RNA–Protein interactions for RNA: ENST00000310931.8

HDLBP-201, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDLBP, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-201ENST00000310931 RSPH4AQ5TD94 716 aa13.19□□□□□ -0.3
HDLBP-201ENST00000310931 PHLDB1Q86UU1 1377 aa13.18□□□□□ -0.3
HDLBP-201ENST00000310931 TCOF1Q13428 1488 aaKnown RBP13.18□□□□□ -0.3
HDLBP-201ENST00000310931 LRRIQ1Q96JM4 1722 aa13.17□□□□□ -0.3
HDLBP-201ENST00000310931 CNGB1Q14028 1251 aaPredicted RBP13.17□□□□□ -0.3
HDLBP-201ENST00000310931 CFDP1Q9UEE9 299 aaPredicted RBP13.17□□□□□ -0.3
HDLBP-201ENST00000310931 ERCC6L2Q5T890 1561 aa13.16□□□□□ -0.3
HDLBP-201ENST00000310931 ARID3CA6NKF2 412 aa13.15□□□□□ -0.3
HDLBP-201ENST00000310931 ZCCHC11Q5TAX3 1644 aaKnown RBP13.15□□□□□ -0.3
HDLBP-201ENST00000310931 PTPN23Q9H3S7 1636 aa13.15□□□□□ -0.3
HDLBP-201ENST00000310931 WDR7Q9Y4E6 1490 aa13.14□□□□□ -0.31
HDLBP-201ENST00000310931 MAGI3Q5TCQ9 1506 aa13.13□□□□□ -0.31
HDLBP-201ENST00000310931 ARAP3Q8WWN8 1544 aa13.13□□□□□ -0.31
HDLBP-201ENST00000310931 FKBP8Q14318 412 aa13.12□□□□□ -0.31
HDLBP-201ENST00000310931 POLR3GLQ9BT43 218 aa13.12□□□□□ -0.31
HDLBP-201ENST00000310931 AKNAQ7Z591 1439 aa13.11□□□□□ -0.31
HDLBP-201ENST00000310931 EFCAB2Q5VUJ9 269 aa13.11□□□□□ -0.31
HDLBP-201ENST00000310931 NPM2Q86SE8 214 aaKnown RBP13.1□□□□□ -0.31
HDLBP-201ENST00000310931 ABCC10Q5T3U5 1492 aa13.1□□□□□ -0.31
HDLBP-201ENST00000310931 GPATCH8Q9UKJ3 1502 aaKnown RBP13.09□□□□□ -0.31
HDLBP-201ENST00000310931 RTN4Q9NQC3 1192 aaKnown RBP13.08□□□□□ -0.32
HDLBP-201ENST00000310931 CFAP74Q9C0B2 1584 aa13.08□□□□□ -0.32
HDLBP-201ENST00000310931 ROCK1Q13464 1354 aa13.08□□□□□ -0.32
HDLBP-201ENST00000310931 SETD5Q9C0A6 1442 aa13.08□□□□□ -0.32
HDLBP-201ENST00000310931 TSPY4P0CV99 314 aa13.07□□□□□ -0.32
HDLBP-201ENST00000310931 TSPY10P0CW01 314 aa13.07□□□□□ -0.32
HDLBP-201ENST00000310931 RIMBP3CA6NJZ7 1639 aa13.07□□□□□ -0.32
HDLBP-201ENST00000310931 RIMBP3BA6NNM3 1639 aa13.07□□□□□ -0.32
HDLBP-201ENST00000310931 RIMBP3Q9UFD9 1639 aa13.07□□□□□ -0.32
HDLBP-201ENST00000310931 MYO5CQ9NQX4 1742 aa13.06□□□□□ -0.32
HDLBP-201ENST00000310931 ASXL2Q76L83 1435 aa13.06□□□□□ -0.32
HDLBP-201ENST00000310931 PREX2Q70Z35 1606 aa13.06□□□□□ -0.32
HDLBP-201ENST00000310931 ARHGAP5Q13017 1502 aa13.06□□□□□ -0.32
HDLBP-201ENST00000310931 KIAA1107Q9UPP5 1409 aa13.06□□□□□ -0.32
HDLBP-201ENST00000310931 CAMSAP2Q08AD1 1489 aa13.06□□□□□ -0.32
HDLBP-201ENST00000310931 SHANK2Q9UPX8 1470 aa13.06□□□□□ -0.32
HDLBP-201ENST00000310931 PLCH2O75038 1416 aa13.06□□□□□ -0.32
HDLBP-201ENST00000310931 MAPKBP1O60336 1514 aa13.06□□□□□ -0.32
HDLBP-201ENST00000310931 PRKCSHP14314 528 aaPredicted RBP13.05□□□□□ -0.32
HDLBP-201ENST00000310931 ITGAEP38570 1179 aa13.05□□□□□ -0.32
HDLBP-201ENST00000310931 KCNH8Q96L42 1107 aa13.05□□□□□ -0.32
HDLBP-201ENST00000310931 ANKRD30AQ9BXX3 1397 aa13.04□□□□□ -0.32
HDLBP-201ENST00000310931 ARHGEF5Q12774 1597 aa13.04□□□□□ -0.32
HDLBP-201ENST00000310931 DNMT1P26358 1616 aaKnown RBP13.04□□□□□ -0.32
HDLBP-201ENST00000310931 ZNF777Q9ULD5 760 aaPredicted RBP13.03□□□□□ -0.32
HDLBP-201ENST00000310931 DAPK1P53355 1430 aa13.03□□□□□ -0.32
HDLBP-201ENST00000310931 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.02□□□□□ -0.322e-6■■■■□ 21.9
HDLBP-201ENST00000310931 ZBTB47Q9UFB7 747 aaPredicted RBP13.02□□□□□ -0.33
HDLBP-201ENST00000310931 ABCA9Q8IUA7 1624 aa13.02□□□□□ -0.33
HDLBP-201ENST00000310931 HFM1A2PYH4 1435 aa13.02□□□□□ -0.33
HDLBP-201ENST00000310931 CYB5RLQ6IPT4 315 aa13.01□□□□□ -0.33
HDLBP-201ENST00000310931 CCDC141Q6ZP82 1450 aa13.01□□□□□ -0.33
HDLBP-201ENST00000310931 CDC42BPAQ5VT25 1732 aa13.01□□□□□ -0.33
HDLBP-201ENST00000310931 GLI2P10070 1586 aa12.99□□□□□ -0.33
HDLBP-201ENST00000310931 ADGBQ8N7X0 1667 aa12.98□□□□□ -0.33
HDLBP-201ENST00000310931 ADGRL2O95490 1459 aa12.98□□□□□ -0.33
HDLBP-201ENST00000310931 TTC37Q6PGP7 1564 aa12.97□□□□□ -0.33
HDLBP-201ENST00000310931 ABCC5O15440 1437 aa12.97□□□□□ -0.33
HDLBP-201ENST00000310931 TEX14Q8IWB6 1497 aa12.97□□□□□ -0.33
HDLBP-201ENST00000310931 ANP32CO43423 234 aa12.96□□□□□ -0.33
HDLBP-201ENST00000310931 ANP32BQ92688 251 aaKnown RBP12.96□□□□□ -0.33
HDLBP-201ENST00000310931 NEO1Q92859 1461 aa12.96□□□□□ -0.33
HDLBP-201ENST00000310931 CD109Q6YHK3 1445 aa12.96□□□□□ -0.33
HDLBP-201ENST00000310931 MAST1Q9Y2H9 1570 aa12.95□□□□□ -0.34
HDLBP-201ENST00000310931 GCC2Q8IWJ2 1684 aa12.95□□□□□ -0.34
HDLBP-201ENST00000310931 RAB3GAP2Q9H2M9 1393 aa12.95□□□□□ -0.34
HDLBP-201ENST00000310931 C9orf84Q5VXU9 1444 aa12.95□□□□□ -0.34
HDLBP-201ENST00000310931 FANCAO15360 1455 aa12.94□□□□□ -0.34
HDLBP-201ENST00000310931 RTEL1-TNFRSF6BF6WH68 1400 aa12.94□□□□□ -0.34
HDLBP-201ENST00000310931 CROCC2H7BZ55 1655 aa12.94□□□□□ -0.34
HDLBP-201ENST00000310931 ARXQ96QS3 562 aa12.93□□□□□ -0.34
HDLBP-201ENST00000310931 CDC42BPBQ9Y5S2 1711 aa12.93□□□□□ -0.34
HDLBP-201ENST00000310931 SAMD9LQ8IVG5 1584 aa12.92□□□□□ -0.34
HDLBP-201ENST00000310931 ABCC1P33527 1531 aa12.92□□□□□ -0.34
HDLBP-201ENST00000310931 MIER1Q8N108 512 aa12.91□□□□□ -0.34
HDLBP-201ENST00000310931 NAIPQ13075 1403 aa12.91□□□□□ -0.34
HDLBP-201ENST00000310931 TNNT2P45379 298 aaPredicted RBP12.91□□□□□ -0.34
HDLBP-201ENST00000310931 ADGRL1O94910 1474 aa12.91□□□□□ -0.34
HDLBP-201ENST00000310931 TIMELESSQ9UNS1 1208 aa12.9□□□□□ -0.34
HDLBP-201ENST00000310931 SPAG9O60271 1321 aaKnown RBP12.9□□□□□ -0.34
HDLBP-201ENST00000310931 SYCP2Q9BX26 1530 aa12.89□□□□□ -0.35
HDLBP-201ENST00000310931 CHIC2Q9UKJ5 165 aa12.89□□□□□ -0.35
HDLBP-201ENST00000310931 NCOA1Q15788 1441 aa12.89□□□□□ -0.35
HDLBP-201ENST00000310931 ERICH6BQ5W0A0 696 aa12.89□□□□□ -0.35
HDLBP-201ENST00000310931 TRIM52Q96A61 297 aa12.89□□□□□ -0.35
HDLBP-201ENST00000310931 ZNF518AQ6AHZ1 1483 aa12.89□□□□□ -0.35
HDLBP-201ENST00000310931 MBD5Q9P267 1494 aa12.89□□□□□ -0.35
HDLBP-201ENST00000310931 PLXNC1O60486 1568 aa12.88□□□□□ -0.35
HDLBP-201ENST00000310931 HNRNPMP52272 730 aaKnown RBP eCLIP12.88□□□□□ -0.353e-7■■■■■ 30.7
HDLBP-201ENST00000310931 RRP7BPQ9NSQ0 103 aa12.88□□□□□ -0.35
HDLBP-201ENST00000310931 DUOX2Q9NRD8 1548 aa12.88□□□□□ -0.35
HDLBP-201ENST00000310931 ZNF644Q9H582 1327 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-201ENST00000310931 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.87□□□□□ -0.35
HDLBP-201ENST00000310931 KIF15Q9NS87 1388 aa12.87□□□□□ -0.35
HDLBP-201ENST00000310931 ERBINQ96RT1 1412 aa12.86□□□□□ -0.35
HDLBP-201ENST00000310931 SCAPERQ9BY12 1400 aa12.86□□□□□ -0.35
HDLBP-201ENST00000310931 ANKRD50Q9ULJ7 1429 aa12.86□□□□□ -0.35
HDLBP-201ENST00000310931 NEFMP07197 916 aa12.86□□□□□ -0.35
HDLBP-201ENST00000310931 DEKP35659 375 aaKnown RBP12.86□□□□□ -0.35
HDLBP-201ENST00000310931 DENND4BO75064 1496 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms