RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 SCAPERQ9BY12 1400 aa32.1■■■□□ 2.73
PDZRN3-202ENST00000308537 PREX2Q70Z35 1606 aa32.09■■■□□ 2.73
PDZRN3-202ENST00000308537 EFCAB2Q5VUJ9 269 aa32.07■■■□□ 2.72
PDZRN3-202ENST00000308537 ADAMTSL3P82987 1691 aa32.07■■■□□ 2.72
PDZRN3-202ENST00000308537 SIGLEC1Q9BZZ2 1709 aa32.06■■■□□ 2.72
PDZRN3-202ENST00000308537 YEATS2Q9ULM3 1422 aa32.06■■■□□ 2.72
PDZRN3-202ENST00000308537 CDC42BPAQ5VT25 1732 aa32.06■■■□□ 2.72
PDZRN3-202ENST00000308537 ARHGAP5Q13017 1502 aa32.05■■■□□ 2.72
PDZRN3-202ENST00000308537 MAGI2Q86UL8 1455 aa32.03■■■□□ 2.72
PDZRN3-202ENST00000308537 LOC105371045A0A1W2PR82 267 aa32.02■■■□□ 2.72
PDZRN3-202ENST00000308537 BCORL1Q5H9F3 1711 aa32.02■■■□□ 2.72
PDZRN3-202ENST00000308537 ZFYVE16Q7Z3T8 1539 aa32.01■■■□□ 2.72
PDZRN3-202ENST00000308537 KDM5CP41229 1560 aa31.99■■■□□ 2.71
PDZRN3-202ENST00000308537 ARHGEF12Q9NZN5 1544 aa31.97■■■□□ 2.71
PDZRN3-202ENST00000308537 ABCC1P33527 1531 aa31.96■■■□□ 2.71
PDZRN3-202ENST00000308537 GPATCH8Q9UKJ3 1502 aaKnown RBP31.94■■■□□ 2.7
PDZRN3-202ENST00000308537 ZNF518AQ6AHZ1 1483 aa31.93■■■□□ 2.7
PDZRN3-202ENST00000308537 ITSN2Q9NZM3 1697 aa31.92■■■□□ 2.7
PDZRN3-202ENST00000308537 MADDQ8WXG6 1647 aa31.91■■■□□ 2.7
PDZRN3-202ENST00000308537 AFAP1Q8N556 730 aa31.88■■■□□ 2.69
PDZRN3-202ENST00000308537 TRAPPC8Q9Y2L5 1435 aa31.88■■■□□ 2.69
PDZRN3-202ENST00000308537 SAMD9LQ8IVG5 1584 aa31.88■■■□□ 2.69
PDZRN3-202ENST00000308537 PTPRMP28827 1452 aa31.87■■■□□ 2.69
PDZRN3-202ENST00000308537 HECW2Q9P2P5 1572 aa31.85■■■□□ 2.69
PDZRN3-202ENST00000308537 EHBP1L1Q8N3D4 1523 aa31.85■■■□□ 2.69
PDZRN3-202ENST00000308537 ATP10AO60312 1499 aa31.84■■■□□ 2.69
PDZRN3-202ENST00000308537 MTUS2Q5JR59 1369 aa31.83■■■□□ 2.69
PDZRN3-202ENST00000308537 MLH3Q9UHC1 1453 aa31.83■■■□□ 2.69
PDZRN3-202ENST00000308537 DIP2CQ9Y2E4 1556 aa31.82■■■□□ 2.68
PDZRN3-202ENST00000308537 ARID4BQ4LE39 1312 aaPredicted RBP31.81■■■□□ 2.68
PDZRN3-202ENST00000308537 VPS8Q8N3P4 1428 aa31.81■■■□□ 2.68
PDZRN3-202ENST00000308537 TIAM1Q13009 1591 aa31.81■■■□□ 2.68
PDZRN3-202ENST00000308537 ABCA6Q8N139 1617 aa31.8■■■□□ 2.68
PDZRN3-202ENST00000308537 C9orf84Q5VXU9 1444 aa31.8■■■□□ 2.68
PDZRN3-202ENST00000308537 RIMS1Q86UR5 1692 aaKnown RBP31.77■■■□□ 2.68
PDZRN3-202ENST00000308537 KIDINS220Q9ULH0 1771 aa31.77■■■□□ 2.68
PDZRN3-202ENST00000308537 REREQ9P2R6 1566 aa31.77■■■□□ 2.68
PDZRN3-202ENST00000308537 SYCP2Q9BX26 1530 aa31.76■■■□□ 2.68
PDZRN3-202ENST00000308537 CCNB3Q8WWL7 1395 aa31.73■■■□□ 2.67
PDZRN3-202ENST00000308537 KIAA1107Q9UPP5 1409 aa31.72■■■□□ 2.67
PDZRN3-202ENST00000308537 FER1L4A9Z1Z3 1794 aa31.68■■■□□ 2.66
PDZRN3-202ENST00000308537 CFDP1Q9UEE9 299 aaPredicted RBP31.68■■■□□ 2.66
PDZRN3-202ENST00000308537 ZNF777Q9ULD5 760 aaPredicted RBP31.68■■■□□ 2.66
PDZRN3-202ENST00000308537 NCOA2Q15596 1464 aa31.67■■■□□ 2.66
PDZRN3-202ENST00000308537 SUPT6HQ7KZ85 1726 aaKnown RBP31.66■■■□□ 2.66
PDZRN3-202ENST00000308537 PLEKHH2Q8IVE3 1493 aa31.65■■■□□ 2.66
PDZRN3-202ENST00000308537 HNRNPMP52272 730 aaKnown RBP eCLIP31.64■■■□□ 2.66
PDZRN3-202ENST00000308537 AGLP35573 1532 aa31.64■■■□□ 2.66
PDZRN3-202ENST00000308537 LRRC9Q6ZRR7 1453 aa31.63■■■□□ 2.65
PDZRN3-202ENST00000308537 MBD5Q9P267 1494 aa31.63■■■□□ 2.65
PDZRN3-202ENST00000308537 MAP3K1Q13233 1512 aa31.63■■■□□ 2.65
PDZRN3-202ENST00000308537 INO80Q9ULG1 1556 aaPredicted RBP31.63■■■□□ 2.65
PDZRN3-202ENST00000308537 MLECQ14165 292 aa31.62■■■□□ 2.65
PDZRN3-202ENST00000308537 ZNF644Q9H582 1327 aaPredicted RBP31.62■■■□□ 2.65
PDZRN3-202ENST00000308537 ATP7AQ04656 1500 aa31.58■■■□□ 2.65
PDZRN3-202ENST00000308537 LMTK3Q96Q04 1460 aa31.55■■■□□ 2.64
PDZRN3-202ENST00000308537 SPAG9O60271 1321 aaKnown RBP31.53■■■□□ 2.64
PDZRN3-202ENST00000308537 PLXNC1O60486 1568 aa31.53■■■□□ 2.64
PDZRN3-202ENST00000308537 KANK4Q5T7N3 995 aaPredicted RBP31.53■■■□□ 2.64
PDZRN3-202ENST00000308537 MYT1LQ9UL68 1186 aa31.53■■■□□ 2.64
PDZRN3-202ENST00000308537 CAMSAP2Q08AD1 1489 aa31.49■■■□□ 2.63
PDZRN3-202ENST00000308537 A2MP01023 1474 aa31.42■■■□□ 2.62
PDZRN3-202ENST00000308537 ADGBQ8N7X0 1667 aa31.41■■■□□ 2.62
PDZRN3-202ENST00000308537 RTEL1-TNFRSF6BF6WH68 1400 aa31.41■■■□□ 2.62
PDZRN3-202ENST00000308537 ARHGEF5Q12774 1597 aa31.41■■■□□ 2.62
PDZRN3-202ENST00000308537 CCDC141Q6ZP82 1450 aa31.4■■■□□ 2.62
PDZRN3-202ENST00000308537 C3P01024 1663 aa31.4■■■□□ 2.62
PDZRN3-202ENST00000308537 CEBPAP49715 358 aaPredicted RBP31.39■■■□□ 2.62
PDZRN3-202ENST00000308537 PLPPR3Q6T4P5 718 aa31.38■■■□□ 2.61
PDZRN3-202ENST00000308537 MYOM3Q5VTT5 1437 aa31.34■■■□□ 2.61
PDZRN3-202ENST00000308537 PREX1Q8TCU6 1659 aa31.34■■■□□ 2.61
PDZRN3-202ENST00000308537 SETD1BQ9UPS6 1966 aaKnown RBP31.32■■■□□ 2.6
PDZRN3-202ENST00000308537 MIA2Q96PC5 1412 aa31.32■■■□□ 2.6
PDZRN3-202ENST00000308537 MROH2AA6NES4 1674 aa31.31■■■□□ 2.6
PDZRN3-202ENST00000308537 CNTLNQ9NXG0 1405 aa31.3■■■□□ 2.6
PDZRN3-202ENST00000308537 RSPH4AQ5TD94 716 aa31.29■■■□□ 2.6
PDZRN3-202ENST00000308537 HSPA2P54652 639 aa31.28■■■□□ 2.6
PDZRN3-202ENST00000308537 DHX29Q7Z478 1369 aaKnown RBP31.27■■■□□ 2.6
PDZRN3-202ENST00000308537 MAST1Q9Y2H9 1570 aa31.26■■■□□ 2.59
PDZRN3-202ENST00000308537 CLTCQ00610 1675 aaKnown RBP31.24■■■□□ 2.59
PDZRN3-202ENST00000308537 ZMYM3Q14202 1370 aa31.18■■■□□ 2.58
PDZRN3-202ENST00000308537 PTPN23Q9H3S7 1636 aa31.16■■■□□ 2.58
PDZRN3-202ENST00000308537 UHRF1BP1Q6BDS2 1440 aa31.16■■■□□ 2.58
PDZRN3-202ENST00000308537 APLP2Q06481 763 aa31.15■■■□□ 2.58
PDZRN3-202ENST00000308537 GGT6Q6P531 493 aa31.15■■■□□ 2.58
PDZRN3-202ENST00000308537 ESF1Q9H501 851 aaKnown RBP31.15■■■□□ 2.58
PDZRN3-202ENST00000308537 NPATQ14207 1427 aa31.15■■■□□ 2.58
PDZRN3-202ENST00000308537 TCOF1Q13428 1488 aaKnown RBP31.14■■■□□ 2.57
PDZRN3-202ENST00000308537 PPP6R1Q9UPN7 881 aa31.13■■■□□ 2.57
PDZRN3-202ENST00000308537 FGD6Q6ZV73 1430 aa31.13■■■□□ 2.57
PDZRN3-202ENST00000308537 CROCC2H7BZ55 1655 aa31.13■■■□□ 2.57
PDZRN3-202ENST00000308537 STRCQ7RTU9 1775 aa31.12■■■□□ 2.57
PDZRN3-202ENST00000308537 TSPY4P0CV99 314 aa31.11■■■□□ 2.57
PDZRN3-202ENST00000308537 TSPY10P0CW01 314 aa31.11■■■□□ 2.57
PDZRN3-202ENST00000308537 ABCC5O15440 1437 aa31.1■■■□□ 2.57
PDZRN3-202ENST00000308537 PTPRKQ15262 1439 aa31.1■■■□□ 2.57
PDZRN3-202ENST00000308537 KIF3BO15066 747 aa31.08■■■□□ 2.57
PDZRN3-202ENST00000308537 FAM135AQ9P2D6 1515 aa31.08■■■□□ 2.57
PDZRN3-202ENST00000308537 DNMT1P26358 1616 aaKnown RBP31.07■■■□□ 2.56
PDZRN3-202ENST00000308537 RNF17Q9BXT8 1623 aaKnown RBP31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms