RNA–Protein interactions for RNA: ENST00000307289.10

SYVN1-202, Transcript of synoviolin 1, humanhuman

TSL 1 (best) BASIC

Gene SYVN1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-202ENST00000307289 GCC2Q8IWJ2 1684 aa23.3■■□□□ 1.32
SYVN1-202ENST00000307289 CDK11AQ9UQ88 783 aaPredicted RBP23.28■■□□□ 1.32
SYVN1-202ENST00000307289 CFDP1Q9UEE9 299 aaPredicted RBP23.28■■□□□ 1.32
SYVN1-202ENST00000307289 L3MBTL2Q969R5 705 aa23.26■■□□□ 1.31
SYVN1-202ENST00000307289 KIF14Q15058 1648 aa23.24■■□□□ 1.31
SYVN1-202ENST00000307289 TROQ12816 1431 aaPredicted RBP23.23■■□□□ 1.31
SYVN1-202ENST00000307289 AKNAQ7Z591 1439 aa23.23■■□□□ 1.31
SYVN1-202ENST00000307289 NUP160Q12769 1436 aa23.22■■□□□ 1.31
SYVN1-202ENST00000307289 HSPA5P11021 654 aaKnown RBP23.21■■□□□ 1.31
SYVN1-202ENST00000307289 SLC4A1APQ9BWU0 796 aaKnown RBP23.2■■□□□ 1.3
SYVN1-202ENST00000307289 DNMT1P26358 1616 aaKnown RBP23.19■■□□□ 1.3
SYVN1-202ENST00000307289 SUPT16HQ9Y5B9 1047 aaKnown RBP23.19■■□□□ 1.3
SYVN1-202ENST00000307289 GPATCH8Q9UKJ3 1502 aaKnown RBP23.19■■□□□ 1.3
SYVN1-202ENST00000307289 ANP32CO43423 234 aa23.18■■□□□ 1.3
SYVN1-202ENST00000307289 CAMSAP2Q08AD1 1489 aa23.18■■□□□ 1.3
SYVN1-202ENST00000307289 CARMIL2Q6F5E8 1435 aa23.18■■□□□ 1.3
SYVN1-202ENST00000307289 PELP1Q8IZL8 1130 aaKnown RBP23.17■■□□□ 1.3
SYVN1-202ENST00000307289 NBPF8Q3BBV2 869 aa23.16■■□□□ 1.3
SYVN1-202ENST00000307289 ROCK1Q13464 1354 aa23.16■■□□□ 1.3
SYVN1-202ENST00000307289 WASHC2AQ641Q2 1341 aa23.15■■□□□ 1.3
SYVN1-202ENST00000307289 ANKRD30BQ9BXX2 1392 aa23.15■■□□□ 1.3
SYVN1-202ENST00000307289 C11orf95C9JLR9 678 aaPredicted RBP23.14■■□□□ 1.29
SYVN1-202ENST00000307289 PLEKHD1A6NEE1 506 aa23.12■■□□□ 1.29
SYVN1-202ENST00000307289 ATP10BO94823 1461 aa23.11■■□□□ 1.29
SYVN1-202ENST00000307289 NCOA1Q15788 1441 aa23.1■■□□□ 1.29
SYVN1-202ENST00000307289 EIF4G2P78344 907 aaKnown RBP eCLIP23.07■■□□□ 1.28
SYVN1-202ENST00000307289 PZPP20742 1482 aa23.06■■□□□ 1.28
SYVN1-202ENST00000307289 HNRNPMP52272 730 aaKnown RBP eCLIP23.05■■□□□ 1.28
SYVN1-202ENST00000307289 RPRD2Q5VT52 1461 aaKnown RBP23.04■■□□□ 1.28
SYVN1-202ENST00000307289 CCER2I3L3R5 266 aa23.04■■□□□ 1.28
SYVN1-202ENST00000307289 ABCA8O94911 1581 aa23.04■■□□□ 1.28
SYVN1-202ENST00000307289 BCANQ96GW7 911 aa23.04■■□□□ 1.28
SYVN1-202ENST00000307289 PKD2Q13563 968 aa23.02■■□□□ 1.28
SYVN1-202ENST00000307289 ZNF326Q5BKZ1 582 aaKnown RBP23.02■■□□□ 1.28
SYVN1-202ENST00000307289 TEX14Q8IWB6 1497 aa23.01■■□□□ 1.27
SYVN1-202ENST00000307289 PTPRGP23470 1445 aa23■■□□□ 1.27
SYVN1-202ENST00000307289 CCDC184Q52MB2 194 aa22.99■■□□□ 1.27
SYVN1-202ENST00000307289 ABCC10Q5T3U5 1492 aa22.99■■□□□ 1.27
SYVN1-202ENST00000307289 ITSN2Q9NZM3 1697 aa22.99■■□□□ 1.27
SYVN1-202ENST00000307289 ADCY10Q96PN6 1610 aa22.99■■□□□ 1.27
SYVN1-202ENST00000307289 CDC42BPAQ5VT25 1732 aa22.97■■□□□ 1.27
SYVN1-202ENST00000307289 ANKRD30AQ9BXX3 1397 aa22.96■■□□□ 1.27
SYVN1-202ENST00000307289 ANKRD50Q9ULJ7 1429 aa22.96■■□□□ 1.27
SYVN1-202ENST00000307289 CNGB1Q14028 1251 aaPredicted RBP22.94■■□□□ 1.26
SYVN1-202ENST00000307289 FKBP8Q14318 412 aa22.94■■□□□ 1.26
SYVN1-202ENST00000307289 C9orf84Q5VXU9 1444 aa22.92■■□□□ 1.26
SYVN1-202ENST00000307289 NUP155O75694 1391 aa22.92■■□□□ 1.26
SYVN1-202ENST00000307289 ADGRL2O95490 1459 aa22.92■■□□□ 1.26
SYVN1-202ENST00000307289 CROCC2H7BZ55 1655 aa22.91■■□□□ 1.26
SYVN1-202ENST00000307289 ADGBQ8N7X0 1667 aa22.91■■□□□ 1.26
SYVN1-202ENST00000307289 ERCC6L2Q5T890 1561 aa22.9■■□□□ 1.26
SYVN1-202ENST00000307289 CCDC7Q96M83 1385 aa22.9■■□□□ 1.26
SYVN1-202ENST00000307289 TSPY4P0CV99 314 aa22.9■■□□□ 1.26
SYVN1-202ENST00000307289 TSPY10P0CW01 314 aa22.9■■□□□ 1.26
SYVN1-202ENST00000307289 KIAA1107Q9UPP5 1409 aa22.9■■□□□ 1.26
SYVN1-202ENST00000307289 CHD1O14646 1710 aa22.89■■□□□ 1.25
SYVN1-202ENST00000307289 KIF7Q2M1P5 1343 aa22.87■■□□□ 1.25
SYVN1-202ENST00000307289 POLR3GLQ9BT43 218 aa22.87■■□□□ 1.25
SYVN1-202ENST00000307289 HNRNPUQ00839 825 aaKnown RBP eCLIP22.87■■□□□ 1.25
SYVN1-202ENST00000307289 SPATA31E1Q6ZUB1 1445 aa22.86■■□□□ 1.25
SYVN1-202ENST00000307289 KDM2AQ9Y2K7 1162 aa22.85■■□□□ 1.25
SYVN1-202ENST00000307289 KIF15Q9NS87 1388 aa22.85■■□□□ 1.25
SYVN1-202ENST00000307289 CNTLNQ9NXG0 1405 aa22.84■■□□□ 1.25
SYVN1-202ENST00000307289 MBD5Q9P267 1494 aa22.83■■□□□ 1.25
SYVN1-202ENST00000307289 PRKRIP1Q9H875 184 aaPredicted RBP22.8■■□□□ 1.24
SYVN1-202ENST00000307289 SAMD9LQ8IVG5 1584 aa22.79■■□□□ 1.24
SYVN1-202ENST00000307289 FAM9BQ8IZU0 186 aa22.78■■□□□ 1.24
SYVN1-202ENST00000307289 CDC42BPBQ9Y5S2 1711 aa22.78■■□□□ 1.24
SYVN1-202ENST00000307289 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.77■■□□□ 1.246e-6■□□□□ 11.2
SYVN1-202ENST00000307289 SHANK2Q9UPX8 1470 aa22.76■■□□□ 1.23
SYVN1-202ENST00000307289 USP47Q96K76 1375 aa22.75■■□□□ 1.23
SYVN1-202ENST00000307289 TTC37Q6PGP7 1564 aa22.75■■□□□ 1.23
SYVN1-202ENST00000307289 IRX6P78412 446 aaPredicted RBP22.74■■□□□ 1.23
SYVN1-202ENST00000307289 DCAF11Q8TEB1 546 aa22.74■■□□□ 1.23
SYVN1-202ENST00000307289 SENP3-EIF4A1A0A087X0R7 540 aa22.73■■□□□ 1.23
SYVN1-202ENST00000307289 MRS2Q9HD23 443 aa22.72■■□□□ 1.23
SYVN1-202ENST00000307289 SYCP2Q9BX26 1530 aa22.72■■□□□ 1.23
SYVN1-202ENST00000307289 BCORL1Q5H9F3 1711 aa22.71■■□□□ 1.23
SYVN1-202ENST00000307289 CCDC141Q6ZP82 1450 aa22.71■■□□□ 1.23
SYVN1-202ENST00000307289 ARHGAP5Q13017 1502 aa22.7■■□□□ 1.23
SYVN1-202ENST00000307289 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.7■■□□□ 1.23
SYVN1-202ENST00000307289 TSHZ2Q9NRE2 1034 aa22.7■■□□□ 1.22
SYVN1-202ENST00000307289 RGL3Q3MIN7 710 aa22.7■■□□□ 1.22
SYVN1-202ENST00000307289 PREX2Q70Z35 1606 aa22.69■■□□□ 1.22
SYVN1-202ENST00000307289 CARD11Q9BXL7 1154 aa22.68■■□□□ 1.22
SYVN1-202ENST00000307289 ARHGEF5Q12774 1597 aa22.67■■□□□ 1.22
SYVN1-202ENST00000307289 SHROOM2Q13796 1616 aa22.67■■□□□ 1.22
SYVN1-202ENST00000307289 NEFLP07196 543 aa22.67■■□□□ 1.22
SYVN1-202ENST00000307289 ST20-MTHFSA0A0A6YYL1 179 aa22.65■■□□□ 1.22
SYVN1-202ENST00000307289 ARHGEF12Q9NZN5 1544 aa22.64■■□□□ 1.21
SYVN1-202ENST00000307289 FAM135AQ9P2D6 1515 aa22.64■■□□□ 1.21
SYVN1-202ENST00000307289 ABCC2Q92887 1545 aa22.63■■□□□ 1.21
SYVN1-202ENST00000307289 DHX29Q7Z478 1369 aaKnown RBP22.62■■□□□ 1.21
SYVN1-202ENST00000307289 PLEKHH2Q8IVE3 1493 aa22.62■■□□□ 1.21
SYVN1-202ENST00000307289 KDM5DQ9BY66 1539 aa22.61■■□□□ 1.21
SYVN1-202ENST00000307289 KDM5CP41229 1560 aa22.61■■□□□ 1.21
SYVN1-202ENST00000307289 NBPF1Q3BBV0 1214 aa22.59■■□□□ 1.21
SYVN1-202ENST00000307289 UHRF1BP1Q6BDS2 1440 aa22.59■■□□□ 1.21
SYVN1-202ENST00000307289 PLA2R1Q13018 1463 aa22.58■■□□□ 1.2
SYVN1-202ENST00000307289 RSPH4AQ5TD94 716 aa22.58■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms