RNA–Protein interactions for RNA: ENST00000316084.9

RPS4X-201, Transcript of ribosomal protein S4 X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS4X, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4X-201ENST00000316084 ABCA9Q8IUA7 1624 aa13.9□□□□□ -0.18
RPS4X-201ENST00000316084 ZFYVE16Q7Z3T8 1539 aa13.9□□□□□ -0.18
RPS4X-201ENST00000316084 PTPRKQ15262 1439 aa13.88□□□□□ -0.19
RPS4X-201ENST00000316084 EFCAB5A4FU69 1503 aa13.88□□□□□ -0.19
RPS4X-201ENST00000316084 BIVM-ERCC5R4GMW8 1640 aa13.87□□□□□ -0.19
RPS4X-201ENST00000316084 C3P01024 1663 aa13.87□□□□□ -0.19
RPS4X-201ENST00000316084 DENND4BO75064 1496 aaPredicted RBP13.86□□□□□ -0.19
RPS4X-201ENST00000316084 IQGAP2Q13576 1575 aa13.86□□□□□ -0.19
RPS4X-201ENST00000316084 ZMYM4Q5VZL5 1548 aa13.85□□□□□ -0.19
RPS4X-201ENST00000316084 FHOD3Q2V2M9 1422 aa13.85□□□□□ -0.19
RPS4X-201ENST00000316084 CPS1P31327 1500 aa13.85□□□□□ -0.19
RPS4X-201ENST00000316084 HRCP23327 699 aa13.82□□□□□ -0.2
RPS4X-201ENST00000316084 RBM33Q96EV2 1170 aaKnown RBP13.82□□□□□ -0.2
RPS4X-201ENST00000316084 TRAPPC8Q9Y2L5 1435 aa13.82□□□□□ -0.2
RPS4X-201ENST00000316084 SETBP1Q9Y6X0 1596 aa13.81□□□□□ -0.2
RPS4X-201ENST00000316084 PPP6R1Q9UPN7 881 aa13.8□□□□□ -0.2
RPS4X-201ENST00000316084 PKD2Q13563 968 aa13.79□□□□□ -0.2
RPS4X-201ENST00000316084 MAGI2Q86UL8 1455 aa13.78□□□□□ -0.2
RPS4X-201ENST00000316084 TRIM52Q96A61 297 aa13.78□□□□□ -0.2
RPS4X-201ENST00000316084 TCOF1Q13428 1488 aaKnown RBP13.76□□□□□ -0.21
RPS4X-201ENST00000316084 PLA2R1Q13018 1463 aa13.75□□□□□ -0.21
RPS4X-201ENST00000316084 ABCA8O94911 1581 aa13.75□□□□□ -0.21
RPS4X-201ENST00000316084 HECW1Q76N89 1606 aa13.75□□□□□ -0.21
RPS4X-201ENST00000316084 SHANK2Q9UPX8 1470 aa13.75□□□□□ -0.21
RPS4X-201ENST00000316084 ATP10AO60312 1499 aa13.73□□□□□ -0.21
RPS4X-201ENST00000316084 SUPT6HQ7KZ85 1726 aaKnown RBP13.73□□□□□ -0.21
RPS4X-201ENST00000316084 ZRANB1Q9UGI0 708 aa13.73□□□□□ -0.21
RPS4X-201ENST00000316084 C9orf84Q5VXU9 1444 aa13.73□□□□□ -0.21
RPS4X-201ENST00000316084 RAPGEF2Q9Y4G8 1499 aa13.72□□□□□ -0.21
RPS4X-201ENST00000316084 UGGT2Q9NYU1 1516 aa13.71□□□□□ -0.21
RPS4X-201ENST00000316084 IGF1RP08069 1367 aa13.71□□□□□ -0.21
RPS4X-201ENST00000316084 LRRC7Q96NW7 1537 aa13.71□□□□□ -0.22
RPS4X-201ENST00000316084 RNF17Q9BXT8 1623 aaKnown RBP13.66□□□□□ -0.22
RPS4X-201ENST00000316084 ZNF142P52746 1687 aaPredicted RBP13.66□□□□□ -0.22
RPS4X-201ENST00000316084 CFAP74Q9C0B2 1584 aa13.64□□□□□ -0.23
RPS4X-201ENST00000316084 ARID3CA6NKF2 412 aa13.64□□□□□ -0.23
RPS4X-201ENST00000316084 FOXD1Q16676 465 aa13.64□□□□□ -0.23
RPS4X-201ENST00000316084 VWDEQ8N2E2 1590 aa13.63□□□□□ -0.23
RPS4X-201ENST00000316084 ATP10BO94823 1461 aa13.62□□□□□ -0.23
RPS4X-201ENST00000316084 NPATQ14207 1427 aa13.61□□□□□ -0.23
RPS4X-201ENST00000316084 MYO3AQ8NEV4 1616 aa13.61□□□□□ -0.23
RPS4X-201ENST00000316084 CEP170BQ9Y4F5 1589 aaPredicted RBP13.6□□□□□ -0.23
RPS4X-201ENST00000316084 ESF1Q9H501 851 aaKnown RBP13.59□□□□□ -0.23
RPS4X-201ENST00000316084 LRP5O75197 1615 aa13.59□□□□□ -0.23
RPS4X-201ENST00000316084 CDK12Q9NYV4 1490 aaPredicted RBP13.59□□□□□ -0.23
RPS4X-201ENST00000316084 YY1P25490 414 aa13.59□□□□□ -0.23
RPS4X-201ENST00000316084 POLR1AO95602 1720 aaPredicted RBP13.58□□□□□ -0.24
RPS4X-201ENST00000316084 CARMIL1Q5VZK9 1371 aa13.58□□□□□ -0.24
RPS4X-201ENST00000316084 NEURL4Q96JN8 1562 aa13.58□□□□□ -0.24
RPS4X-201ENST00000316084 RAPGEF6Q8TEU7 1601 aa13.57□□□□□ -0.24
RPS4X-201ENST00000316084 RXRBP28702 533 aa13.57□□□□□ -0.24
RPS4X-201ENST00000316084 ZNF772Q68DY9 489 aaPredicted RBP13.57□□□□□ -0.24
RPS4X-201ENST00000316084 SENP3-EIF4A1A0A087X0R7 540 aa13.55□□□□□ -0.24
RPS4X-201ENST00000316084 STRCP1A6NGW2 1772 aa13.55□□□□□ -0.24
RPS4X-201ENST00000316084 PCGF6Q9BYE7 350 aa13.54□□□□□ -0.24
RPS4X-201ENST00000316084 AGLP35573 1532 aa13.53□□□□□ -0.24
RPS4X-201ENST00000316084 CNTLNQ9NXG0 1405 aa13.52□□□□□ -0.24
RPS4X-201ENST00000316084 MROH2AA6NES4 1674 aa13.51□□□□□ -0.25
RPS4X-201ENST00000316084 FAM135BQ49AJ0 1406 aa13.51□□□□□ -0.25
RPS4X-201ENST00000316084 SCAPERQ9BY12 1400 aa13.51□□□□□ -0.25
RPS4X-201ENST00000316084 SYNMO15061 1565 aa13.51□□□□□ -0.25
RPS4X-201ENST00000316084 KIF27Q86VH2 1401 aa13.5□□□□□ -0.25
RPS4X-201ENST00000316084 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.49□□□□□ -0.25
RPS4X-201ENST00000316084 REREQ9P2R6 1566 aa13.49□□□□□ -0.25
RPS4X-201ENST00000316084 DIP2CQ9Y2E4 1556 aa13.47□□□□□ -0.25
RPS4X-201ENST00000316084 LRP6O75581 1613 aa13.47□□□□□ -0.25
RPS4X-201ENST00000316084 DNMT1P26358 1616 aaKnown RBP13.46□□□□□ -0.25
RPS4X-201ENST00000316084 ZMYM3Q14202 1370 aa13.46□□□□□ -0.25
RPS4X-201ENST00000316084 RGS12O14924 1447 aa13.46□□□□□ -0.26
RPS4X-201ENST00000316084 NUTM2BA6NNL0 878 aaPredicted RBP13.45□□□□□ -0.26
RPS4X-201ENST00000316084 NUTM2EB1AL46 878 aaPredicted RBP13.45□□□□□ -0.26
RPS4X-201ENST00000316084 NUTM2DQ5VT03 806 aaPredicted RBP13.45□□□□□ -0.26
RPS4X-201ENST00000316084 NUTM2AQ8IVF1 878 aaPredicted RBP13.45□□□□□ -0.26
RPS4X-201ENST00000316084 CDK13Q14004 1512 aaKnown RBP13.45□□□□□ -0.26
RPS4X-201ENST00000316084 ROBO1Q9Y6N7 1651 aa13.45□□□□□ -0.26
RPS4X-201ENST00000316084 TRIM26Q12899 539 aaPredicted RBP13.44□□□□□ -0.26
RPS4X-201ENST00000316084 JCADQ9P266 1359 aa13.44□□□□□ -0.26
RPS4X-201ENST00000316084 GOLGA3Q08378 1498 aa13.43□□□□□ -0.26
RPS4X-201ENST00000316084 MEX3CQ5U5Q3 659 aaKnown RBP13.43□□□□□ -0.26
RPS4X-201ENST00000316084 XIRP1Q702N8 1843 aaKnown RBP13.42□□□□□ -0.26
RPS4X-201ENST00000316084 A2ML1A8K2U0 1454 aa13.41□□□□□ -0.26
RPS4X-201ENST00000316084 ATAD2Q6PL18 1390 aa13.4□□□□□ -0.26
RPS4X-201ENST00000316084 ABCA6Q8N139 1617 aa13.4□□□□□ -0.26
RPS4X-201ENST00000316084 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.39□□□□□ -0.27
RPS4X-201ENST00000316084 SLC34A2O95436 690 aa13.39□□□□□ -0.27
RPS4X-201ENST00000316084 HNRNPUL2Q1KMD3 747 aaKnown RBP13.39□□□□□ -0.27
RPS4X-201ENST00000316084 PHLPP1O60346 1717 aa13.39□□□□□ -0.27
RPS4X-201ENST00000316084 NPHP4O75161 1426 aaPredicted RBP13.38□□□□□ -0.27
RPS4X-201ENST00000316084 LOC105371045A0A1W2PR82 267 aa13.37□□□□□ -0.27
RPS4X-201ENST00000316084 KDM5CP41229 1560 aa13.36□□□□□ -0.27
RPS4X-201ENST00000316084 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.36□□□□□ -0.27
RPS4X-201ENST00000316084 NHSL1Q5SYE7 1610 aa13.36□□□□□ -0.27
RPS4X-201ENST00000316084 MED14O60244 1454 aa13.36□□□□□ -0.27
RPS4X-201ENST00000316084 MYT1LQ9UL68 1186 aa13.35□□□□□ -0.27
RPS4X-201ENST00000316084 CLTCQ00610 1675 aaKnown RBP13.35□□□□□ -0.27
RPS4X-201ENST00000316084 IQGAP1P46940 1657 aa13.35□□□□□ -0.27
RPS4X-201ENST00000316084 ANKLE2Q86XL3 938 aa13.34□□□□□ -0.27
RPS4X-201ENST00000316084 ZNF518AQ6AHZ1 1483 aa13.34□□□□□ -0.27
RPS4X-201ENST00000316084 SPATA31A6Q5VVP1 1343 aa13.34□□□□□ -0.27
RPS4X-201ENST00000316084 ZEB1P37275 1124 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms