RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 NUP160Q12769 1436 aa12.17□□□□□ -0.46
LCLAT1-201ENST00000309052 TROQ12816 1431 aaPredicted RBP12.17□□□□□ -0.46
LCLAT1-201ENST00000309052 ATP10BO94823 1461 aa12.16□□□□□ -0.46
LCLAT1-201ENST00000309052 KIAA0556O60303 1618 aa12.16□□□□□ -0.46
LCLAT1-201ENST00000309052 L3MBTL2Q969R5 705 aa12.15□□□□□ -0.46
LCLAT1-201ENST00000309052 UACAQ9BZF9 1416 aa12.15□□□□□ -0.46
LCLAT1-201ENST00000309052 TRHP20396 242 aaPredicted RBP12.15□□□□□ -0.46
LCLAT1-201ENST00000309052 HECW1Q76N89 1606 aa12.15□□□□□ -0.46
LCLAT1-201ENST00000309052 KIF3BO15066 747 aa12.14□□□□□ -0.47
LCLAT1-201ENST00000309052 UGGT2Q9NYU1 1516 aa12.14□□□□□ -0.47
LCLAT1-201ENST00000309052 DCAF11Q8TEB1 546 aa12.12□□□□□ -0.47
LCLAT1-201ENST00000309052 SAMD9Q5K651 1589 aa12.12□□□□□ -0.47
LCLAT1-201ENST00000309052 RAPGEF3O95398 923 aa12.12□□□□□ -0.47
LCLAT1-201ENST00000309052 EHBP1L1Q8N3D4 1523 aa12.12□□□□□ -0.47
LCLAT1-201ENST00000309052 PPP1R15AO75807 674 aaPredicted RBP12.11□□□□□ -0.47
LCLAT1-201ENST00000309052 SPAG9O60271 1321 aaKnown RBP12.11□□□□□ -0.47
LCLAT1-201ENST00000309052 NAIPQ13075 1403 aa12.11□□□□□ -0.47
LCLAT1-201ENST00000309052 ANKRD30AQ9BXX3 1397 aa12.1□□□□□ -0.47
LCLAT1-201ENST00000309052 FAM69CQ0P6D2 419 aa12.1□□□□□ -0.47
LCLAT1-201ENST00000309052 SUPT6HQ7KZ85 1726 aaKnown RBP12.1□□□□□ -0.47
LCLAT1-201ENST00000309052 NUTM2DQ5VT03 806 aaPredicted RBP12.1□□□□□ -0.47
LCLAT1-201ENST00000309052 RAPGEF6Q8TEU7 1601 aa12.09□□□□□ -0.47
LCLAT1-201ENST00000309052 CHD1O14646 1710 aa12.09□□□□□ -0.47
LCLAT1-201ENST00000309052 CENPBP07199 599 aaPredicted RBP12.09□□□□□ -0.47
LCLAT1-201ENST00000309052 KIF15Q9NS87 1388 aa12.08□□□□□ -0.48
LCLAT1-201ENST00000309052 ARHGAP5Q13017 1502 aa12.07□□□□□ -0.48
LCLAT1-201ENST00000309052 PTPN23Q9H3S7 1636 aa12.07□□□□□ -0.48
LCLAT1-201ENST00000309052 ABCC5O15440 1437 aa12.07□□□□□ -0.48
LCLAT1-201ENST00000309052 MAP3K1Q13233 1512 aa12.06□□□□□ -0.48
LCLAT1-201ENST00000309052 GPATCH8Q9UKJ3 1502 aaKnown RBP12.06□□□□□ -0.48
LCLAT1-201ENST00000309052 DAPK1P53355 1430 aa12.06□□□□□ -0.48
LCLAT1-201ENST00000309052 CLSPNQ9HAW4 1339 aa12.06□□□□□ -0.48
LCLAT1-201ENST00000309052 ARID4BQ4LE39 1312 aaPredicted RBP12.05□□□□□ -0.48
LCLAT1-201ENST00000309052 ANKRD50Q9ULJ7 1429 aa12.04□□□□□ -0.48
LCLAT1-201ENST00000309052 KIF14Q15058 1648 aa12.04□□□□□ -0.48
LCLAT1-201ENST00000309052 HFM1A2PYH4 1435 aa12.04□□□□□ -0.48
LCLAT1-201ENST00000309052 HSPA5P11021 654 aaKnown RBP12.03□□□□□ -0.48
LCLAT1-201ENST00000309052 EIF4G2P78344 907 aaKnown RBP eCLIP12.03□□□□□ -0.482e-9■■■■■ 39.4
LCLAT1-201ENST00000309052 CAMSAP2Q08AD1 1489 aa12.03□□□□□ -0.48
LCLAT1-201ENST00000309052 CFAP43Q8NDM7 1665 aa12.03□□□□□ -0.48
LCLAT1-201ENST00000309052 SCAPERQ9BY12 1400 aa12.02□□□□□ -0.48
LCLAT1-201ENST00000309052 ANP32CO43423 234 aa12.02□□□□□ -0.49
LCLAT1-201ENST00000309052 BCANQ96GW7 911 aa12.02□□□□□ -0.49
LCLAT1-201ENST00000309052 CARD11Q9BXL7 1154 aa12.02□□□□□ -0.49
LCLAT1-201ENST00000309052 C9orf84Q5VXU9 1444 aa12.01□□□□□ -0.49
LCLAT1-201ENST00000309052 MIA2Q96PC5 1412 aa12.01□□□□□ -0.49
LCLAT1-201ENST00000309052 STAG3Q9UJ98 1225 aa12.01□□□□□ -0.49
LCLAT1-201ENST00000309052 LRRIQ1Q96JM4 1722 aa12.01□□□□□ -0.49
LCLAT1-201ENST00000309052 NBPF8Q3BBV2 869 aa12□□□□□ -0.49
LCLAT1-201ENST00000309052 ESF1Q9H501 851 aaKnown RBP11.98□□□□□ -0.49
LCLAT1-201ENST00000309052 NCOA1Q15788 1441 aa11.98□□□□□ -0.49
LCLAT1-201ENST00000309052 SAFB2Q14151 953 aaKnown RBP eCLIP11.97□□□□□ -0.49
LCLAT1-201ENST00000309052 SALL2Q9Y467 1007 aaPredicted RBP11.97□□□□□ -0.49
LCLAT1-201ENST00000309052 FAM9BQ8IZU0 186 aa11.96□□□□□ -0.49
LCLAT1-201ENST00000309052 GTF3C3Q9Y5Q9 886 aa11.96□□□□□ -0.49
LCLAT1-201ENST00000309052 MAPKBP1O60336 1514 aa11.95□□□□□ -0.5
LCLAT1-201ENST00000309052 WASHC2CQ9Y4E1 1318 aa11.95□□□□□ -0.5
LCLAT1-201ENST00000309052 ASXL2Q76L83 1435 aa11.95□□□□□ -0.5
LCLAT1-201ENST00000309052 RSPH4AQ5TD94 716 aa11.94□□□□□ -0.5
LCLAT1-201ENST00000309052 KDM6BO15054 1643 aa11.93□□□□□ -0.5
LCLAT1-201ENST00000309052 TRAPPC8Q9Y2L5 1435 aa11.93□□□□□ -0.5
LCLAT1-201ENST00000309052 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.93□□□□□ -0.5
LCLAT1-201ENST00000309052 NBPF1Q3BBV0 1214 aa11.92□□□□□ -0.5
LCLAT1-201ENST00000309052 PLEKHH2Q8IVE3 1493 aa11.92□□□□□ -0.5
LCLAT1-201ENST00000309052 SYCP2Q9BX26 1530 aa11.91□□□□□ -0.5
LCLAT1-201ENST00000309052 ST20-MTHFSA0A0A6YYL1 179 aa11.91□□□□□ -0.5
LCLAT1-201ENST00000309052 AKNAQ7Z591 1439 aa11.91□□□□□ -0.5
LCLAT1-201ENST00000309052 CD109Q6YHK3 1445 aa11.91□□□□□ -0.5
LCLAT1-201ENST00000309052 ABCA8O94911 1581 aa11.9□□□□□ -0.5
LCLAT1-201ENST00000309052 STK26Q9P289 416 aa11.9□□□□□ -0.51
LCLAT1-201ENST00000309052 ACIN1Q9UKV3 1341 aaKnown RBP11.89□□□□□ -0.51
LCLAT1-201ENST00000309052 ABCC2Q92887 1545 aa11.89□□□□□ -0.51
LCLAT1-201ENST00000309052 C11orf95C9JLR9 678 aaPredicted RBP11.88□□□□□ -0.51
LCLAT1-201ENST00000309052 FANCAO15360 1455 aa11.88□□□□□ -0.51
LCLAT1-201ENST00000309052 CCDC141Q6ZP82 1450 aa11.87□□□□□ -0.51
LCLAT1-201ENST00000309052 PLEKHG5O94827 1062 aa11.87□□□□□ -0.51
LCLAT1-201ENST00000309052 TIMELESSQ9UNS1 1208 aa11.87□□□□□ -0.51
LCLAT1-201ENST00000309052 CCDC144AA2RUR9 1427 aa11.87□□□□□ -0.51
LCLAT1-201ENST00000309052 HNRNPUQ00839 825 aaKnown RBP eCLIP11.87□□□□□ -0.51
LCLAT1-201ENST00000309052 ANKRD30BQ9BXX2 1392 aa11.86□□□□□ -0.51
LCLAT1-201ENST00000309052 ADGRL1O94910 1474 aa11.86□□□□□ -0.51
LCLAT1-201ENST00000309052 MRS2Q9HD23 443 aa11.86□□□□□ -0.51
LCLAT1-201ENST00000309052 SCAF1Q9H7N4 1312 aaKnown RBP11.85□□□□□ -0.51
LCLAT1-201ENST00000309052 KANK1Q14678 1352 aa11.85□□□□□ -0.51
LCLAT1-201ENST00000309052 CFAP65Q6ZU64 1925 aaKnown RBP11.85□□□□□ -0.51
LCLAT1-201ENST00000309052 PLCH2O75038 1416 aa11.85□□□□□ -0.51
LCLAT1-201ENST00000309052 TMC1Q8TDI8 760 aa11.85□□□□□ -0.51
LCLAT1-201ENST00000309052 ROCK2O75116 1388 aaKnown RBP11.85□□□□□ -0.51
LCLAT1-201ENST00000309052 ROCK1Q13464 1354 aa11.84□□□□□ -0.51
LCLAT1-201ENST00000309052 TMEM132EQ6IEE7 984 aa11.84□□□□□ -0.51
LCLAT1-201ENST00000309052 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.84□□□□□ -0.51
LCLAT1-201ENST00000309052 TCOF1Q13428 1488 aaKnown RBP11.84□□□□□ -0.51
LCLAT1-201ENST00000309052 CC2D1BQ5T0F9 858 aaKnown RBP11.84□□□□□ -0.51
LCLAT1-201ENST00000309052 ABCC10Q5T3U5 1492 aa11.84□□□□□ -0.51
LCLAT1-201ENST00000309052 WDR7Q9Y4E6 1490 aa11.84□□□□□ -0.51
LCLAT1-201ENST00000309052 TTC37Q6PGP7 1564 aa11.83□□□□□ -0.51
LCLAT1-201ENST00000309052 TNNT2P45379 298 aaPredicted RBP11.83□□□□□ -0.52
LCLAT1-201ENST00000309052 TRAK1Q9UPV9 953 aa11.83□□□□□ -0.52
LCLAT1-201ENST00000309052 WASHC2AQ641Q2 1341 aa11.83□□□□□ -0.52
LCLAT1-201ENST00000309052 KIAA1107Q9UPP5 1409 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms