RNA–Protein interactions for RNA: ENST00000313401.3

CDK5R1-201, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5R1, Length 4,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-201ENST00000313401 KIF7Q2M1P5 1343 aa24.46■■□□□ 1.51
CDK5R1-201ENST00000313401 MAPKBP1O60336 1514 aa24.45■■□□□ 1.51
CDK5R1-201ENST00000313401 CC2D2AQ9P2K1 1620 aa24.45■■□□□ 1.5
CDK5R1-201ENST00000313401 JPH4Q96JJ6 628 aa24.44■■□□□ 1.5
CDK5R1-201ENST00000313401 C11orf95C9JLR9 678 aaPredicted RBP24.43■■□□□ 1.5
CDK5R1-201ENST00000313401 NAIPQ13075 1403 aa24.41■■□□□ 1.5
CDK5R1-201ENST00000313401 HFM1A2PYH4 1435 aa24.41■■□□□ 1.5
CDK5R1-201ENST00000313401 CCDC7Q96M83 1385 aa24.41■■□□□ 1.5
CDK5R1-201ENST00000313401 ANKRD30AQ9BXX3 1397 aa24.38■■□□□ 1.49
CDK5R1-201ENST00000313401 LAS1LQ9Y4W2 734 aaKnown RBP24.37■■□□□ 1.49
CDK5R1-201ENST00000313401 KNSTRNQ9Y448 316 aa24.37■■□□□ 1.49
CDK5R1-201ENST00000313401 NOP58Q9Y2X3 529 aaKnown RBP24.37■■□□□ 1.49
CDK5R1-201ENST00000313401 NUDCQ9Y266 331 aa24.36■■□□□ 1.49
CDK5R1-201ENST00000313401 PTPRKQ15262 1439 aa24.35■■□□□ 1.49
CDK5R1-201ENST00000313401 USP47Q96K76 1375 aa24.35■■□□□ 1.49
CDK5R1-201ENST00000313401 ROCK2O75116 1388 aaKnown RBP24.35■■□□□ 1.49
CDK5R1-201ENST00000313401 NEUROD2Q15784 382 aa24.35■■□□□ 1.49
CDK5R1-201ENST00000313401 TNNT2P45379 298 aaPredicted RBP24.34■■□□□ 1.49
CDK5R1-201ENST00000313401 ZBED9Q6R2W3 1325 aa24.32■■□□□ 1.48
CDK5R1-201ENST00000313401 ABCA10Q8WWZ4 1543 aa24.29■■□□□ 1.48
CDK5R1-201ENST00000313401 CNTLNQ9NXG0 1405 aa24.29■■□□□ 1.48
CDK5R1-201ENST00000313401 EFCAB5A4FU69 1503 aa24.29■■□□□ 1.48
CDK5R1-201ENST00000313401 RCAN3Q9UKA8 241 aa24.28■■□□□ 1.48
CDK5R1-201ENST00000313401 CDK13Q14004 1512 aaKnown RBP24.27■■□□□ 1.48
CDK5R1-201ENST00000313401 RGS3P49796 1198 aa24.27■■□□□ 1.48
CDK5R1-201ENST00000313401 CARMIL2Q6F5E8 1435 aa24.27■■□□□ 1.48
CDK5R1-201ENST00000313401 DNMBPQ6XZF7 1577 aa24.26■■□□□ 1.47
CDK5R1-201ENST00000313401 ERICH6BQ5W0A0 696 aa24.25■■□□□ 1.47
CDK5R1-201ENST00000313401 PLIN1O60240 522 aa24.25■■□□□ 1.47
CDK5R1-201ENST00000313401 TMF1P82094 1093 aa24.24■■□□□ 1.47
CDK5R1-201ENST00000313401 MAP3K1Q13233 1512 aa24.23■■□□□ 1.47
CDK5R1-201ENST00000313401 PRDM2Q13029 1718 aa24.21■■□□□ 1.47
CDK5R1-201ENST00000313401 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.21■■□□□ 1.47
CDK5R1-201ENST00000313401 KTN1Q86UP2 1357 aaKnown RBP24.21■■□□□ 1.47
CDK5R1-201ENST00000313401 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.2■■□□□ 1.46
CDK5R1-201ENST00000313401 PRG4Q92954 1404 aaPredicted RBP24.2■■□□□ 1.46
CDK5R1-201ENST00000313401 EXOC6Q8TAG9 804 aa24.19■■□□□ 1.46
CDK5R1-201ENST00000313401 DEKP35659 375 aaKnown RBP24.19■■□□□ 1.46
CDK5R1-201ENST00000313401 RALBP1Q15311 655 aa24.17■■□□□ 1.46
CDK5R1-201ENST00000313401 ARXQ96QS3 562 aa24.16■■□□□ 1.46
CDK5R1-201ENST00000313401 NLRP13Q86W25 1043 aa24.16■■□□□ 1.46
CDK5R1-201ENST00000313401 PANK3Q9H999 370 aa24.16■■□□□ 1.46
CDK5R1-201ENST00000313401 URB2Q14146 1524 aaKnown RBP24.14■■□□□ 1.46
CDK5R1-201ENST00000313401 EHBP1L1Q8N3D4 1523 aa24.14■■□□□ 1.45
CDK5R1-201ENST00000313401 AKNAQ7Z591 1439 aa24.13■■□□□ 1.45
CDK5R1-201ENST00000313401 FRAT1Q92837 279 aaPredicted RBP24.13■■□□□ 1.45
CDK5R1-201ENST00000313401 EPRSP07814 1512 aaKnown RBP24.12■■□□□ 1.45
CDK5R1-201ENST00000313401 NEFMP07197 916 aa24.12■■□□□ 1.45
CDK5R1-201ENST00000313401 CCDC146Q8IYE0 955 aa24.11■■□□□ 1.45
CDK5R1-201ENST00000313401 MYBBP1AQ9BQG0 1328 aaKnown RBP24.11■■□□□ 1.45
CDK5R1-201ENST00000313401 RTN4Q9NQC3 1192 aaKnown RBP24.11■■□□□ 1.45
CDK5R1-201ENST00000313401 ANKRD50Q9ULJ7 1429 aa24.11■■□□□ 1.45
CDK5R1-201ENST00000313401 NPM1P06748 294 aaKnown RBP eCLIP24.11■■□□□ 1.45
CDK5R1-201ENST00000313401 NBPF1Q3BBV0 1214 aa24.1■■□□□ 1.45
CDK5R1-201ENST00000313401 KIF15Q9NS87 1388 aa24.09■■□□□ 1.45
CDK5R1-201ENST00000313401 SUPT6HQ7KZ85 1726 aaKnown RBP24.08■■□□□ 1.44
CDK5R1-201ENST00000313401 MSH5O43196 834 aa24.08■■□□□ 1.44
CDK5R1-201ENST00000313401 SAFB2Q14151 953 aaKnown RBP eCLIP24.07■■□□□ 1.44
CDK5R1-201ENST00000313401 CDCA7LQ96GN5 454 aa24.07■■□□□ 1.44
CDK5R1-201ENST00000313401 PTPN23Q9H3S7 1636 aa24.06■■□□□ 1.44
CDK5R1-201ENST00000313401 GRIN2BQ13224 1484 aa24.06■■□□□ 1.44
CDK5R1-201ENST00000313401 DAPK1P53355 1430 aa24.06■■□□□ 1.44
CDK5R1-201ENST00000313401 CDCA8Q53HL2 280 aa24.06■■□□□ 1.44
CDK5R1-201ENST00000313401 FANCIQ9NVI1 1328 aa24.05■■□□□ 1.44
CDK5R1-201ENST00000313401 STAG3Q9UJ98 1225 aa24.05■■□□□ 1.44
CDK5R1-201ENST00000313401 CCDC144AA2RUR9 1427 aa24.04■■□□□ 1.44
CDK5R1-201ENST00000313401 ANKRD30BQ9BXX2 1392 aa24.04■■□□□ 1.44
CDK5R1-201ENST00000313401 RRP1P56182 461 aaKnown RBP24.03■■□□□ 1.44
CDK5R1-201ENST00000313401 MIA2Q96PC5 1412 aa24.03■■□□□ 1.44
CDK5R1-201ENST00000313401 IPO9Q96P70 1041 aaKnown RBP24.01■■□□□ 1.43
CDK5R1-201ENST00000313401 PTPRGP23470 1445 aa24.01■■□□□ 1.43
CDK5R1-201ENST00000313401 KIF3BO15066 747 aa24■■□□□ 1.43
CDK5R1-201ENST00000313401 PNISRQ8TF01 805 aaKnown RBP24■■□□□ 1.43
CDK5R1-201ENST00000313401 EFCAB2Q5VUJ9 269 aa23.99■■□□□ 1.43
CDK5R1-201ENST00000313401 ABCC5O15440 1437 aa23.98■■□□□ 1.43
CDK5R1-201ENST00000313401 GGT6Q6P531 493 aa23.98■■□□□ 1.43
CDK5R1-201ENST00000313401 NUTM2DQ5VT03 806 aaPredicted RBP23.97■■□□□ 1.43
CDK5R1-201ENST00000313401 PPM1GO15355 546 aaPredicted RBP23.97■■□□□ 1.43
CDK5R1-201ENST00000313401 PLPPR3Q6T4P5 718 aa23.97■■□□□ 1.43
CDK5R1-201ENST00000313401 CRBNQ96SW2 442 aa23.96■■□□□ 1.43
CDK5R1-201ENST00000313401 PAK3O75914 559 aaPredicted RBP23.96■■□□□ 1.43
CDK5R1-201ENST00000313401 SLC4A3P48751 1232 aa23.96■■□□□ 1.43
CDK5R1-201ENST00000313401 CUL7Q14999 1698 aa23.95■■□□□ 1.43
CDK5R1-201ENST00000313401 UPF2Q9HAU5 1272 aaKnown RBP23.95■■□□□ 1.42
CDK5R1-201ENST00000313401 SLC24A1O60721 1099 aa23.95■■□□□ 1.42
CDK5R1-201ENST00000313401 KIAA1107Q9UPP5 1409 aa23.94■■□□□ 1.42
CDK5R1-201ENST00000313401 HECW1Q76N89 1606 aa23.93■■□□□ 1.42
CDK5R1-201ENST00000313401 TCERG1O14776 1098 aaKnown RBP23.93■■□□□ 1.42
CDK5R1-201ENST00000313401 SNAPC4Q5SXM2 1469 aa23.93■■□□□ 1.42
CDK5R1-201ENST00000313401 PLB1Q6P1J6 1458 aa23.93■■□□□ 1.42
CDK5R1-201ENST00000313401 PDE4AP27815 886 aa23.92■■□□□ 1.42
CDK5R1-201ENST00000313401 ZNF608Q9ULD9 1512 aaPredicted RBP23.92■■□□□ 1.42
CDK5R1-201ENST00000313401 DDRGK1Q96HY6 314 aa23.92■■□□□ 1.42
CDK5R1-201ENST00000313401 TROQ12816 1431 aaPredicted RBP23.91■■□□□ 1.42
CDK5R1-201ENST00000313401 IQGAP2Q13576 1575 aa23.9■■□□□ 1.42
CDK5R1-201ENST00000313401 THOC2Q8NI27 1593 aaKnown RBP23.9■■□□□ 1.42
CDK5R1-201ENST00000313401 SPAG9O60271 1321 aaKnown RBP23.9■■□□□ 1.42
CDK5R1-201ENST00000313401 EIF5BO60841 1220 aaKnown RBP23.9■■□□□ 1.42
CDK5R1-201ENST00000313401 U2SURPO15042 1029 aaKnown RBP23.89■■□□□ 1.42
CDK5R1-201ENST00000313401 SKAP1Q86WV1 359 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms