RNA–Protein interactions for RNA: ENST00000319394.7

WDTC1-201, Transcript of WD and tetratricopeptide repeats 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene WDTC1, Length 4,819 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDTC1-201ENST00000319394 ROCK2O75116 1388 aaKnown RBP24.24■■□□□ 1.47
WDTC1-201ENST00000319394 NEUROD2Q15784 382 aa24.23■■□□□ 1.47
WDTC1-201ENST00000319394 FANCIQ9NVI1 1328 aa24.23■■□□□ 1.47
WDTC1-201ENST00000319394 IPO9Q96P70 1041 aaKnown RBP24.22■■□□□ 1.47
WDTC1-201ENST00000319394 MYOM3Q5VTT5 1437 aa24.2■■□□□ 1.46
WDTC1-201ENST00000319394 RTN4Q9NQC3 1192 aaKnown RBP24.19■■□□□ 1.46
WDTC1-201ENST00000319394 NLRP13Q86W25 1043 aa24.18■■□□□ 1.46
WDTC1-201ENST00000319394 FRAT1Q92837 279 aaPredicted RBP24.18■■□□□ 1.46
WDTC1-201ENST00000319394 CASKIN1Q8WXD9 1431 aa24.17■■□□□ 1.46
WDTC1-201ENST00000319394 CARMIL2Q6F5E8 1435 aa24.16■■□□□ 1.46
WDTC1-201ENST00000319394 RAD54L2Q9Y4B4 1467 aa24.15■■□□□ 1.46
WDTC1-201ENST00000319394 PDE3BQ13370 1112 aa24.14■■□□□ 1.46
WDTC1-201ENST00000319394 FTSJ3Q8IY81 847 aaKnown RBP24.13■■□□□ 1.45
WDTC1-201ENST00000319394 CCDC7Q96M83 1385 aa24.13■■□□□ 1.45
WDTC1-201ENST00000319394 KIF15Q9NS87 1388 aa24.13■■□□□ 1.45
WDTC1-201ENST00000319394 ERCC6Q03468 1493 aa24.13■■□□□ 1.45
WDTC1-201ENST00000319394 CFTRP13569 1480 aa24.12■■□□□ 1.45
WDTC1-201ENST00000319394 CUX1P39880 1505 aa24.12■■□□□ 1.45
WDTC1-201ENST00000319394 WASHC2AQ641Q2 1341 aa24.12■■□□□ 1.45
WDTC1-201ENST00000319394 ESF1Q9H501 851 aaKnown RBP24.12■■□□□ 1.45
WDTC1-201ENST00000319394 MYH16Q9H6N6 1097 aa24.11■■□□□ 1.45
WDTC1-201ENST00000319394 ST20-MTHFSA0A0A6YYL1 179 aa24.11■■□□□ 1.45
WDTC1-201ENST00000319394 MYBBP1AQ9BQG0 1328 aaKnown RBP24.1■■□□□ 1.45
WDTC1-201ENST00000319394 TNNT2P45379 298 aaPredicted RBP24.1■■□□□ 1.45
WDTC1-201ENST00000319394 USP47Q96K76 1375 aa24.1■■□□□ 1.45
WDTC1-201ENST00000319394 CNTLNQ9NXG0 1405 aa24.1■■□□□ 1.45
WDTC1-201ENST00000319394 FYCO1Q9BQS8 1478 aa24.08■■□□□ 1.45
WDTC1-201ENST00000319394 TIAM1Q13009 1591 aa24.08■■□□□ 1.44
WDTC1-201ENST00000319394 NCOA2Q15596 1464 aa24.07■■□□□ 1.44
WDTC1-201ENST00000319394 SENP3Q9H4L4 574 aaPredicted RBP24.07■■□□□ 1.44
WDTC1-201ENST00000319394 KIF7Q2M1P5 1343 aa24.06■■□□□ 1.44
WDTC1-201ENST00000319394 GLIPR1L2Q4G1C9 344 aa24.05■■□□□ 1.44
WDTC1-201ENST00000319394 WDR97A6NE52 1622 aa24.05■■□□□ 1.44
WDTC1-201ENST00000319394 HNRNPMP52272 730 aaKnown RBP eCLIP24.04■■□□□ 1.44
WDTC1-201ENST00000319394 GAPVD1Q14C86 1478 aa24.03■■□□□ 1.44
WDTC1-201ENST00000319394 MAPK8IP3Q9UPT6 1336 aa24.01■■□□□ 1.43
WDTC1-201ENST00000319394 RRP1P56182 461 aaKnown RBP24■■□□□ 1.43
WDTC1-201ENST00000319394 EXOC6Q8TAG9 804 aa23.99■■□□□ 1.43
WDTC1-201ENST00000319394 MS4A1P11836 297 aa23.98■■□□□ 1.43
WDTC1-201ENST00000319394 KANK1Q14678 1352 aa23.97■■□□□ 1.43
WDTC1-201ENST00000319394 GOLGA2Q08379 1002 aa23.97■■□□□ 1.43
WDTC1-201ENST00000319394 MORC1Q86VD1 984 aa23.97■■□□□ 1.43
WDTC1-201ENST00000319394 TRIM44Q96DX7 344 aaPredicted RBP23.97■■□□□ 1.43
WDTC1-201ENST00000319394 HFM1A2PYH4 1435 aa23.96■■□□□ 1.43
WDTC1-201ENST00000319394 GOLGA6L22H0YM25 854 aa23.96■■□□□ 1.43
WDTC1-201ENST00000319394 PDE4AP27815 886 aa23.95■■□□□ 1.43
WDTC1-201ENST00000319394 RSPH4AQ5TD94 716 aa23.95■■□□□ 1.43
WDTC1-201ENST00000319394 ZNF644Q9H582 1327 aaPredicted RBP23.95■■□□□ 1.42
WDTC1-201ENST00000319394 EFCAB5A4FU69 1503 aa23.93■■□□□ 1.42
WDTC1-201ENST00000319394 U2SURPO15042 1029 aaKnown RBP23.93■■□□□ 1.42
WDTC1-201ENST00000319394 PLPPR3Q6T4P5 718 aa23.92■■□□□ 1.42
WDTC1-201ENST00000319394 JPH4Q96JJ6 628 aa23.92■■□□□ 1.42
WDTC1-201ENST00000319394 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.92■■□□□ 1.421e-10■■□□□ 12.6
WDTC1-201ENST00000319394 PANK3Q9H999 370 aa23.91■■□□□ 1.42
WDTC1-201ENST00000319394 ARID4BQ4LE39 1312 aaPredicted RBP23.91■■□□□ 1.42
WDTC1-201ENST00000319394 HMGXB3Q12766 1538 aa23.9■■□□□ 1.42
WDTC1-201ENST00000319394 CCDC144AA2RUR9 1427 aa23.89■■□□□ 1.42
WDTC1-201ENST00000319394 PLIN1O60240 522 aa23.89■■□□□ 1.41
WDTC1-201ENST00000319394 EFCAB2Q5VUJ9 269 aa23.87■■□□□ 1.41
WDTC1-201ENST00000319394 USP35Q9P2H5 1018 aa23.86■■□□□ 1.41
WDTC1-201ENST00000319394 CCDC146Q8IYE0 955 aa23.84■■□□□ 1.41
WDTC1-201ENST00000319394 POGKQ9P215 609 aa23.84■■□□□ 1.41
WDTC1-201ENST00000319394 CRBNQ96SW2 442 aa23.83■■□□□ 1.41
WDTC1-201ENST00000319394 CHMP4BQ9H444 224 aaKnown RBP23.82■■□□□ 1.4
WDTC1-201ENST00000319394 NBPF8Q3BBV2 869 aa23.82■■□□□ 1.4
WDTC1-201ENST00000319394 MAP3K1Q13233 1512 aa23.82■■□□□ 1.4
WDTC1-201ENST00000319394 BICRAQ9NZM4 1560 aa23.82■■□□□ 1.4
WDTC1-201ENST00000319394 EIF3AQ14152 1382 aaKnown RBP23.81■■□□□ 1.4
WDTC1-201ENST00000319394 L1TD1Q5T7N2 865 aaKnown RBP23.81■■□□□ 1.4
WDTC1-201ENST00000319394 CENPQQ7L2Z9 268 aaPredicted RBP23.81■■□□□ 1.4
WDTC1-201ENST00000319394 NCLP19338 710 aaKnown RBP23.81■■□□□ 1.4
WDTC1-201ENST00000319394 HSCBQ8IWL3 235 aa23.81■■□□□ 1.4
WDTC1-201ENST00000319394 HSP90AB1P08238 724 aaKnown RBP23.8■■□□□ 1.4
WDTC1-201ENST00000319394 CCDC184Q52MB2 194 aa23.8■■□□□ 1.4
WDTC1-201ENST00000319394 SLKQ9H2G2 1235 aaPredicted RBP23.79■■□□□ 1.4
WDTC1-201ENST00000319394 PNNQ9H307 717 aaKnown RBP23.79■■□□□ 1.4
WDTC1-201ENST00000319394 RWDD1Q9H446 243 aaPredicted RBP23.79■■□□□ 1.4
WDTC1-201ENST00000319394 PEG3Q9GZU2 1588 aa23.79■■□□□ 1.4
WDTC1-201ENST00000319394 NAIPQ13075 1403 aa23.79■■□□□ 1.4
WDTC1-201ENST00000319394 EHBP1L1Q8N3D4 1523 aa23.78■■□□□ 1.4
WDTC1-201ENST00000319394 SPRYD3Q8NCJ5 442 aa23.78■■□□□ 1.4
WDTC1-201ENST00000319394 CASC1Q6TDU7 716 aa23.76■■□□□ 1.39
WDTC1-201ENST00000319394 PMFBP1Q8TBY8 1022 aa23.76■■□□□ 1.39
WDTC1-201ENST00000319394 CENPJQ9HC77 1338 aaPredicted RBP23.76■■□□□ 1.39
WDTC1-201ENST00000319394 U2AF1L5P0DN76 240 aaPredicted RBP23.76■■□□□ 1.39
WDTC1-201ENST00000319394 U2AF1Q01081 240 aaKnown RBP eCLIP23.76■■□□□ 1.39
WDTC1-201ENST00000319394 FAM161AQ3B820 660 aa23.75■■□□□ 1.39
WDTC1-201ENST00000319394 NAP1L5Q96NT1 182 aaPredicted RBP23.75■■□□□ 1.39
WDTC1-201ENST00000319394 BRD4O60885 1362 aaPredicted RBP23.75■■□□□ 1.39
WDTC1-201ENST00000319394 SRPK2P78362 688 aaKnown RBP23.74■■□□□ 1.39
WDTC1-201ENST00000319394 ANKRD50Q9ULJ7 1429 aa23.74■■□□□ 1.39
WDTC1-201ENST00000319394 MIA2Q96PC5 1412 aa23.74■■□□□ 1.39
WDTC1-201ENST00000319394 PCF11O94913 1555 aaKnown RBP23.73■■□□□ 1.39
WDTC1-201ENST00000319394 POLA1P09884 1462 aaPredicted RBP23.72■■□□□ 1.39
WDTC1-201ENST00000319394 SAFB2Q14151 953 aaKnown RBP eCLIP23.72■■□□□ 1.39
WDTC1-201ENST00000319394 SLC4A3P48751 1232 aa23.71■■□□□ 1.39
WDTC1-201ENST00000319394 TOPBP1Q92547 1522 aa23.7■■□□□ 1.39
WDTC1-201ENST00000319394 KIF3BO15066 747 aa23.7■■□□□ 1.38
WDTC1-201ENST00000319394 SPAG9O60271 1321 aaKnown RBP23.7■■□□□ 1.38
WDTC1-201ENST00000319394 AQRO60306 1485 aaKnown RBP eCLIP23.7■■□□□ 1.384e-9■■■■■ 36.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms