RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 EHBP1L1Q8N3D4 1523 aa14.96□□□□□ -0.01
PTPN7-201ENST00000309017 PRDM2Q13029 1718 aa14.95□□□□□ -0.02
PTPN7-201ENST00000309017 TOPBP1Q92547 1522 aa14.95□□□□□ -0.02
PTPN7-201ENST00000309017 ZNF777Q9ULD5 760 aaPredicted RBP14.94□□□□□ -0.02
PTPN7-201ENST00000309017 LAS1LQ9Y4W2 734 aaKnown RBP14.93□□□□□ -0.02
PTPN7-201ENST00000309017 SMG6Q86US8 1419 aaKnown RBP14.93□□□□□ -0.02
PTPN7-201ENST00000309017 DNMBPQ6XZF7 1577 aa14.93□□□□□ -0.02
PTPN7-201ENST00000309017 CTTNBP2Q8WZ74 1663 aa14.92□□□□□ -0.02
PTPN7-201ENST00000309017 CUL7Q14999 1698 aa14.92□□□□□ -0.02
PTPN7-201ENST00000309017 GRIN2BQ13224 1484 aa14.91□□□□□ -0.02
PTPN7-201ENST00000309017 CC2D2AQ9P2K1 1620 aa14.91□□□□□ -0.02
PTPN7-201ENST00000309017 RTN4Q9NQC3 1192 aaKnown RBP14.9□□□□□ -0.02
PTPN7-201ENST00000309017 KDM2AQ9Y2K7 1162 aa14.9□□□□□ -0.02
PTPN7-201ENST00000309017 UGGT2Q9NYU1 1516 aa14.89□□□□□ -0.03
PTPN7-201ENST00000309017 ZNF644Q9H582 1327 aaPredicted RBP14.89□□□□□ -0.03
PTPN7-201ENST00000309017 NESP48681 1621 aa14.89□□□□□ -0.03
PTPN7-201ENST00000309017 ANKRD30BQ9BXX2 1392 aa14.89□□□□□ -0.03
PTPN7-201ENST00000309017 USP47Q96K76 1375 aa14.88□□□□□ -0.03
PTPN7-201ENST00000309017 NEFMP07197 916 aa14.88□□□□□ -0.03
PTPN7-201ENST00000309017 GAPVD1Q14C86 1478 aa14.88□□□□□ -0.03
PTPN7-201ENST00000309017 CARD11Q9BXL7 1154 aa14.87□□□□□ -0.03
PTPN7-201ENST00000309017 DENND4BO75064 1496 aaPredicted RBP14.87□□□□□ -0.03
PTPN7-201ENST00000309017 KDM6BO15054 1643 aa14.87□□□□□ -0.03
PTPN7-201ENST00000309017 HECW1Q76N89 1606 aa14.86□□□□□ -0.03
PTPN7-201ENST00000309017 RPRD2Q5VT52 1461 aaKnown RBP14.86□□□□□ -0.03
PTPN7-201ENST00000309017 EXOC6Q8TAG9 804 aa14.86□□□□□ -0.03
PTPN7-201ENST00000309017 PKD2Q13563 968 aa14.85□□□□□ -0.03
PTPN7-201ENST00000309017 PNISRQ8TF01 805 aaKnown RBP14.84□□□□□ -0.03
PTPN7-201ENST00000309017 DAXXQ9UER7 740 aaPredicted RBP14.84□□□□□ -0.03
PTPN7-201ENST00000309017 MAGI3Q5TCQ9 1506 aa14.84□□□□□ -0.03
PTPN7-201ENST00000309017 RCAN3Q9UKA8 241 aa14.83□□□□□ -0.03
PTPN7-201ENST00000309017 CDK13Q14004 1512 aaKnown RBP14.83□□□□□ -0.03
PTPN7-201ENST00000309017 MIA2Q96PC5 1412 aa14.83□□□□□ -0.04
PTPN7-201ENST00000309017 RRP1P56182 461 aaKnown RBP14.83□□□□□ -0.04
PTPN7-201ENST00000309017 CFDP1Q9UEE9 299 aaPredicted RBP14.82□□□□□ -0.04
PTPN7-201ENST00000309017 TCOF1Q13428 1488 aaKnown RBP14.82□□□□□ -0.04
PTPN7-201ENST00000309017 TCERG1O14776 1098 aaKnown RBP14.82□□□□□ -0.04
PTPN7-201ENST00000309017 PDE4AP27815 886 aa14.81□□□□□ -0.04
PTPN7-201ENST00000309017 THOC2Q8NI27 1593 aaKnown RBP14.81□□□□□ -0.04
PTPN7-201ENST00000309017 EPRSP07814 1512 aaKnown RBP14.81□□□□□ -0.04
PTPN7-201ENST00000309017 GCC2Q8IWJ2 1684 aa14.81□□□□□ -0.04
PTPN7-201ENST00000309017 SAMD9Q5K651 1589 aa14.8□□□□□ -0.04
PTPN7-201ENST00000309017 DAPK1P53355 1430 aa14.8□□□□□ -0.04
PTPN7-201ENST00000309017 DHX29Q7Z478 1369 aaKnown RBP14.8□□□□□ -0.04
PTPN7-201ENST00000309017 SPATA31E1Q6ZUB1 1445 aa14.8□□□□□ -0.04
PTPN7-201ENST00000309017 LRRIQ1Q96JM4 1722 aa14.79□□□□□ -0.04
PTPN7-201ENST00000309017 IL27Q8NEV9 243 aa14.79□□□□□ -0.04
PTPN7-201ENST00000309017 TEX14Q8IWB6 1497 aa14.79□□□□□ -0.04
PTPN7-201ENST00000309017 RNF123Q5XPI4 1314 aa14.78□□□□□ -0.04
PTPN7-201ENST00000309017 ST20-MTHFSA0A0A6YYL1 179 aa14.78□□□□□ -0.04
PTPN7-201ENST00000309017 ANO8Q9HCE9 1232 aaPredicted RBP14.78□□□□□ -0.04
PTPN7-201ENST00000309017 KIF15Q9NS87 1388 aa14.78□□□□□ -0.04
PTPN7-201ENST00000309017 MYBBP1AQ9BQG0 1328 aaKnown RBP14.77□□□□□ -0.05
PTPN7-201ENST00000309017 ROCK2O75116 1388 aaKnown RBP14.76□□□□□ -0.05
PTPN7-201ENST00000309017 PPM1GO15355 546 aaPredicted RBP14.76□□□□□ -0.05
PTPN7-201ENST00000309017 DCAF11Q8TEB1 546 aa14.76□□□□□ -0.05
PTPN7-201ENST00000309017 ABCC5O15440 1437 aa14.76□□□□□ -0.05
PTPN7-201ENST00000309017 PLIN1O60240 522 aa14.76□□□□□ -0.05
PTPN7-201ENST00000309017 ROCK1Q13464 1354 aa14.75□□□□□ -0.05
PTPN7-201ENST00000309017 RALBP1Q15311 655 aa14.75□□□□□ -0.05
PTPN7-201ENST00000309017 ARHGEF11O15085 1522 aa14.75□□□□□ -0.05
PTPN7-201ENST00000309017 URB2Q14146 1524 aaKnown RBP14.75□□□□□ -0.05
PTPN7-201ENST00000309017 ARID4BQ4LE39 1312 aaPredicted RBP14.73□□□□□ -0.05
PTPN7-201ENST00000309017 CC2D1BQ5T0F9 858 aaKnown RBP14.72□□□□□ -0.05
PTPN7-201ENST00000309017 CDCA7LQ96GN5 454 aa14.72□□□□□ -0.05
PTPN7-201ENST00000309017 BACH2Q9BYV9 841 aa14.72□□□□□ -0.05
PTPN7-201ENST00000309017 NLRP13Q86W25 1043 aa14.71□□□□□ -0.05
PTPN7-201ENST00000309017 SKAP1Q86WV1 359 aa14.71□□□□□ -0.05
PTPN7-201ENST00000309017 DDRGK1Q96HY6 314 aa14.71□□□□□ -0.05
PTPN7-201ENST00000309017 NUP155O75694 1391 aa14.71□□□□□ -0.05
PTPN7-201ENST00000309017 BRD4O60885 1362 aaPredicted RBP14.71□□□□□ -0.06
PTPN7-201ENST00000309017 KIAA1107Q9UPP5 1409 aa14.7□□□□□ -0.06
PTPN7-201ENST00000309017 RGL3Q3MIN7 710 aa14.7□□□□□ -0.06
PTPN7-201ENST00000309017 USP35Q9P2H5 1018 aa14.7□□□□□ -0.06
PTPN7-201ENST00000309017 KTN1Q86UP2 1357 aaKnown RBP14.69□□□□□ -0.06
PTPN7-201ENST00000309017 MS4A1P11836 297 aa14.69□□□□□ -0.06
PTPN7-201ENST00000309017 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.69□□□□□ -0.06
PTPN7-201ENST00000309017 SLC4A3P48751 1232 aa14.69□□□□□ -0.06
PTPN7-201ENST00000309017 FBLN2P98095 1184 aa14.69□□□□□ -0.06
PTPN7-201ENST00000309017 PDE3BQ13370 1112 aa14.68□□□□□ -0.06
PTPN7-201ENST00000309017 LAMC3Q9Y6N6 1575 aa14.68□□□□□ -0.06
PTPN7-201ENST00000309017 PRKCSHP14314 528 aaPredicted RBP14.68□□□□□ -0.06
PTPN7-201ENST00000309017 CRBNQ96SW2 442 aa14.68□□□□□ -0.06
PTPN7-201ENST00000309017 ANKRD30AQ9BXX3 1397 aa14.68□□□□□ -0.06
PTPN7-201ENST00000309017 PDS5BQ9NTI5 1447 aa14.67□□□□□ -0.06
PTPN7-201ENST00000309017 TSPY4P0CV99 314 aa14.67□□□□□ -0.06
PTPN7-201ENST00000309017 TSPY10P0CW01 314 aa14.67□□□□□ -0.06
PTPN7-201ENST00000309017 IQGAP2Q13576 1575 aa14.67□□□□□ -0.06
PTPN7-201ENST00000309017 ABCA5Q8WWZ7 1642 aa14.65□□□□□ -0.06
PTPN7-201ENST00000309017 PZPP20742 1482 aa14.65□□□□□ -0.06
PTPN7-201ENST00000309017 BCORL1Q5H9F3 1711 aa14.64□□□□□ -0.07
PTPN7-201ENST00000309017 PRG4Q92954 1404 aaPredicted RBP14.63□□□□□ -0.07
PTPN7-201ENST00000309017 ANKRD50Q9ULJ7 1429 aa14.63□□□□□ -0.07
PTPN7-201ENST00000309017 LRPPRCP42704 1394 aaKnown RBP14.63□□□□□ -0.07
PTPN7-201ENST00000309017 KIF21AQ7Z4S6 1674 aa14.62□□□□□ -0.07
PTPN7-201ENST00000309017 WDR62O43379 1518 aa14.62□□□□□ -0.07
PTPN7-201ENST00000309017 RGS3P49796 1198 aa14.62□□□□□ -0.07
PTPN7-201ENST00000309017 DNMT1P26358 1616 aaKnown RBP14.62□□□□□ -0.07
PTPN7-201ENST00000309017 EIF5BO60841 1220 aaKnown RBP14.62□□□□□ -0.07
PTPN7-201ENST00000309017 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms