RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 L3MBTL2Q969R5 705 aa24.48■■□□□ 1.51
RETREG1-201ENST00000306320 SLC4A1APQ9BWU0 796 aaKnown RBP24.48■■□□□ 1.51
RETREG1-201ENST00000306320 HFM1A2PYH4 1435 aa24.46■■□□□ 1.51
RETREG1-201ENST00000306320 TARBP1Q13395 1621 aaKnown RBP24.46■■□□□ 1.51
RETREG1-201ENST00000306320 MRS2Q9HD23 443 aa24.45■■□□□ 1.51
RETREG1-201ENST00000306320 LAS1LQ9Y4W2 734 aaKnown RBP24.45■■□□□ 1.51
RETREG1-201ENST00000306320 ANP32AP39687 249 aaKnown RBP24.45■■□□□ 1.5
RETREG1-201ENST00000306320 MRC2Q9UBG0 1479 aa24.44■■□□□ 1.5
RETREG1-201ENST00000306320 CFDP1Q9UEE9 299 aaPredicted RBP24.44■■□□□ 1.5
RETREG1-201ENST00000306320 UACAQ9BZF9 1416 aa24.44■■□□□ 1.5
RETREG1-201ENST00000306320 EPRSP07814 1512 aaKnown RBP24.44■■□□□ 1.5
RETREG1-201ENST00000306320 ZBTB47Q9UFB7 747 aaPredicted RBP24.42■■□□□ 1.5
RETREG1-201ENST00000306320 THOC2Q8NI27 1593 aaKnown RBP24.42■■□□□ 1.5
RETREG1-201ENST00000306320 SAMD9Q5K651 1589 aa24.41■■□□□ 1.5
RETREG1-201ENST00000306320 PTPN23Q9H3S7 1636 aa24.39■■□□□ 1.5
RETREG1-201ENST00000306320 PRG4Q92954 1404 aaPredicted RBP24.39■■□□□ 1.5
RETREG1-201ENST00000306320 IQGAP2Q13576 1575 aa24.39■■□□□ 1.5
RETREG1-201ENST00000306320 EIF5BO60841 1220 aaKnown RBP24.39■■□□□ 1.49
RETREG1-201ENST00000306320 MYT1LQ9UL68 1186 aa24.37■■□□□ 1.49
RETREG1-201ENST00000306320 JPH4Q96JJ6 628 aa24.37■■□□□ 1.49
RETREG1-201ENST00000306320 KDM6BO15054 1643 aa24.37■■□□□ 1.49
RETREG1-201ENST00000306320 C11orf95C9JLR9 678 aaPredicted RBP24.36■■□□□ 1.49
RETREG1-201ENST00000306320 SUPT6HQ7KZ85 1726 aaKnown RBP24.36■■□□□ 1.49
RETREG1-201ENST00000306320 EHBP1L1Q8N3D4 1523 aa24.34■■□□□ 1.49
RETREG1-201ENST00000306320 NBPF8Q3BBV2 869 aa24.34■■□□□ 1.49
RETREG1-201ENST00000306320 TIMELESSQ9UNS1 1208 aa24.34■■□□□ 1.49
RETREG1-201ENST00000306320 KDM2AQ9Y2K7 1162 aa24.34■■□□□ 1.49
RETREG1-201ENST00000306320 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.34■■□□□ 1.49
RETREG1-201ENST00000306320 PLB1Q6P1J6 1458 aa24.33■■□□□ 1.48
RETREG1-201ENST00000306320 WASHC2AQ641Q2 1341 aa24.32■■□□□ 1.48
RETREG1-201ENST00000306320 UGGT2Q9NYU1 1516 aa24.31■■□□□ 1.48
RETREG1-201ENST00000306320 EIF4G2P78344 907 aaKnown RBP eCLIP24.31■■□□□ 1.48
RETREG1-201ENST00000306320 PBRM1Q86U86 1689 aa24.3■■□□□ 1.48
RETREG1-201ENST00000306320 ADAMTS12P58397 1594 aa24.27■■□□□ 1.48
RETREG1-201ENST00000306320 HNRNPMP52272 730 aaKnown RBP eCLIP24.26■■□□□ 1.47
RETREG1-201ENST00000306320 PKD2Q13563 968 aa24.23■■□□□ 1.47
RETREG1-201ENST00000306320 IFT140Q96RY7 1462 aa24.23■■□□□ 1.47
RETREG1-201ENST00000306320 HECW1Q76N89 1606 aa24.23■■□□□ 1.47
RETREG1-201ENST00000306320 PLEKHD1A6NEE1 506 aa24.23■■□□□ 1.47
RETREG1-201ENST00000306320 NEFMP07197 916 aa24.23■■□□□ 1.47
RETREG1-201ENST00000306320 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.22■■□□□ 1.47
RETREG1-201ENST00000306320 DISP1Q96F81 1524 aa24.22■■□□□ 1.47
RETREG1-201ENST00000306320 NUP153P49790 1475 aaKnown RBP24.21■■□□□ 1.47
RETREG1-201ENST00000306320 DENND4BO75064 1496 aaPredicted RBP24.21■■□□□ 1.47
RETREG1-201ENST00000306320 GRIN2AQ12879 1464 aa24.2■■□□□ 1.46
RETREG1-201ENST00000306320 ABCC5O15440 1437 aa24.2■■□□□ 1.46
RETREG1-201ENST00000306320 IPO9Q96P70 1041 aaKnown RBP24.19■■□□□ 1.46
RETREG1-201ENST00000306320 WDR62O43379 1518 aa24.18■■□□□ 1.46
RETREG1-201ENST00000306320 DAPK1P53355 1430 aa24.18■■□□□ 1.46
RETREG1-201ENST00000306320 KIAA0586Q9BVV6 1533 aa24.18■■□□□ 1.46
RETREG1-201ENST00000306320 RGL3Q3MIN7 710 aa24.15■■□□□ 1.46
RETREG1-201ENST00000306320 EIF4G3O43432 1585 aaKnown RBP24.12■■□□□ 1.45
RETREG1-201ENST00000306320 AKNAQ7Z591 1439 aa24.12■■□□□ 1.45
RETREG1-201ENST00000306320 ARHGEF11O15085 1522 aa24.09■■□□□ 1.45
RETREG1-201ENST00000306320 TSPY4P0CV99 314 aa24.09■■□□□ 1.45
RETREG1-201ENST00000306320 TSPY10P0CW01 314 aa24.09■■□□□ 1.45
RETREG1-201ENST00000306320 KIAA0556O60303 1618 aa24.08■■□□□ 1.45
RETREG1-201ENST00000306320 MIA2Q96PC5 1412 aa24.07■■□□□ 1.44
RETREG1-201ENST00000306320 PRKRIP1Q9H875 184 aaPredicted RBP24.06■■□□□ 1.44
RETREG1-201ENST00000306320 TCOF1Q13428 1488 aaKnown RBP24.06■■□□□ 1.44
RETREG1-201ENST00000306320 NUP155O75694 1391 aa24.05■■□□□ 1.44
RETREG1-201ENST00000306320 ANKRD30BQ9BXX2 1392 aa24.05■■□□□ 1.44
RETREG1-201ENST00000306320 KDM5BQ9UGL1 1544 aa24.04■■□□□ 1.44
RETREG1-201ENST00000306320 DCAF11Q8TEB1 546 aa24.03■■□□□ 1.44
RETREG1-201ENST00000306320 BRPF3Q9ULD4 1205 aa24.03■■□□□ 1.44
RETREG1-201ENST00000306320 KIF7Q2M1P5 1343 aa24.02■■□□□ 1.44
RETREG1-201ENST00000306320 SKAP1Q86WV1 359 aa24.02■■□□□ 1.44
RETREG1-201ENST00000306320 TROQ12816 1431 aaPredicted RBP24.02■■□□□ 1.44
RETREG1-201ENST00000306320 SLC4A3P48751 1232 aa24.02■■□□□ 1.44
RETREG1-201ENST00000306320 CARMIL2Q6F5E8 1435 aa24.01■■□□□ 1.43
RETREG1-201ENST00000306320 ERICH6BQ5W0A0 696 aa24.01■■□□□ 1.43
RETREG1-201ENST00000306320 CEP170Q5SW79 1584 aa24.01■■□□□ 1.43
RETREG1-201ENST00000306320 CAMSAP2Q08AD1 1489 aa24■■□□□ 1.43
RETREG1-201ENST00000306320 RAPGEF6Q8TEU7 1601 aa23.99■■□□□ 1.43
RETREG1-201ENST00000306320 KIF14Q15058 1648 aa23.99■■□□□ 1.43
RETREG1-201ENST00000306320 GPATCH8Q9UKJ3 1502 aaKnown RBP23.98■■□□□ 1.43
RETREG1-201ENST00000306320 CCDC7Q96M83 1385 aa23.97■■□□□ 1.43
RETREG1-201ENST00000306320 SYNJ2O15056 1496 aa23.96■■□□□ 1.43
RETREG1-201ENST00000306320 CARD11Q9BXL7 1154 aa23.96■■□□□ 1.43
RETREG1-201ENST00000306320 ZBED9Q6R2W3 1325 aa23.96■■□□□ 1.43
RETREG1-201ENST00000306320 NCOA1Q15788 1441 aa23.95■■□□□ 1.42
RETREG1-201ENST00000306320 DAXXQ9UER7 740 aaPredicted RBP23.95■■□□□ 1.42
RETREG1-201ENST00000306320 ARXQ96QS3 562 aa23.94■■□□□ 1.42
RETREG1-201ENST00000306320 ANKRD30AQ9BXX3 1397 aa23.92■■□□□ 1.42
RETREG1-201ENST00000306320 PTPRGP23470 1445 aa23.92■■□□□ 1.42
RETREG1-201ENST00000306320 ANKRD50Q9ULJ7 1429 aa23.91■■□□□ 1.42
RETREG1-201ENST00000306320 ST20-MTHFSA0A0A6YYL1 179 aa23.89■■□□□ 1.42
RETREG1-201ENST00000306320 TMC1Q8TDI8 760 aa23.89■■□□□ 1.42
RETREG1-201ENST00000306320 EXOC6Q8TAG9 804 aa23.88■■□□□ 1.41
RETREG1-201ENST00000306320 ATP10BO94823 1461 aa23.88■■□□□ 1.41
RETREG1-201ENST00000306320 RPRD2Q5VT52 1461 aaKnown RBP23.87■■□□□ 1.41
RETREG1-201ENST00000306320 NUDCQ9Y266 331 aa23.87■■□□□ 1.41
RETREG1-201ENST00000306320 MAGI1Q96QZ7 1491 aaPredicted RBP23.87■■□□□ 1.41
RETREG1-201ENST00000306320 ROCK1Q13464 1354 aa23.87■■□□□ 1.41
RETREG1-201ENST00000306320 PZPP20742 1482 aa23.86■■□□□ 1.41
RETREG1-201ENST00000306320 USP47Q96K76 1375 aa23.85■■□□□ 1.41
RETREG1-201ENST00000306320 CNTLNQ9NXG0 1405 aa23.85■■□□□ 1.41
RETREG1-201ENST00000306320 GCC2Q8IWJ2 1684 aa23.85■■□□□ 1.41
RETREG1-201ENST00000306320 SENP3Q9H4L4 574 aaPredicted RBP23.84■■□□□ 1.41
RETREG1-201ENST00000306320 KIF15Q9NS87 1388 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms