49
TMEM54-201ENST00000329151 CEP170BQ9Y4F5 1589 aaPredicted RBP36.85■■■■□ 3.49
TMEM54-201ENST00000329151 ARHGEF5Q12774 1597 aa36.82■■■■□ 3.48
TMEM54-201ENST00000329151 NCKAP5LQ9HCH0 1330 aa36.8■■■■□ 3.48
TMEM54-201ENST00000329151 PKD2Q13563 968 aa36.79■■■■□ 3.48
TMEM54-201ENST00000329151 KDM5DQ9BY66 1539 aa36.77■■■■□ 3.48
TMEM54-201ENST00000329151 WASHC2CQ9Y4E1 1318 aa36.77■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms