RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 AQRO60306 1485 aaKnown RBP eCLIP18.07■□□□□ 0.488e-7■■■■□ 22.3
DNMT3B-202ENST00000328111 ST20-MTHFSA0A0A6YYL1 179 aa18.07■□□□□ 0.48
DNMT3B-202ENST00000328111 CFAP53Q96M91 514 aa18.07■□□□□ 0.48
DNMT3B-202ENST00000328111 UACAQ9BZF9 1416 aa18.06■□□□□ 0.48
DNMT3B-202ENST00000328111 HSP90AA1P07900 732 aaKnown RBP18.06■□□□□ 0.48
DNMT3B-202ENST00000328111 KTN1Q86UP2 1357 aaKnown RBP18.05■□□□□ 0.48
DNMT3B-202ENST00000328111 PPM1GO15355 546 aaPredicted RBP18.04■□□□□ 0.48
DNMT3B-202ENST00000328111 HMGXB3Q12766 1538 aa18.04■□□□□ 0.48
DNMT3B-202ENST00000328111 RGS3P49796 1198 aa18.04■□□□□ 0.48
DNMT3B-202ENST00000328111 GGT6Q6P531 493 aa18.03■□□□□ 0.48
DNMT3B-202ENST00000328111 NCOA2Q15596 1464 aa18.03■□□□□ 0.48
DNMT3B-202ENST00000328111 RALBP1Q15311 655 aa18.02■□□□□ 0.48
DNMT3B-202ENST00000328111 ERICH6BQ5W0A0 696 aa18.02■□□□□ 0.47
DNMT3B-202ENST00000328111 FRAT1Q92837 279 aaPredicted RBP18.02■□□□□ 0.47
DNMT3B-202ENST00000328111 KANK1Q14678 1352 aa18■□□□□ 0.47
DNMT3B-202ENST00000328111 RSPH4AQ5TD94 716 aa17.99■□□□□ 0.47
DNMT3B-202ENST00000328111 RCAN3Q9UKA8 241 aa17.99■□□□□ 0.47
DNMT3B-202ENST00000328111 NUDCQ9Y266 331 aa17.99■□□□□ 0.47
DNMT3B-202ENST00000328111 POLA1P09884 1462 aaPredicted RBP17.99■□□□□ 0.47
DNMT3B-202ENST00000328111 SAFB2Q14151 953 aaKnown RBP eCLIP17.98■□□□□ 0.47
DNMT3B-202ENST00000328111 NOP58Q9Y2X3 529 aaKnown RBP17.98■□□□□ 0.47
DNMT3B-202ENST00000328111 KIF3BO15066 747 aa17.98■□□□□ 0.47
DNMT3B-202ENST00000328111 FYCO1Q9BQS8 1478 aa17.98■□□□□ 0.47
DNMT3B-202ENST00000328111 POGKQ9P215 609 aa17.97■□□□□ 0.47
DNMT3B-202ENST00000328111 NLRP13Q86W25 1043 aa17.97■□□□□ 0.47
DNMT3B-202ENST00000328111 TOPBP1Q92547 1522 aa17.96■□□□□ 0.47
DNMT3B-202ENST00000328111 USP47Q96K76 1375 aa17.96■□□□□ 0.47
DNMT3B-202ENST00000328111 ARXQ96QS3 562 aa17.96■□□□□ 0.47
DNMT3B-202ENST00000328111 LAS1LQ9Y4W2 734 aaKnown RBP17.96■□□□□ 0.47
DNMT3B-202ENST00000328111 DDRGK1Q96HY6 314 aa17.96■□□□□ 0.47
DNMT3B-202ENST00000328111 WASHC2AQ641Q2 1341 aa17.95■□□□□ 0.46
DNMT3B-202ENST00000328111 U2SURPO15042 1029 aaKnown RBP17.95■□□□□ 0.46
DNMT3B-202ENST00000328111 PTPRGP23470 1445 aa17.94■□□□□ 0.46
DNMT3B-202ENST00000328111 TIAM1Q13009 1591 aa17.94■□□□□ 0.46
DNMT3B-202ENST00000328111 SPAG9O60271 1321 aaKnown RBP17.93■□□□□ 0.46
DNMT3B-202ENST00000328111 MORC1Q86VD1 984 aa17.93■□□□□ 0.46
DNMT3B-202ENST00000328111 FTSJ3Q8IY81 847 aaKnown RBP17.93■□□□□ 0.46
DNMT3B-202ENST00000328111 KIF7Q2M1P5 1343 aa17.92■□□□□ 0.46
DNMT3B-202ENST00000328111 MAPK8IP3Q9UPT6 1336 aa17.91■□□□□ 0.46
DNMT3B-202ENST00000328111 CCDC7Q96M83 1385 aa17.9■□□□□ 0.46
DNMT3B-202ENST00000328111 CCDC144AA2RUR9 1427 aa17.9■□□□□ 0.46
DNMT3B-202ENST00000328111 PEG3Q9GZU2 1588 aa17.9■□□□□ 0.46
DNMT3B-202ENST00000328111 CC2D2AQ9P2K1 1620 aa17.9■□□□□ 0.46
DNMT3B-202ENST00000328111 DNAJC5BQ9UF47 199 aa17.89■□□□□ 0.45
DNMT3B-202ENST00000328111 ZBED9Q6R2W3 1325 aa17.89■□□□□ 0.45
DNMT3B-202ENST00000328111 PANK3Q9H999 370 aa17.89■□□□□ 0.45
DNMT3B-202ENST00000328111 STK26Q9P289 416 aa17.89■□□□□ 0.45
DNMT3B-202ENST00000328111 SRPK2P78362 688 aaKnown RBP17.89■□□□□ 0.45
DNMT3B-202ENST00000328111 KIF15Q9NS87 1388 aa17.87■□□□□ 0.45
DNMT3B-202ENST00000328111 PLEKHG5O94827 1062 aa17.87■□□□□ 0.45
DNMT3B-202ENST00000328111 MYBBP1AQ9BQG0 1328 aaKnown RBP17.87■□□□□ 0.45
DNMT3B-202ENST00000328111 MYH16Q9H6N6 1097 aa17.86■□□□□ 0.45
DNMT3B-202ENST00000328111 BECN1Q14457 450 aa17.86■□□□□ 0.45
DNMT3B-202ENST00000328111 ARID4BQ4LE39 1312 aaPredicted RBP17.86■□□□□ 0.45
DNMT3B-202ENST00000328111 HFM1A2PYH4 1435 aa17.85■□□□□ 0.45
DNMT3B-202ENST00000328111 EFCAB5A4FU69 1503 aa17.85■□□□□ 0.45
DNMT3B-202ENST00000328111 NBPF8Q3BBV2 869 aa17.84■□□□□ 0.45
DNMT3B-202ENST00000328111 MLECQ14165 292 aa17.84■□□□□ 0.45
DNMT3B-202ENST00000328111 GRIN2BQ13224 1484 aa17.84■□□□□ 0.45
DNMT3B-202ENST00000328111 WDR97A6NE52 1622 aa17.84■□□□□ 0.45
DNMT3B-202ENST00000328111 UNC13AQ9UPW8 1703 aa17.84■□□□□ 0.45
DNMT3B-202ENST00000328111 ANKRD50Q9ULJ7 1429 aa17.83■□□□□ 0.44
DNMT3B-202ENST00000328111 CCDC146Q8IYE0 955 aa17.83■□□□□ 0.44
DNMT3B-202ENST00000328111 EIF5BO60841 1220 aaKnown RBP17.82■□□□□ 0.44
DNMT3B-202ENST00000328111 C14orf37Q86TY3 774 aa17.81■□□□□ 0.44
DNMT3B-202ENST00000328111 NUTM2DQ5VT03 806 aaPredicted RBP17.81■□□□□ 0.44
DNMT3B-202ENST00000328111 PDE3BQ13370 1112 aa17.81■□□□□ 0.44
DNMT3B-202ENST00000328111 CNTLNQ9NXG0 1405 aa17.8■□□□□ 0.44
DNMT3B-202ENST00000328111 PRDM2Q13029 1718 aa17.8■□□□□ 0.44
DNMT3B-202ENST00000328111 U2AF1L5P0DN76 240 aaPredicted RBP17.79■□□□□ 0.44
DNMT3B-202ENST00000328111 U2AF1Q01081 240 aaKnown RBP eCLIP17.79■□□□□ 0.446e-10■■■■□ 19.3
DNMT3B-202ENST00000328111 GOLGA2Q08379 1002 aa17.79■□□□□ 0.44
DNMT3B-202ENST00000328111 NAIPQ13075 1403 aa17.79■□□□□ 0.44
DNMT3B-202ENST00000328111 DNMBPQ6XZF7 1577 aa17.78■□□□□ 0.44
DNMT3B-202ENST00000328111 ABCA10Q8WWZ4 1543 aa17.78■□□□□ 0.44
DNMT3B-202ENST00000328111 PLIN1O60240 522 aa17.78■□□□□ 0.44
DNMT3B-202ENST00000328111 TRAK1Q9UPV9 953 aa17.78■□□□□ 0.44
DNMT3B-202ENST00000328111 ZBTB7CA1YPR0 619 aa17.78■□□□□ 0.44
DNMT3B-202ENST00000328111 TCERG1O14776 1098 aaKnown RBP17.77■□□□□ 0.44
DNMT3B-202ENST00000328111 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.76■□□□□ 0.433e-7■■■■□ 22
DNMT3B-202ENST00000328111 ANP32BQ92688 251 aaKnown RBP17.76■□□□□ 0.43
DNMT3B-202ENST00000328111 PRG4Q92954 1404 aaPredicted RBP17.76■□□□□ 0.43
DNMT3B-202ENST00000328111 CCDC184Q52MB2 194 aa17.76■□□□□ 0.43
DNMT3B-202ENST00000328111 EXOC6Q8TAG9 804 aa17.75■□□□□ 0.43
DNMT3B-202ENST00000328111 PCF11O94913 1555 aaKnown RBP17.75■□□□□ 0.43
DNMT3B-202ENST00000328111 WASHC2CQ9Y4E1 1318 aa17.74■□□□□ 0.43
DNMT3B-202ENST00000328111 EIF3AQ14152 1382 aaKnown RBP17.74■□□□□ 0.43
DNMT3B-202ENST00000328111 MIA2Q96PC5 1412 aa17.73■□□□□ 0.43
DNMT3B-202ENST00000328111 EHBP1L1Q8N3D4 1523 aa17.73■□□□□ 0.43
DNMT3B-202ENST00000328111 SOX12O15370 315 aa17.73■□□□□ 0.43
DNMT3B-202ENST00000328111 DEKP35659 375 aaKnown RBP17.71■□□□□ 0.43
DNMT3B-202ENST00000328111 RRP1P56182 461 aaKnown RBP17.71■□□□□ 0.43
DNMT3B-202ENST00000328111 MS4A1P11836 297 aa17.71■□□□□ 0.42
DNMT3B-202ENST00000328111 BIVM-ERCC5R4GMW8 1640 aa17.7■□□□□ 0.42
DNMT3B-202ENST00000328111 CLUAP1Q96AJ1 413 aa17.69■□□□□ 0.42
DNMT3B-202ENST00000328111 CDK13Q14004 1512 aaKnown RBP17.69■□□□□ 0.42
DNMT3B-202ENST00000328111 IPO9Q96P70 1041 aaKnown RBP17.68■□□□□ 0.42
DNMT3B-202ENST00000328111 NBPF1Q3BBV0 1214 aa17.68■□□□□ 0.42
DNMT3B-202ENST00000328111 RRP7AQ9Y3A4 280 aaKnown RBP17.68■□□□□ 0.42
DNMT3B-202ENST00000328111 PNNQ9H307 717 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms