RNA–Protein interactions for RNA: ENST00000308162.9

CFL1-201, Transcript of cofilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFL1, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Lamellipodium, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFL1-201ENST00000308162 PREX2Q70Z35 1606 aa29.68■■■□□ 2.34
CFL1-201ENST00000308162 TIAM1Q13009 1591 aa29.68■■■□□ 2.34
CFL1-201ENST00000308162 CDC42BPBQ9Y5S2 1711 aa29.67■■■□□ 2.34
CFL1-201ENST00000308162 GPATCH8Q9UKJ3 1502 aaKnown RBP29.65■■■□□ 2.34
CFL1-201ENST00000308162 RICTORQ6R327 1708 aa29.65■■■□□ 2.34
CFL1-201ENST00000308162 CCNB3Q8WWL7 1395 aa29.64■■■□□ 2.33
CFL1-201ENST00000308162 CDC42BPAQ5VT25 1732 aa29.63■■■□□ 2.33
CFL1-201ENST00000308162 POGZQ7Z3K3 1410 aa29.62■■■□□ 2.33
CFL1-201ENST00000308162 MAP3K1Q13233 1512 aa29.62■■■□□ 2.33
CFL1-201ENST00000308162 ZMYM4Q5VZL5 1548 aa29.58■■■□□ 2.33
CFL1-201ENST00000308162 LRRC9Q6ZRR7 1453 aa29.58■■■□□ 2.33
CFL1-201ENST00000308162 CFDP1Q9UEE9 299 aaPredicted RBP29.57■■■□□ 2.32
CFL1-201ENST00000308162 KDM4FA0A1W2PPD8 638 aa29.56■■■□□ 2.32
CFL1-201ENST00000308162 AEBP2Q6ZN18 517 aaPredicted RBP29.55■■■□□ 2.32
CFL1-201ENST00000308162 ZNF777Q9ULD5 760 aaPredicted RBP29.55■■■□□ 2.32
CFL1-201ENST00000308162 ZNF518AQ6AHZ1 1483 aa29.55■■■□□ 2.32
CFL1-201ENST00000308162 APLP2Q06481 763 aa29.54■■■□□ 2.32
CFL1-201ENST00000308162 ABCC1P33527 1531 aa29.54■■■□□ 2.32
CFL1-201ENST00000308162 NCOA2Q15596 1464 aa29.54■■■□□ 2.32
CFL1-201ENST00000308162 MAGI2Q86UL8 1455 aa29.54■■■□□ 2.32
CFL1-201ENST00000308162 SUPT6HQ7KZ85 1726 aaKnown RBP29.54■■■□□ 2.32
CFL1-201ENST00000308162 KANK4Q5T7N3 995 aaPredicted RBP29.53■■■□□ 2.32
CFL1-201ENST00000308162 AFAP1Q8N556 730 aa29.52■■■□□ 2.32
CFL1-201ENST00000308162 ARHGEF12Q9NZN5 1544 aa29.51■■■□□ 2.32
CFL1-201ENST00000308162 ARHGEF40Q8TER5 1519 aa29.5■■■□□ 2.31
CFL1-201ENST00000308162 SAMD9LQ8IVG5 1584 aa29.49■■■□□ 2.31
CFL1-201ENST00000308162 ZFYVE16Q7Z3T8 1539 aa29.49■■■□□ 2.31
CFL1-201ENST00000308162 YEATS2Q9ULM3 1422 aa29.48■■■□□ 2.31
CFL1-201ENST00000308162 TRAPPC8Q9Y2L5 1435 aa29.47■■■□□ 2.31
CFL1-201ENST00000308162 KDM5CP41229 1560 aa29.47■■■□□ 2.31
CFL1-201ENST00000308162 ITSN2Q9NZM3 1697 aa29.47■■■□□ 2.31
CFL1-201ENST00000308162 PLEKHH2Q8IVE3 1493 aa29.45■■■□□ 2.31
CFL1-201ENST00000308162 KIAA1107Q9UPP5 1409 aa29.45■■■□□ 2.3
CFL1-201ENST00000308162 SYCP2Q9BX26 1530 aa29.43■■■□□ 2.3
CFL1-201ENST00000308162 HNRNPMP52272 730 aaKnown RBP eCLIP29.42■■■□□ 2.33e-7■■■■□ 25.1
CFL1-201ENST00000308162 ZNF644Q9H582 1327 aaPredicted RBP29.41■■■□□ 2.3
CFL1-201ENST00000308162 ARID4BQ4LE39 1312 aaPredicted RBP29.4■■■□□ 2.3
CFL1-201ENST00000308162 MYT1LQ9UL68 1186 aa29.39■■■□□ 2.3
CFL1-201ENST00000308162 MLH3Q9UHC1 1453 aa29.39■■■□□ 2.3
CFL1-201ENST00000308162 HECW2Q9P2P5 1572 aa29.38■■■□□ 2.29
CFL1-201ENST00000308162 ATP10AO60312 1499 aa29.37■■■□□ 2.29
CFL1-201ENST00000308162 C9orf84Q5VXU9 1444 aa29.33■■■□□ 2.29
CFL1-201ENST00000308162 MBD5Q9P267 1494 aa29.31■■■□□ 2.28
CFL1-201ENST00000308162 SPAG9O60271 1321 aaKnown RBP29.31■■■□□ 2.28
CFL1-201ENST00000308162 CAMSAP2Q08AD1 1489 aa29.3■■■□□ 2.28
CFL1-201ENST00000308162 MYOM3Q5VTT5 1437 aa29.3■■■□□ 2.28
CFL1-201ENST00000308162 DIP2CQ9Y2E4 1556 aa29.29■■■□□ 2.28
CFL1-201ENST00000308162 BCORL1Q5H9F3 1711 aa29.27■■■□□ 2.28
CFL1-201ENST00000308162 SIGLEC1Q9BZZ2 1709 aa29.27■■■□□ 2.28
CFL1-201ENST00000308162 MIA2Q96PC5 1412 aa29.27■■■□□ 2.28
CFL1-201ENST00000308162 KIDINS220Q9ULH0 1771 aa29.26■■■□□ 2.28
CFL1-201ENST00000308162 ABCA6Q8N139 1617 aa29.26■■■□□ 2.27
CFL1-201ENST00000308162 ADAMTSL3P82987 1691 aa29.25■■■□□ 2.27
CFL1-201ENST00000308162 RSPH4AQ5TD94 716 aa29.24■■■□□ 2.27
CFL1-201ENST00000308162 REREQ9P2R6 1566 aa29.22■■■□□ 2.27
CFL1-201ENST00000308162 ATP7AQ04656 1500 aa29.22■■■□□ 2.27
CFL1-201ENST00000308162 CCDC141Q6ZP82 1450 aa29.21■■■□□ 2.27
CFL1-201ENST00000308162 INO80Q9ULG1 1556 aaPredicted RBP29.2■■■□□ 2.26
CFL1-201ENST00000308162 MLECQ14165 292 aa29.19■■■□□ 2.26
CFL1-201ENST00000308162 RTEL1-TNFRSF6BF6WH68 1400 aa29.17■■■□□ 2.26
CFL1-201ENST00000308162 ARHGEF5Q12774 1597 aa29.17■■■□□ 2.26
CFL1-201ENST00000308162 MADDQ8WXG6 1647 aa29.16■■■□□ 2.26
CFL1-201ENST00000308162 AGLP35573 1532 aa29.14■■■□□ 2.25
CFL1-201ENST00000308162 FGD6Q6ZV73 1430 aa29.12■■■□□ 2.25
CFL1-201ENST00000308162 PTPRMP28827 1452 aa29.12■■■□□ 2.25
CFL1-201ENST00000308162 TSPY4P0CV99 314 aa29.12■■■□□ 2.25
CFL1-201ENST00000308162 TSPY10P0CW01 314 aa29.12■■■□□ 2.25
CFL1-201ENST00000308162 A2MP01023 1474 aa29.1■■■□□ 2.25
CFL1-201ENST00000308162 PTPN23Q9H3S7 1636 aa29.09■■■□□ 2.25
CFL1-201ENST00000308162 RIMS1Q86UR5 1692 aaKnown RBP29.05■■■□□ 2.24
CFL1-201ENST00000308162 TCOF1Q13428 1488 aaKnown RBP29.05■■■□□ 2.24
CFL1-201ENST00000308162 PLXNC1O60486 1568 aa29.05■■■□□ 2.24
CFL1-201ENST00000308162 ADGBQ8N7X0 1667 aa29.04■■■□□ 2.24
CFL1-201ENST00000308162 FER1L4A9Z1Z3 1794 aa29.02■■■□□ 2.24
CFL1-201ENST00000308162 DHX29Q7Z478 1369 aaKnown RBP29.01■■■□□ 2.24
CFL1-201ENST00000308162 MAST1Q9Y2H9 1570 aa29.01■■■□□ 2.23
CFL1-201ENST00000308162 PPARGC1BQ86YN6 1023 aaKnown RBP29■■■□□ 2.23
CFL1-201ENST00000308162 ABCC5O15440 1437 aa28.99■■■□□ 2.23
CFL1-201ENST00000308162 ESF1Q9H501 851 aaKnown RBP28.96■■■□□ 2.23
CFL1-201ENST00000308162 DAPK1P53355 1430 aa28.95■■■□□ 2.23
CFL1-201ENST00000308162 SHANK2Q9UPX8 1470 aa28.94■■■□□ 2.22
CFL1-201ENST00000308162 FAM50AQ14320 339 aaKnown RBP28.94■■■□□ 2.22
CFL1-201ENST00000308162 PLPPR3Q6T4P5 718 aa28.94■■■□□ 2.22
CFL1-201ENST00000308162 DNMT1P26358 1616 aaKnown RBP28.94■■■□□ 2.22
CFL1-201ENST00000308162 GGT6Q6P531 493 aa28.91■■■□□ 2.22
CFL1-201ENST00000308162 CROCC2H7BZ55 1655 aa28.89■■■□□ 2.22
CFL1-201ENST00000308162 CNTLNQ9NXG0 1405 aa28.89■■■□□ 2.22
CFL1-201ENST00000308162 KIF3BO15066 747 aa28.89■■■□□ 2.22
CFL1-201ENST00000308162 CEBPAP49715 358 aaPredicted RBP28.88■■■□□ 2.21
CFL1-201ENST00000308162 PPP6R1Q9UPN7 881 aa28.87■■■□□ 2.21
CFL1-201ENST00000308162 RRP7BPQ9NSQ0 103 aa28.83■■■□□ 2.21
CFL1-201ENST00000308162 CHIC2Q9UKJ5 165 aa28.83■■■□□ 2.21
CFL1-201ENST00000308162 KIF15Q9NS87 1388 aa28.83■■■□□ 2.21
CFL1-201ENST00000308162 DUOX2Q9NRD8 1548 aa28.82■■■□□ 2.2
CFL1-201ENST00000308162 ANKRD30AQ9BXX3 1397 aa28.8■■■□□ 2.2
CFL1-201ENST00000308162 ZMYM3Q14202 1370 aa28.79■■■□□ 2.2
CFL1-201ENST00000308162 C3P01024 1663 aa28.78■■■□□ 2.2
CFL1-201ENST00000308162 NCOA1Q15788 1441 aa28.77■■■□□ 2.2
CFL1-201ENST00000308162 MROH2AA6NES4 1674 aa28.77■■■□□ 2.2
CFL1-201ENST00000308162 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.76■■■□□ 2.24e-13■□□□□ 9
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms