RNA–Protein interactions for RNA: ENST00000300843.8

MARK4-202, Transcript of microtubule affinity regulating kinase 4, humanhuman

TSL 1 (best) BASIC

Gene MARK4, Length 5,209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK4-202ENST00000300843 RSPH4AQ5TD94 716 aa19.83■□□□□ 0.76
MARK4-202ENST00000300843 FRAT1Q92837 279 aaPredicted RBP19.82■□□□□ 0.76
MARK4-202ENST00000300843 MORC1Q86VD1 984 aa19.82■□□□□ 0.76
MARK4-202ENST00000300843 CASC1Q6TDU7 716 aa19.81■□□□□ 0.76
MARK4-202ENST00000300843 CCDC18Q5T9S5 1454 aa19.81■□□□□ 0.76
MARK4-202ENST00000300843 JPH4Q96JJ6 628 aa19.79■□□□□ 0.76
MARK4-202ENST00000300843 FANCD2Q9BXW9 1451 aa19.78■□□□□ 0.76
MARK4-202ENST00000300843 ROCK2O75116 1388 aaKnown RBP19.77■□□□□ 0.76
MARK4-202ENST00000300843 KTN1Q86UP2 1357 aaKnown RBP19.77■□□□□ 0.76
MARK4-202ENST00000300843 ARXQ96QS3 562 aa19.77■□□□□ 0.76
MARK4-202ENST00000300843 SAFB2Q14151 953 aaKnown RBP eCLIP19.76■□□□□ 0.75
MARK4-202ENST00000300843 ANP32EQ9BTT0 268 aa19.76■□□□□ 0.75
MARK4-202ENST00000300843 NCLP19338 710 aaKnown RBP19.76■□□□□ 0.75
MARK4-202ENST00000300843 GOLGA6L22H0YM25 854 aa19.75■□□□□ 0.75
MARK4-202ENST00000300843 HNRNPMP52272 730 aaKnown RBP eCLIP19.75■□□□□ 0.75
MARK4-202ENST00000300843 HDGFL2Q7Z4V5 671 aaPredicted RBP19.74■□□□□ 0.75
MARK4-202ENST00000300843 STK26Q9P289 416 aa19.73■□□□□ 0.75
MARK4-202ENST00000300843 KIF3BO15066 747 aa19.73■□□□□ 0.75
MARK4-202ENST00000300843 SPAG9O60271 1321 aaKnown RBP19.71■□□□□ 0.75
MARK4-202ENST00000300843 RGS3P49796 1198 aa19.71■□□□□ 0.75
MARK4-202ENST00000300843 RALBP1Q15311 655 aa19.7■□□□□ 0.74
MARK4-202ENST00000300843 EIF3AQ14152 1382 aaKnown RBP19.68■□□□□ 0.74
MARK4-202ENST00000300843 L3MBTL2Q969R5 705 aa19.68■□□□□ 0.74
MARK4-202ENST00000300843 RUSC2Q8N2Y8 1516 aa19.68■□□□□ 0.74
MARK4-202ENST00000300843 SOX12O15370 315 aa19.66■□□□□ 0.74
MARK4-202ENST00000300843 B4GALNT3Q6L9W6 998 aa19.65■□□□□ 0.74
MARK4-202ENST00000300843 OS9Q13438 667 aaPredicted RBP19.62■□□□□ 0.73
MARK4-202ENST00000300843 RTF1Q92541 710 aaKnown RBP19.61■□□□□ 0.73
MARK4-202ENST00000300843 WASHC2CQ9Y4E1 1318 aa19.6■□□□□ 0.73
MARK4-202ENST00000300843 PTPRGP23470 1445 aa19.6■□□□□ 0.73
MARK4-202ENST00000300843 U2AF1L5P0DN76 240 aaPredicted RBP19.58■□□□□ 0.73
MARK4-202ENST00000300843 U2AF1Q01081 240 aaKnown RBP eCLIP19.58■□□□□ 0.73
MARK4-202ENST00000300843 ZRSR1Q15695 479 aaKnown RBP19.58■□□□□ 0.73
MARK4-202ENST00000300843 NPHP1O15259 732 aa19.58■□□□□ 0.72
MARK4-202ENST00000300843 CALD1Q05682 793 aaKnown RBP19.58■□□□□ 0.72
MARK4-202ENST00000300843 FGD5Q6ZNL6 1462 aa19.57■□□□□ 0.72
MARK4-202ENST00000300843 IGF1RP08069 1367 aa19.57■□□□□ 0.72
MARK4-202ENST00000300843 NCAPD3P42695 1498 aa19.56■□□□□ 0.72
MARK4-202ENST00000300843 IPO8O15397 1037 aaKnown RBP19.56■□□□□ 0.72
MARK4-202ENST00000300843 ERICH6BQ5W0A0 696 aa19.56■□□□□ 0.72
MARK4-202ENST00000300843 CYB5RLQ6IPT4 315 aa19.56■□□□□ 0.72
MARK4-202ENST00000300843 TRIM44Q96DX7 344 aaPredicted RBP19.56■□□□□ 0.72
MARK4-202ENST00000300843 GAPVD1Q14C86 1478 aa19.55■□□□□ 0.72
MARK4-202ENST00000300843 TERF2IPQ9NYB0 399 aa19.55■□□□□ 0.72
MARK4-202ENST00000300843 DHX57Q6P158 1386 aaKnown RBP19.54■□□□□ 0.72
MARK4-202ENST00000300843 RCAN3Q9UKA8 241 aa19.53■□□□□ 0.72
MARK4-202ENST00000300843 CCDC144AA2RUR9 1427 aa19.51■□□□□ 0.71
MARK4-202ENST00000300843 PAK3O75914 559 aaPredicted RBP19.51■□□□□ 0.71
MARK4-202ENST00000300843 EID1Q9Y6B2 187 aa19.51■□□□□ 0.71
MARK4-202ENST00000300843 NLRP13Q86W25 1043 aa19.51■□□□□ 0.71
MARK4-202ENST00000300843 NOP58Q9Y2X3 529 aaKnown RBP19.5■□□□□ 0.71
MARK4-202ENST00000300843 HSP90AB1P08238 724 aaKnown RBP19.5■□□□□ 0.71
MARK4-202ENST00000300843 CFAP44Q96MT7 982 aa19.49■□□□□ 0.71
MARK4-202ENST00000300843 KCNJ4P48050 445 aa19.49■□□□□ 0.71
MARK4-202ENST00000300843 RAD54L2Q9Y4B4 1467 aa19.47■□□□□ 0.71
MARK4-202ENST00000300843 FGD1P98174 961 aa19.47■□□□□ 0.71
MARK4-202ENST00000300843 UACAQ9BZF9 1416 aa19.46■□□□□ 0.71
MARK4-202ENST00000300843 CHMP4AQ9BY43 222 aa19.45■□□□□ 0.7
MARK4-202ENST00000300843 NUTM2DQ5VT03 806 aaPredicted RBP19.44■□□□□ 0.7
MARK4-202ENST00000300843 PHLDB1Q86UU1 1377 aa19.44■□□□□ 0.7
MARK4-202ENST00000300843 HSCBQ8IWL3 235 aa19.43■□□□□ 0.7
MARK4-202ENST00000300843 PDE3BQ13370 1112 aa19.43■□□□□ 0.7
MARK4-202ENST00000300843 KIF15Q9NS87 1388 aa19.43■□□□□ 0.7
MARK4-202ENST00000300843 ST20-MTHFSA0A0A6YYL1 179 aa19.43■□□□□ 0.7
MARK4-202ENST00000300843 GOLGA2Q08379 1002 aa19.43■□□□□ 0.7
MARK4-202ENST00000300843 PTMAP06454 111 aaKnown RBP19.42■□□□□ 0.7
MARK4-202ENST00000300843 MCCP23508 829 aa19.42■□□□□ 0.7
MARK4-202ENST00000300843 RWDD1Q9H446 243 aaPredicted RBP19.42■□□□□ 0.7
MARK4-202ENST00000300843 TRAK1Q9UPV9 953 aa19.42■□□□□ 0.7
MARK4-202ENST00000300843 CC2D2AQ9P2K1 1620 aa19.42■□□□□ 0.7
MARK4-202ENST00000300843 MYOM3Q5VTT5 1437 aa19.41■□□□□ 0.7
MARK4-202ENST00000300843 CSB-PGBD3P0DP91 1061 aa19.41■□□□□ 0.7
MARK4-202ENST00000300843 TMX4Q9H1E5 349 aaPredicted RBP19.4■□□□□ 0.7
MARK4-202ENST00000300843 VGFO15240 615 aaPredicted RBP19.39■□□□□ 0.7
MARK4-202ENST00000300843 ITPRIPQ8IWB1 547 aa19.39■□□□□ 0.69
MARK4-202ENST00000300843 NGDNQ8NEJ9 315 aaKnown RBP19.39■□□□□ 0.69
MARK4-202ENST00000300843 TPRNQ4KMQ1 711 aa19.38■□□□□ 0.69
MARK4-202ENST00000300843 MYBBP1AQ9BQG0 1328 aaKnown RBP19.38■□□□□ 0.69
MARK4-202ENST00000300843 STK31Q9BXU1 1019 aa19.36■□□□□ 0.69
MARK4-202ENST00000300843 LMOD3Q0VAK6 560 aa19.36■□□□□ 0.69
MARK4-202ENST00000300843 PANK3Q9H999 370 aa19.36■□□□□ 0.69
MARK4-202ENST00000300843 CUX1P39880 1505 aa19.35■□□□□ 0.69
MARK4-202ENST00000300843 FGD6Q6ZV73 1430 aa19.35■□□□□ 0.69
MARK4-202ENST00000300843 PMFBP1Q8TBY8 1022 aa19.35■□□□□ 0.69
MARK4-202ENST00000300843 SMC4Q9NTJ3 1288 aa19.35■□□□□ 0.69
MARK4-202ENST00000300843 TCERG1O14776 1098 aaKnown RBP19.34■□□□□ 0.69
MARK4-202ENST00000300843 CCDC146Q8IYE0 955 aa19.34■□□□□ 0.69
MARK4-202ENST00000300843 NAP1L2Q9ULW6 460 aaPredicted RBP19.34■□□□□ 0.69
MARK4-202ENST00000300843 USP47Q96K76 1375 aa19.33■□□□□ 0.68
MARK4-202ENST00000300843 MRC2Q9UBG0 1479 aa19.33■□□□□ 0.68
MARK4-202ENST00000300843 APBB1O00213 710 aa19.32■□□□□ 0.68
MARK4-202ENST00000300843 AQRO60306 1485 aaKnown RBP eCLIP19.32■□□□□ 0.682e-7■■■■□ 25.2
MARK4-202ENST00000300843 KIF21BO75037 1637 aa19.32■□□□□ 0.68
MARK4-202ENST00000300843 AMPHP49418 695 aa19.31■□□□□ 0.68
MARK4-202ENST00000300843 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.31■□□□□ 0.68
MARK4-202ENST00000300843 MEX3CQ5U5Q3 659 aaKnown RBP19.31■□□□□ 0.68
MARK4-202ENST00000300843 CENPJQ9HC77 1338 aaPredicted RBP19.31■□□□□ 0.68
MARK4-202ENST00000300843 EVC2Q86UK5 1308 aa19.31■□□□□ 0.68
MARK4-202ENST00000300843 RBM19Q9Y4C8 960 aaKnown RBP19.31■□□□□ 0.68
MARK4-202ENST00000300843 HDAC5Q9UQL6 1122 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms