RNA–Protein interactions for RNA: ENST00000302558.7

RGPD8-201, Transcript of RANBP2-like and GRIP domain containing 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD8, Length 5,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD8-201ENST00000302558 APBB1O00213 710 aa20.42■□□□□ 0.86
RGPD8-201ENST00000302558 EIF4G1Q04637 1599 aaKnown RBP20.42■□□□□ 0.86
RGPD8-201ENST00000302558 SETD5Q9C0A6 1442 aa20.41■□□□□ 0.86
RGPD8-201ENST00000302558 ERCC6Q03468 1493 aa20.41■□□□□ 0.86
RGPD8-201ENST00000302558 STK26Q9P289 416 aa20.4■□□□□ 0.86
RGPD8-201ENST00000302558 RTF1Q92541 710 aaKnown RBP20.4■□□□□ 0.86
RGPD8-201ENST00000302558 HDGFP51858 240 aaKnown RBP20.39■□□□□ 0.86
RGPD8-201ENST00000302558 KTN1Q86UP2 1357 aaKnown RBP20.39■□□□□ 0.85
RGPD8-201ENST00000302558 SOGA1O94964 1423 aa20.39■□□□□ 0.85
RGPD8-201ENST00000302558 DEKP35659 375 aaKnown RBP20.38■□□□□ 0.85
RGPD8-201ENST00000302558 GGT6Q6P531 493 aa20.38■□□□□ 0.85
RGPD8-201ENST00000302558 L1TD1Q5T7N2 865 aaKnown RBP20.37■□□□□ 0.85
RGPD8-201ENST00000302558 CUX2O14529 1486 aa20.37■□□□□ 0.85
RGPD8-201ENST00000302558 MSNP26038 577 aaKnown RBP20.36■□□□□ 0.85
RGPD8-201ENST00000302558 CHAF1AQ13111 956 aaPredicted RBP20.36■□□□□ 0.85
RGPD8-201ENST00000302558 IPO8O15397 1037 aaKnown RBP20.35■□□□□ 0.85
RGPD8-201ENST00000302558 RCAN3Q9UKA8 241 aa20.35■□□□□ 0.85
RGPD8-201ENST00000302558 U2AF1L5P0DN76 240 aaPredicted RBP20.34■□□□□ 0.85
RGPD8-201ENST00000302558 U2AF1Q01081 240 aaKnown RBP eCLIP20.34■□□□□ 0.85
RGPD8-201ENST00000302558 KANK4Q5T7N3 995 aaPredicted RBP20.34■□□□□ 0.85
RGPD8-201ENST00000302558 HDGFL2Q7Z4V5 671 aaPredicted RBP20.34■□□□□ 0.85
RGPD8-201ENST00000302558 DRC7Q8IY82 874 aa20.34■□□□□ 0.85
RGPD8-201ENST00000302558 CFAP44Q96MT7 982 aa20.33■□□□□ 0.84
RGPD8-201ENST00000302558 ARHGAP35Q9NRY4 1499 aa20.31■□□□□ 0.84
RGPD8-201ENST00000302558 ITPRIPQ8IWB1 547 aa20.3■□□□□ 0.84
RGPD8-201ENST00000302558 KIAA1211Q6ZU35 1233 aa20.3■□□□□ 0.84
RGPD8-201ENST00000302558 NACADO15069 1562 aa20.29■□□□□ 0.84
RGPD8-201ENST00000302558 RWDD1Q9H446 243 aaPredicted RBP20.28■□□□□ 0.84
RGPD8-201ENST00000302558 SLKQ9H2G2 1235 aaPredicted RBP20.28■□□□□ 0.84
RGPD8-201ENST00000302558 ROCK2O75116 1388 aaKnown RBP20.28■□□□□ 0.84
RGPD8-201ENST00000302558 MPHOSPH9Q99550 1183 aa20.27■□□□□ 0.84
RGPD8-201ENST00000302558 VPS8Q8N3P4 1428 aa20.27■□□□□ 0.84
RGPD8-201ENST00000302558 RALBP1Q15311 655 aa20.27■□□□□ 0.84
RGPD8-201ENST00000302558 ISY1Q9ULR0 285 aaKnown RBP20.27■□□□□ 0.84
RGPD8-201ENST00000302558 GNL2Q13823 731 aaKnown RBP20.27■□□□□ 0.83
RGPD8-201ENST00000302558 GZF1Q9H116 711 aaPredicted RBP20.26■□□□□ 0.83
RGPD8-201ENST00000302558 BAZ1AQ9NRL2 1556 aaPredicted RBP20.25■□□□□ 0.83
RGPD8-201ENST00000302558 PAK3O75914 559 aaPredicted RBP20.25■□□□□ 0.83
RGPD8-201ENST00000302558 TRHP20396 242 aaPredicted RBP20.25■□□□□ 0.83
RGPD8-201ENST00000302558 GBP4Q96PP9 640 aa20.25■□□□□ 0.83
RGPD8-201ENST00000302558 CALD1Q05682 793 aaKnown RBP20.24■□□□□ 0.83
RGPD8-201ENST00000302558 CECR2Q9BXF3 1484 aa20.24■□□□□ 0.83
RGPD8-201ENST00000302558 NUP155O75694 1391 aa20.24■□□□□ 0.83
RGPD8-201ENST00000302558 RAB3GAP2Q9H2M9 1393 aa20.23■□□□□ 0.83
RGPD8-201ENST00000302558 TCERG1O14776 1098 aaKnown RBP20.23■□□□□ 0.83
RGPD8-201ENST00000302558 CLSTN1O94985 981 aa20.22■□□□□ 0.83
RGPD8-201ENST00000302558 ZNF330Q9Y3S2 320 aaPredicted RBP20.22■□□□□ 0.83
RGPD8-201ENST00000302558 MFAP1P55081 439 aaKnown RBP20.19■□□□□ 0.82
RGPD8-201ENST00000302558 CSB-PGBD3P0DP91 1061 aa20.18■□□□□ 0.82
RGPD8-201ENST00000302558 SMC4Q9NTJ3 1288 aa20.17■□□□□ 0.82
RGPD8-201ENST00000302558 PMFBP1Q8TBY8 1022 aa20.16■□□□□ 0.82
RGPD8-201ENST00000302558 CLUAP1Q96AJ1 413 aa20.16■□□□□ 0.82
RGPD8-201ENST00000302558 STK31Q9BXU1 1019 aa20.15■□□□□ 0.82
RGPD8-201ENST00000302558 PTMSP20962 102 aa20.15■□□□□ 0.82
RGPD8-201ENST00000302558 KIAA2012Q0VF49 1180 aa20.14■□□□□ 0.82
RGPD8-201ENST00000302558 CCDC146Q8IYE0 955 aa20.14■□□□□ 0.82
RGPD8-201ENST00000302558 EFCAB2Q5VUJ9 269 aa20.13■□□□□ 0.81
RGPD8-201ENST00000302558 ANKRD30AQ9BXX3 1397 aa20.13■□□□□ 0.81
RGPD8-201ENST00000302558 L3MBTL2Q969R5 705 aa20.13■□□□□ 0.81
RGPD8-201ENST00000302558 CARMIL2Q6F5E8 1435 aa20.12■□□□□ 0.81
RGPD8-201ENST00000302558 NCBP3Q53F19 620 aaKnown RBP20.12■□□□□ 0.81
RGPD8-201ENST00000302558 SPAG9O60271 1321 aaKnown RBP20.11■□□□□ 0.81
RGPD8-201ENST00000302558 TRIM6-TRIM34B2RNG4 842 aa20.11■□□□□ 0.81
RGPD8-201ENST00000302558 KIF3BO15066 747 aa20.1■□□□□ 0.81
RGPD8-201ENST00000302558 HTATSF1O43719 755 aaKnown RBP20.1■□□□□ 0.81
RGPD8-201ENST00000302558 GORABQ5T7V8 394 aa20.1■□□□□ 0.81
RGPD8-201ENST00000302558 SLC4A10Q6U841 1118 aa20.09■□□□□ 0.81
RGPD8-201ENST00000302558 SYAP1Q96A49 352 aaPredicted RBP20.09■□□□□ 0.81
RGPD8-201ENST00000302558 EIF3AQ14152 1382 aaKnown RBP20.09■□□□□ 0.81
RGPD8-201ENST00000302558 CHMP3Q9Y3E7 222 aa20.09■□□□□ 0.81
RGPD8-201ENST00000302558 TSHZ2Q9NRE2 1034 aa20.09■□□□□ 0.81
RGPD8-201ENST00000302558 NLRP13Q86W25 1043 aa20.08■□□□□ 0.81
RGPD8-201ENST00000302558 TERF2IPQ9NYB0 399 aa20.08■□□□□ 0.81
RGPD8-201ENST00000302558 ARID3AQ99856 593 aa20.08■□□□□ 0.8
RGPD8-201ENST00000302558 HMMRO75330 724 aa20.08■□□□□ 0.8
RGPD8-201ENST00000302558 IPO9Q96P70 1041 aaKnown RBP20.08■□□□□ 0.8
RGPD8-201ENST00000302558 NUTM2DQ5VT03 806 aaPredicted RBP20.08■□□□□ 0.8
RGPD8-201ENST00000302558 CENPJQ9HC77 1338 aaPredicted RBP20.07■□□□□ 0.8
RGPD8-201ENST00000302558 ABCC8Q09428 1581 aa20.07■□□□□ 0.8
RGPD8-201ENST00000302558 FOXD4L1Q9NU39 408 aa20.07■□□□□ 0.8
RGPD8-201ENST00000302558 FMN1Q68DA7 1419 aa20.07■□□□□ 0.8
RGPD8-201ENST00000302558 CHMP4AQ9BY43 222 aa20.06■□□□□ 0.8
RGPD8-201ENST00000302558 HNRNPMP52272 730 aaKnown RBP eCLIP20.06■□□□□ 0.8
RGPD8-201ENST00000302558 TDRD9Q8NDG6 1382 aaKnown RBP20.06■□□□□ 0.8
RGPD8-201ENST00000302558 NOL8Q76FK4 1167 aaKnown RBP20.06■□□□□ 0.8
RGPD8-201ENST00000302558 GOLGA6L3A6NEY3 463 aa20.05■□□□□ 0.8
RGPD8-201ENST00000302558 GPATCH3Q96I76 525 aa20.05■□□□□ 0.8
RGPD8-201ENST00000302558 HSP90B1P14625 803 aaKnown RBP20.04■□□□□ 0.8
RGPD8-201ENST00000302558 AMER1Q5JTC6 1135 aaPredicted RBP20.04■□□□□ 0.8
RGPD8-201ENST00000302558 PDE3BQ13370 1112 aa20.03■□□□□ 0.8
RGPD8-201ENST00000302558 TAF7LQ5H9L4 462 aa20.03■□□□□ 0.8
RGPD8-201ENST00000302558 CCDC88BA6NC98 1476 aa20.03■□□□□ 0.8
RGPD8-201ENST00000302558 HDAC5Q9UQL6 1122 aa20.01■□□□□ 0.79
RGPD8-201ENST00000302558 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20■□□□□ 0.79
RGPD8-201ENST00000302558 NGDNQ8NEJ9 315 aaKnown RBP20■□□□□ 0.79
RGPD8-201ENST00000302558 TPM4P67936 248 aa19.99■□□□□ 0.79
RGPD8-201ENST00000302558 RRP7AQ9Y3A4 280 aaKnown RBP19.99■□□□□ 0.79
RGPD8-201ENST00000302558 LTV1Q96GA3 475 aaPredicted RBP19.98■□□□□ 0.79
RGPD8-201ENST00000302558 AMPHP49418 695 aa19.98■□□□□ 0.79
RGPD8-201ENST00000302558 LMOD3Q0VAK6 560 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms