RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 TCOF1Q13428 1488 aaKnown RBP22.89■■□□□ 1.25
SHISA2-201ENST00000319420 DAPK1P53355 1430 aa22.87■■□□□ 1.25
SHISA2-201ENST00000319420 ABCC5O15440 1437 aa22.87■■□□□ 1.25
SHISA2-201ENST00000319420 ERCC6L2Q5T890 1561 aa22.87■■□□□ 1.25
SHISA2-201ENST00000319420 KDM6BO15054 1643 aa22.86■■□□□ 1.25
SHISA2-201ENST00000319420 HNRNPMP52272 730 aaKnown RBP eCLIP22.86■■□□□ 1.25
SHISA2-201ENST00000319420 MPHOSPH9Q99550 1183 aa22.86■■□□□ 1.25
SHISA2-201ENST00000319420 GPATCH8Q9UKJ3 1502 aaKnown RBP22.85■■□□□ 1.25
SHISA2-201ENST00000319420 PPP1R15AO75807 674 aaPredicted RBP22.83■■□□□ 1.25
SHISA2-201ENST00000319420 CENPBP07199 599 aaPredicted RBP22.83■■□□□ 1.25
SHISA2-201ENST00000319420 SLC4A1APQ9BWU0 796 aaKnown RBP22.82■■□□□ 1.24
SHISA2-201ENST00000319420 CAMSAP2Q08AD1 1489 aa22.81■■□□□ 1.24
SHISA2-201ENST00000319420 ABCA8O94911 1581 aa22.8■■□□□ 1.24
SHISA2-201ENST00000319420 DDX10Q13206 875 aaKnown RBP22.79■■□□□ 1.24
SHISA2-201ENST00000319420 TSPY4P0CV99 314 aa22.74■■□□□ 1.23
SHISA2-201ENST00000319420 TSPY10P0CW01 314 aa22.74■■□□□ 1.23
SHISA2-201ENST00000319420 GTF3C3Q9Y5Q9 886 aa22.72■■□□□ 1.23
SHISA2-201ENST00000319420 DENND4BO75064 1496 aaPredicted RBP22.69■■□□□ 1.22
SHISA2-201ENST00000319420 AKNAQ7Z591 1439 aa22.68■■□□□ 1.22
SHISA2-201ENST00000319420 DNMT1P26358 1616 aaKnown RBP22.68■■□□□ 1.22
SHISA2-201ENST00000319420 TIMELESSQ9UNS1 1208 aa22.68■■□□□ 1.22
SHISA2-201ENST00000319420 NCOA1Q15788 1441 aa22.67■■□□□ 1.22
SHISA2-201ENST00000319420 L3MBTL2Q969R5 705 aa22.67■■□□□ 1.22
SHISA2-201ENST00000319420 ZNF326Q5BKZ1 582 aaKnown RBP22.66■■□□□ 1.22
SHISA2-201ENST00000319420 ROCK1Q13464 1354 aa22.66■■□□□ 1.22
SHISA2-201ENST00000319420 ABCC10Q5T3U5 1492 aa22.64■■□□□ 1.22
SHISA2-201ENST00000319420 ANKRD30AQ9BXX3 1397 aa22.64■■□□□ 1.22
SHISA2-201ENST00000319420 GCC2Q8IWJ2 1684 aa22.64■■□□□ 1.21
SHISA2-201ENST00000319420 PKD2Q13563 968 aa22.63■■□□□ 1.21
SHISA2-201ENST00000319420 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.63■■□□□ 1.21
SHISA2-201ENST00000319420 ITSN2Q9NZM3 1697 aa22.61■■□□□ 1.21
SHISA2-201ENST00000319420 C9orf84Q5VXU9 1444 aa22.6■■□□□ 1.21
SHISA2-201ENST00000319420 CDC42BPAQ5VT25 1732 aa22.59■■□□□ 1.21
SHISA2-201ENST00000319420 ANKRD50Q9ULJ7 1429 aa22.59■■□□□ 1.21
SHISA2-201ENST00000319420 NUP155O75694 1391 aa22.58■■□□□ 1.21
SHISA2-201ENST00000319420 ADCY10Q96PN6 1610 aa22.57■■□□□ 1.2
SHISA2-201ENST00000319420 SHROOM2Q13796 1616 aa22.56■■□□□ 1.2
SHISA2-201ENST00000319420 ARHGAP5Q13017 1502 aa22.55■■□□□ 1.2
SHISA2-201ENST00000319420 KIF15Q9NS87 1388 aa22.55■■□□□ 1.2
SHISA2-201ENST00000319420 ABCC2Q92887 1545 aa22.54■■□□□ 1.2
SHISA2-201ENST00000319420 MYT1LQ9UL68 1186 aa22.54■■□□□ 1.2
SHISA2-201ENST00000319420 ANKRD30BQ9BXX2 1392 aa22.54■■□□□ 1.2
SHISA2-201ENST00000319420 HSPA5P11021 654 aaKnown RBP22.51■■□□□ 1.19
SHISA2-201ENST00000319420 CLASP1Q7Z460 1538 aa22.51■■□□□ 1.19
SHISA2-201ENST00000319420 TTC37Q6PGP7 1564 aa22.51■■□□□ 1.19
SHISA2-201ENST00000319420 NBPF8Q3BBV2 869 aa22.5■■□□□ 1.19
SHISA2-201ENST00000319420 OSCARQ8IYS5 282 aa22.5■■□□□ 1.19
SHISA2-201ENST00000319420 KDM5BQ9UGL1 1544 aa22.49■■□□□ 1.19
SHISA2-201ENST00000319420 KDM2AQ9Y2K7 1162 aa22.48■■□□□ 1.19
SHISA2-201ENST00000319420 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.48■■□□□ 1.19
SHISA2-201ENST00000319420 PZPP20742 1482 aa22.48■■□□□ 1.19
SHISA2-201ENST00000319420 SYCP2Q9BX26 1530 aa22.47■■□□□ 1.19
SHISA2-201ENST00000319420 MBD5Q9P267 1494 aa22.47■■□□□ 1.19
SHISA2-201ENST00000319420 CNGB1Q14028 1251 aaPredicted RBP22.47■■□□□ 1.19
SHISA2-201ENST00000319420 AFAP1Q8N556 730 aa22.46■■□□□ 1.19
SHISA2-201ENST00000319420 SAMD9LQ8IVG5 1584 aa22.46■■□□□ 1.19
SHISA2-201ENST00000319420 POLR3GLQ9BT43 218 aa22.45■■□□□ 1.18
SHISA2-201ENST00000319420 EFCAB2Q5VUJ9 269 aa22.44■■□□□ 1.18
SHISA2-201ENST00000319420 EIF4G2P78344 907 aaKnown RBP eCLIP22.43■■□□□ 1.18
SHISA2-201ENST00000319420 CDC42BPBQ9Y5S2 1711 aa22.43■■□□□ 1.18
SHISA2-201ENST00000319420 ADGRL2O95490 1459 aa22.43■■□□□ 1.18
SHISA2-201ENST00000319420 CCDC141Q6ZP82 1450 aa22.43■■□□□ 1.18
SHISA2-201ENST00000319420 RGL3Q3MIN7 710 aa22.41■■□□□ 1.18
SHISA2-201ENST00000319420 ZCCHC11Q5TAX3 1644 aaKnown RBP22.4■■□□□ 1.18
SHISA2-201ENST00000319420 RPRD2Q5VT52 1461 aaKnown RBP22.4■■□□□ 1.18
SHISA2-201ENST00000319420 ADGBQ8N7X0 1667 aa22.39■■□□□ 1.18
SHISA2-201ENST00000319420 KIAA1107Q9UPP5 1409 aa22.39■■□□□ 1.18
SHISA2-201ENST00000319420 CROCC2H7BZ55 1655 aa22.39■■□□□ 1.17
SHISA2-201ENST00000319420 PREX2Q70Z35 1606 aa22.37■■□□□ 1.17
SHISA2-201ENST00000319420 ANP32CO43423 234 aa22.37■■□□□ 1.17
SHISA2-201ENST00000319420 NPM1P06748 294 aaKnown RBP eCLIP22.36■■□□□ 1.17
SHISA2-201ENST00000319420 RSPH4AQ5TD94 716 aa22.36■■□□□ 1.17
SHISA2-201ENST00000319420 C11orf95C9JLR9 678 aaPredicted RBP22.35■■□□□ 1.17
SHISA2-201ENST00000319420 ARHGEF12Q9NZN5 1544 aa22.35■■□□□ 1.17
SHISA2-201ENST00000319420 WASHC2AQ641Q2 1341 aa22.34■■□□□ 1.17
SHISA2-201ENST00000319420 SHANK2Q9UPX8 1470 aa22.34■■□□□ 1.17
SHISA2-201ENST00000319420 DCAF11Q8TEB1 546 aa22.34■■□□□ 1.17
SHISA2-201ENST00000319420 PLCH2O75038 1416 aa22.33■■□□□ 1.17
SHISA2-201ENST00000319420 TRAPPC8Q9Y2L5 1435 aa22.33■■□□□ 1.16
SHISA2-201ENST00000319420 PLEKHH2Q8IVE3 1493 aa22.31■■□□□ 1.16
SHISA2-201ENST00000319420 SPAG9O60271 1321 aaKnown RBP22.31■■□□□ 1.16
SHISA2-201ENST00000319420 TEX14Q8IWB6 1497 aa22.3■■□□□ 1.16
SHISA2-201ENST00000319420 UHRF1BP1LA0JNW5 1464 aa22.28■■□□□ 1.16
SHISA2-201ENST00000319420 ARHGEF5Q12774 1597 aa22.28■■□□□ 1.16
SHISA2-201ENST00000319420 MYO5CQ9NQX4 1742 aa22.28■■□□□ 1.16
SHISA2-201ENST00000319420 ASXL2Q76L83 1435 aa22.25■■□□□ 1.15
SHISA2-201ENST00000319420 WDR7Q9Y4E6 1490 aa22.25■■□□□ 1.15
SHISA2-201ENST00000319420 CYB5RLQ6IPT4 315 aa22.24■■□□□ 1.15
SHISA2-201ENST00000319420 CARD11Q9BXL7 1154 aa22.21■■□□□ 1.15
SHISA2-201ENST00000319420 FAM135AQ9P2D6 1515 aa22.21■■□□□ 1.15
SHISA2-201ENST00000319420 FANCAO15360 1455 aa22.2■■□□□ 1.14
SHISA2-201ENST00000319420 SCAPERQ9BY12 1400 aa22.19■■□□□ 1.14
SHISA2-201ENST00000319420 KIF3BO15066 747 aa22.19■■□□□ 1.14
SHISA2-201ENST00000319420 CCDC144AA2RUR9 1427 aa22.17■■□□□ 1.14
SHISA2-201ENST00000319420 USP47Q96K76 1375 aa22.16■■□□□ 1.14
SHISA2-201ENST00000319420 KIF7Q2M1P5 1343 aa22.16■■□□□ 1.14
SHISA2-201ENST00000319420 ABCC1P33527 1531 aa22.14■■□□□ 1.13
SHISA2-201ENST00000319420 CCDC7Q96M83 1385 aa22.13■■□□□ 1.13
SHISA2-201ENST00000319420 ADGRL1O94910 1474 aa22.12■■□□□ 1.13
SHISA2-201ENST00000319420 ST20-MTHFSA0A0A6YYL1 179 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms